Experiment: Hypoxanthine 0.7347 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00585 and A4249_RS00590 overlap by 17 nucleotides A4249_RS00590 and A4249_RS00595 overlap by 4 nucleotides A4249_RS00595 and A4249_RS00600 are separated by 48 nucleotides A4249_RS00600 and A4249_RS00605 are separated by 109 nucleotides
A4249_RS00585: A4249_RS00585 - Ada metal-binding domain-containing protein, at 103,459 to 104,538
_RS00585
A4249_RS00590: A4249_RS00590 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 104,522 to 105,049
_RS00590
A4249_RS00595: A4249_RS00595 - tetratricopeptide repeat protein, at 105,046 to 105,891
_RS00595
A4249_RS00600: A4249_RS00600 - LamG domain-containing protein, at 105,940 to 106,650
_RS00600
A4249_RS00605: A4249_RS00605 - host attachment protein, at 106,760 to 107,158
_RS00605
Position (kb) 105
106 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 104.065 kb on + strand, within A4249_RS00585 at 104.066 kb on - strand, within A4249_RS00585 at 104.066 kb on - strand, within A4249_RS00585 at 104.341 kb on + strand, within A4249_RS00585 at 104.342 kb on - strand, within A4249_RS00585 at 104.342 kb on - strand, within A4249_RS00585 at 104.359 kb on - strand, within A4249_RS00585 at 104.494 kb on + strand at 104.494 kb on + strand at 104.494 kb on + strand at 104.494 kb on + strand at 104.494 kb on + strand at 104.494 kb on + strand at 104.494 kb on + strand at 104.494 kb on + strand at 104.495 kb on - strand at 104.495 kb on - strand at 104.495 kb on - strand at 104.636 kb on + strand, within A4249_RS00590 at 104.636 kb on + strand, within A4249_RS00590 at 104.636 kb on + strand, within A4249_RS00590 at 104.637 kb on - strand, within A4249_RS00590 at 104.637 kb on - strand, within A4249_RS00590 at 104.637 kb on - strand, within A4249_RS00590 at 104.637 kb on - strand, within A4249_RS00590 at 104.672 kb on + strand, within A4249_RS00590 at 104.672 kb on + strand, within A4249_RS00590 at 104.672 kb on + strand, within A4249_RS00590 at 104.673 kb on - strand, within A4249_RS00590 at 104.673 kb on - strand, within A4249_RS00590 at 104.673 kb on - strand, within A4249_RS00590 at 104.673 kb on - strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.852 kb on + strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.853 kb on - strand, within A4249_RS00590 at 104.955 kb on + strand, within A4249_RS00590 at 104.956 kb on - strand, within A4249_RS00590 at 104.956 kb on - strand, within A4249_RS00590 at 104.956 kb on - strand, within A4249_RS00590 at 104.984 kb on + strand, within A4249_RS00590 at 105.048 kb on - strand at 105.102 kb on + strand at 105.103 kb on - strand at 105.132 kb on + strand, within A4249_RS00595 at 105.132 kb on + strand, within A4249_RS00595 at 105.132 kb on + strand, within A4249_RS00595 at 105.132 kb on + strand, within A4249_RS00595 at 105.132 kb on + strand, within A4249_RS00595 at 105.133 kb on - strand, within A4249_RS00595 at 105.133 kb on - strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.134 kb on + strand, within A4249_RS00595 at 105.135 kb on - strand, within A4249_RS00595 at 105.135 kb on - strand, within A4249_RS00595 at 105.135 kb on - strand, within A4249_RS00595 at 105.135 kb on - strand, within A4249_RS00595 at 105.191 kb on + strand, within A4249_RS00595 at 105.191 kb on + strand, within A4249_RS00595 at 105.191 kb on + strand, within A4249_RS00595 at 105.191 kb on + strand, within A4249_RS00595 at 105.191 kb on + strand, within A4249_RS00595 at 105.282 kb on + strand, within A4249_RS00595 at 105.282 kb on + strand, within A4249_RS00595 at 105.282 kb on + strand, within A4249_RS00595 at 105.282 kb on + strand, within A4249_RS00595 at 105.282 kb on + strand, within A4249_RS00595 at 105.282 kb on + strand, within A4249_RS00595 at 105.282 kb on + strand, within A4249_RS00595 at 105.283 kb on - strand, within A4249_RS00595 at 105.283 kb on - strand, within