Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03480 and A4249_RS03485 are separated by 408 nucleotides A4249_RS03485 and A4249_RS03490 are separated by 454 nucleotides
A4249_RS03480: A4249_RS03480 - SRPBCC family protein, at 725,406 to 725,975
_RS03480
A4249_RS03485: A4249_RS03485 - SDR family NAD(P)-dependent oxidoreductase, at 726,384 to 726,899
_RS03485
A4249_RS03490: A4249_RS03490 - LysR family transcriptional regulator, at 727,354 to 728,232
_RS03490
Position (kb) 726
727 Strain fitness (log2 ratio) -2
-1
0
1
2 at 725.388 kb on + strand at 725.389 kb on - strand at 725.389 kb on - strand at 725.389 kb on - strand at 725.575 kb on + strand, within A4249_RS03480 at 725.575 kb on + strand, within A4249_RS03480 at 725.575 kb on + strand, within A4249_RS03480 at 725.575 kb on + strand, within A4249_RS03480 at 725.575 kb on + strand, within A4249_RS03480 at 725.576 kb on - strand, within A4249_RS03480 at 725.576 kb on - strand, within A4249_RS03480 at 725.666 kb on + strand, within A4249_RS03480 at 725.666 kb on + strand, within A4249_RS03480 at 725.666 kb on + strand, within A4249_RS03480 at 725.666 kb on + strand, within A4249_RS03480 at 725.667 kb on - strand, within A4249_RS03480 at 725.667 kb on - strand, within A4249_RS03480 at 725.667 kb on - strand, within A4249_RS03480 at 725.667 kb on - strand, within A4249_RS03480 at 725.667 kb on - strand, within A4249_RS03480 at 725.667 kb on - strand, within A4249_RS03480 at 725.724 kb on + strand, within A4249_RS03480 at 725.816 kb on + strand, within A4249_RS03480 at 725.816 kb on + strand, within A4249_RS03480 at 725.816 kb on + strand, within A4249_RS03480 at 725.816 kb on + strand, within A4249_RS03480 at 725.817 kb on - strand, within A4249_RS03480 at 725.842 kb on + strand, within A4249_RS03480 at 725.842 kb on + strand, within A4249_RS03480 at 725.842 kb on + strand, within A4249_RS03480 at 725.843 kb on - strand, within A4249_RS03480 at 725.843 kb on - strand, within A4249_RS03480 at 725.896 kb on + strand, within A4249_RS03480 at 725.896 kb on + strand, within A4249_RS03480 at 725.896 kb on + strand, within A4249_RS03480 at 725.897 kb on - strand, within A4249_RS03480 at 725.975 kb on + strand at 725.975 kb on + strand at 725.976 kb on - strand at 725.976 kb on - strand at 725.981 kb on + strand at 725.981 kb on + strand at 725.981 kb on + strand at 725.981 kb on + strand at 725.981 kb on + strand at 725.982 kb on - strand at 725.982 kb on - strand at 726.079 kb on + strand at 726.079 kb on + strand at 726.079 kb on + strand at 726.080 kb on - strand at 726.080 kb on - strand at 726.321 kb on + strand at 726.321 kb on + strand at 726.321 kb on + strand at 726.321 kb on + strand at 726.321 kb on + strand at 726.321 kb on + strand at 726.322 kb on - strand at 726.322 kb on - strand at 726.443 kb on + strand, within A4249_RS03485 at 726.443 kb on + strand, within A4249_RS03485 at 726.444 kb on - strand, within A4249_RS03485 at 726.444 kb on - strand, within A4249_RS03485 at 726.444 kb on - strand, within A4249_RS03485 at 726.444 kb on - strand, within A4249_RS03485 at 726.485 kb on + strand, within A4249_RS03485 at 726.485 kb on + strand, within A4249_RS03485 at 726.485 kb on + strand, within A4249_RS03485 at 726.486 kb on - strand, within A4249_RS03485 at 726.486 