Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS05075

Experiment: Hypoxanthine 0.7347 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS05065 and A4249_RS05070 are separated by 11 nucleotidesA4249_RS05070 and A4249_RS05075 are separated by 75 nucleotidesA4249_RS05075 and A4249_RS05080 overlap by 2 nucleotides A4249_RS05065: A4249_RS05065 - alpha/beta hydrolase, at 1,045,687 to 1,046,541 _RS05065 A4249_RS05070: A4249_RS05070 - thymidylate synthase, at 1,046,553 to 1,047,410 _RS05070 A4249_RS05075: A4249_RS05075 - DUF924 family protein, at 1,047,486 to 1,048,028 _RS05075 A4249_RS05080: A4249_RS05080 - ketol-acid reductoisomerase, at 1,048,027 to 1,049,061 _RS05080 Position (kb) 1047 1048 1049Strain fitness (log2 ratio) -2 -1 0 1at 1046.554 kb on + strandat 1046.554 kb on + strandat 1046.554 kb on + strandat 1046.555 kb on - strandat 1046.555 kb on - strandat 1047.488 kb on - strandat 1047.546 kb on + strand, within A4249_RS05075at 1047.547 kb on - strand, within A4249_RS05075at 1047.547 kb on - strand, within A4249_RS05075at 1047.547 kb on - strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.649 kb on + strand, within A4249_RS05075at 1047.650 kb on - strand, within A4249_RS05075at 1047.650 kb on - strand, within A4249_RS05075at 1047.650 kb on - strand, within A4249_RS05075at 1047.800 kb on + strand, within A4249_RS05075at 1048.014 kb on + strandat 1048.015 kb on - strandat 1048.015 kb on - strandat 1048.041 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C)
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1,046,554 + -2.5
1,046,554 + -0.5
1,046,554 + -0.3
1,046,555 - -0.3
1,046,555 - +0.0
1,047,488 - -1.1
1,047,546 + A4249_RS05075 0.11 -0.9
1,047,547 - A4249_RS05075 0.11 +0.1
1,047,547 - A4249_RS05075 0.11 +0.2
1,047,547 - A4249_RS05075 0.11 +0.6
1,047,649 + A4249_RS05075 0.30 +0.1
1,047,649 + A4249_RS05075 0.30 +0.7
1,047,649 + A4249_RS05075 0.30 -1.0
1,047,649 + A4249_RS05075 0.30 +0.7
1,047,649 + A4249_RS05075 0.30 +1.7
1,047,649 + A4249_RS05075 0.30 +1.0
1,047,649 + A4249_RS05075 0.30 -0.7
1,047,649 + A4249_RS05075 0.30 -0.3
1,047,649 + A4249_RS05075 0.30 -0.5
1,047,649 + A4249_RS05075 0.30 +0.6
1,047,650 - A4249_RS05075 0.30 +0.1
1,047,650 - A4249_RS05075 0.30 +0.5
1,047,650 - A4249_RS05075 0.30 +0.2
1,047,800 + A4249_RS05075 0.58 +0.2
1,048,014 + +0.8
1,048,015 - -0.0
1,048,015 - -0.2
1,048,041 - -1.4

Or see this region's nucleotide sequence