kb on - strand, within A4249_RS03485 at 726.486 kb on - strand, within A4249_RS03485 at 726.486 kb on - strand, within A4249_RS03485 at 726.564 kb on + strand, within A4249_RS03485 at 726.564 kb on + strand, within A4249_RS03485 at 726.564 kb on + strand, within A4249_RS03485 at 726.564 kb on + strand, within A4249_RS03485 at 726.564 kb on + strand, within A4249_RS03485 at 726.565 kb on - strand, within A4249_RS03485 at 726.565 kb on - strand, within A4249_RS03485 at 726.759 kb on + strand, within A4249_RS03485 at 726.759 kb on + strand, within A4249_RS03485 at 726.760 kb on - strand, within A4249_RS03485 at 726.897 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.989 kb on + strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 726.990 kb on - strand at 727.020 kb on + strand at 727.021 kb on - strand at 727.074 kb on + strand at 727.074 kb on + strand at 727.074 kb on + strand at 727.074 kb on + strand at 727.075 kb on - strand at 727.075 kb on - strand at 727.075 kb on - strand at 727.075 kb on - strand at 727.075 kb on - strand at 727.075 kb on - strand at 727.131 kb on + strand at 727.131 kb on + strand at 727.132 kb on - strand at 727.132 kb on - strand at 727.217 kb on + strand at 727.217 kb on + strand at 727.217 kb on + strand at 727.217 kb on + strand at 727.218 kb on - strand at 727.261 kb on - strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.355 kb on + strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.356 kb on - strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.436 kb on + strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.437 kb on - strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.439 kb on + strand at 727.440 kb on - strand at 727.440 kb on - strand at 727.440 kb on - strand at 727.472 kb on - strand, within A4249_RS03490 at 727.515 kb on - strand, within A4249_RS03490 at 727.565 kb on - strand, within A4249_RS03490 at 727.658 kb on + strand, within A4249_RS03490 at 727.659 kb on - strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.841 kb on + strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490 at 727.842 kb on - strand, within A4249_RS03490
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 725,388 + +0.3 725,389 - -0.8 725,389 - +1.0 725,389 - +0.5 725,575 + A4249_RS03480 0.30 -1.1 725,575 + A4249_RS03480 0.30 +0.7 725,575 + A4249_RS03480 0.30 -1.8 725,575 + A4249_RS03480 0.30 +0.7 725,575 + A4249_RS03480 0.30 -1.0 725,576 - A4249_RS03480 0.30 -0.4 725,576 - A4249_RS03480 0.30 -0.0 725,666 + A4249_RS03480 0.46 -0.1 725,666 + A4249_RS03480 0.46 +1.0 725,666 + A4249_RS03480 0.46 +1.1 725,666 + A4249_RS03480 0.46 -0.3 725,667 - A4249_RS03480 0.46 +1.4 725,667 - A4249_RS03480 0.46 +0.3 725,667 - A4249_RS03480 0.46 +0.2 725,667 - A4249_RS03480 0.46 +0.4 725,667 - A4249_RS03480 0.46 +0.0 725,667 - A4249_RS03480 0.46 +0.2 725,724 + A4249_RS03480 0.56 +1.3 725,816 + A4249_RS03480 0.72 -0.5 725,816 + A4249_RS03480 0.72 -0.7 725,816 + A4249_RS03480 0.72 +0.3 725,816 + A4249_RS03480 0.72 -0.6 725,817 - A4249_RS03480 0.72 -0.0 725,842 + A4249_RS03480 0.76 -0.2 725,842 + A4249_RS03480 0.76 -0.5 725,842 + A4249_RS03480 0.76 -0.7 725,843 - A4249_RS03480 0.77 -0.3 725,843 - A4249_RS03480 0.77 -0.2 725,896 + A4249_RS03480 0.86 -0.3 725,896 + A4249_RS03480 0.86 +0.6 725,896 + A4249_RS03480 0.86 +0.9 725,897 - A4249_RS03480 0.86 -1.1 725,975 + -0.5 725,975 + +0.2 725,976 - -2.1 725,976 - -1.0 725,981 + +0.3 725,981 + -0.4 725,981 + +0.1 725,981 + -0.3 725,981 + +1.3 725,982 - -1.2 725,982 - -0.5 726,079 + +0.7 726,079 + +0.7 726,079 + -0.9 726,080 - +0.9 726,080 - +0.0 726,321 + +0.0 726,321 + +0.2 726,321 + +0.1 726,321 + +0.0 726,321 + +0.4 726,321 + -0.5 726,322 - -2.2 726,322 - +1.2 726,443 + A4249_RS03485 0.11 -0.9 726,443 + A4249_RS03485 0.11 -0.4 726,444 - A4249_RS03485 0.12 -0.4 726,444 - A4249_RS03485 0.12 +0.4 726,444 - A4249_RS03485 0.12 -0.5 726,444 - A4249_RS03485 0.12 -1.0 726,485 + A4249_RS03485 0.20 +0.5 726,485 + A4249_RS03485 0.20 +0.7 726,485 + A4249_RS03485 0.20 +1.6 726,486 - A4249_RS03485 0.20 -0.1 726,486 - A4249_RS03485 0.20 +0.7 726,486 - A4249_RS03485 0.20 -1.1 726,486 - A4249_RS03485 0.20 +1.0 726,564 + A4249_RS03485 0.35 -0.6 726,564 + A4249_RS03485 0.35 -0.9 726,564 + A4249_RS03485 0.35 -2.4 726,564 + A4249_RS03485 0.35 +1.5 726,564 + A4249_RS03485 0.35 +0.3 726,565 - A4249_RS03485 0.35 +2.4 726,565 - A4249_RS03485 0.35 -0.7 726,759 + A4249_RS03485 0.73 +0.1 726,759 + A4249_RS03485 0.73 -0.1 726,760 - A4249_RS03485 0.73 -0.5 726,897 + +0.2 726,989 + +0.3 726,989 + +1.1 726,989 + +0.3 726,989 + +1.3 726,989 + +0.0 726,989 + -0.9 726,989 + -0.1 726,989 + +2.0 726,989 + +0.0 726,989 + -1.1 726,989 + -0.0 726,990 - -0.4 726,990 - -0.1 726,990 - +0.0 726,990 - +0.2 726,990 - +0.7 726,990 - +0.6 726,990 - -1.2 726,990 - -0.3 726,990 - -0.7 726,990 - +0.1 726,990 - +0.5 726,990 - +0.1 727,020 + +0.0 727,021 - +0.2 727,074 + -0.2 727,074 + +0.1 727,074 + -0.3 727,074 + -0.3 727,075 - +0.4 727,075 - +0.3 727,075 - +0.5 727,075 - -0.1 727,075 - +0.8 727,075 - +0.9 727,131 + -0.7 727,131 + -0.2 727,132 - +0.3 727,132 - +0.1 727,217 + +0.2 727,217 + -0.4 727,217 + -0.7 727,217 + -0.8 727,218 - -0.3 727,261 - -0.6 727,355 + -0.6 727,355 + -1.4 727,355 + -0.7 727,355 + -0.6 727,355 + -0.8 727,355 + +0.6 727,355 + +0.8 727,355 + -0.1 727,355 + -1.0 727,355 + -0.3 727,355 + +0.8 727,355 + -1.1 727,356 - -0.8 727,356 - +0.7 727,356 - +0.9 727,356 - +0.9 727,356 - -0.3 727,356 - +0.8 727,356 - -1.0 727,356 - +0.2 727,356 - -0.2 727,356 - -1.0 727,356 - +1.9 727,356 - -1.4 727,356 - -0.0 727,356 - -1.0 727,436 + +0.1 727,436 + -0.0 727,436 + -0.6 727,436 + +1.2 727,436 + +0.3 727,437 - -0.7 727,437 - +0.2 727,437 - -0.8 727,437 - +0.1 727,437 - -0.1 727,437 - -1.3 727,437 - -0.9 727,439 + +0.3 727,439 + +0.7 727,439 + +0.3 727,439 + +0.1 727,439 + +1.0 727,439 + -0.1 727,439 + +0.2 727,439 + +0.5 727,439 + -0.0 727,439 + -0.0 727,439 + -1.2 727,439 + -0.5 727,440 - -0.5 727,440 - -0.4 727,440 - +1.0 727,472 - A4249_RS03490 0.13 +0.0 727,515 - A4249_RS03490 0.18 +1.4 727,565 - A4249_RS03490 0.24 +0.3 727,658 + A4249_RS03490 0.35 -0.5 727,659 - A4249_RS03490 0.35 +1.7 727,841 + A4249_RS03490 0.55 -0.3 727,841 + A4249_RS03490 0.55 -1.3 727,841 + A4249_RS03490 0.55 -0.1 727,841 + A4249_RS03490 0.55 -0.1 727,841 + A4249_RS03490 0.55 -1.3 727,842 - A4249_RS03490 0.56 -1.1 727,842 - A4249_RS03490 0.56 -2.1 727,842 - A4249_RS03490 0.56 +0.9 727,842 - A4249_RS03490 0.56 -0.7 727,842 - A4249_RS03490 0.56 +0.0 727,842 - A4249_RS03490 0.56 +0.6
Or see this region's nucleotide sequence