A4249_RS00595 at 105.283 kb on - strand, within A4249_RS00595 at 105.283 kb on - strand, within A4249_RS00595 at 105.283 kb on - strand, within A4249_RS00595 at 105.373 kb on + strand, within A4249_RS00595 at 105.374 kb on - strand, within A4249_RS00595 at 105.391 kb on + strand, within A4249_RS00595 at 105.392 kb on - strand, within A4249_RS00595 at 105.392 kb on - strand, within A4249_RS00595 at 105.392 kb on - strand, within A4249_RS00595 at 105.392 kb on - strand, within A4249_RS00595 at 105.413 kb on + strand, within A4249_RS00595 at 105.413 kb on + strand, within A4249_RS00595 at 105.413 kb on + strand, within A4249_RS00595 at 105.413 kb on + strand, within A4249_RS00595 at 105.413 kb on + strand, within A4249_RS00595 at 105.413 kb on + strand, within A4249_RS00595 at 105.414 kb on - strand, within A4249_RS00595 at 105.414 kb on - strand, within A4249_RS00595 at 105.414 kb on - strand, within A4249_RS00595 at 105.414 kb on - strand, within A4249_RS00595 at 105.431 kb on + strand, within A4249_RS00595 at 105.482 kb on + strand, within A4249_RS00595 at 105.483 kb on - strand, within A4249_RS00595 at 105.483 kb on - strand, within A4249_RS00595 at 105.483 kb on - strand, within A4249_RS00595 at 105.483 kb on - strand, within A4249_RS00595 at 105.483 kb on - strand, within A4249_RS00595 at 105.626 kb on + strand, within A4249_RS00595 at 105.626 kb on + strand, within A4249_RS00595 at 105.689 kb on + strand, within A4249_RS00595 at 105.689 kb on + strand, within A4249_RS00595 at 105.689 kb on + strand, within A4249_RS00595 at 105.690 kb on - strand, within A4249_RS00595 at 105.769 kb on - strand, within A4249_RS00595 at 105.891 kb on + strand at 105.891 kb on + strand at 105.892 kb on - strand at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.013 kb on + strand, within A4249_RS00600 at 106.014 kb on - strand, within A4249_RS00600 at 106.014 kb on - strand, within A4249_RS00600 at 106.014 kb on - strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.109 kb on + strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.110 kb on - strand, within A4249_RS00600 at 106.202 kb on + strand, within A4249_RS00600 at 106.203 kb on - strand, within A4249_RS00600 at 106.458 kb on + strand, within A4249_RS00600 at 106.496 kb on - strand, within A4249_RS00600 at 106.684 kb on + strand at 106.684 kb on + strand at 106.685 kb on - strand at 106.740 kb on + strand at 106.740 kb on + strand at 106.740 kb on + strand at 106.741 kb on - strand at 106.752 kb on + strand at 106.753 kb on - strand at 106.753 kb on - strand at 106.753 kb on - strand at 106.825 kb on + strand, within A4249_RS00605 at 106.825 kb on + strand, within A4249_RS00605 at 106.825 kb on + strand, within A4249_RS00605 at 106.826 kb on - strand, within A4249_RS00605 at 106.826 kb on - strand, within A4249_RS00605
Per-strain Table
Position Strand Gene LocusTag Fraction Hypoxanthine 0.7347 mM (C) remove 104,065 + A4249_RS00585 0.56 -0.4 104,066 - A4249_RS00585 0.56 +0.2 104,066 - A4249_RS00585 0.56 +0.9 104,341 + A4249_RS00585 0.82 +0.2 104,342 - A4249_RS00585 0.82 +0.3 104,342 - A4249_RS00585 0.82 -0.8 104,359 - A4249_RS00585 0.83 +0.4 104,494 + -0.1 104,494 + +0.3 104,494 + -0.6 104,494 + +0.5 104,494 + +0.7 104,494 + +1.6 104,494 + +1.9 104,494 + +1.4 104,495 - +0.0 104,495 - -0.5 104,495 - +1.0 104,636 + A4249_RS00590 0.22 +0.6 104,636 + A4249_RS00590 0.22 -0.2 104,636 + A4249_RS00590 0.22 -0.4 104,637 - A4249_RS00590 0.22 -0.1 104,637 - A4249_RS00590 0.22 +0.5 104,637 - A4249_RS00590 0.22 -0.3 104,637 - A4249_RS00590 0.22 +0.1 104,672 + A4249_RS00590 0.28 -1.4 104,672 + A4249_RS00590 0.28 -0.8 104,672 + A4249_RS00590 0.28 +0.9 104,673 - A4249_RS00590 0.29 -0.4 104,673 - A4249_RS00590 0.29 +0.2 104,673 - A4249_RS00590 0.29 +0.0 104,673 - A4249_RS00590 0.29 -0.2 104,852 + A4249_RS00590 0.62 -1.4 104,852 + A4249_RS00590 0.62 -0.8 104,852 + A4249_RS00590 0.62 -0.4 104,852 + A4249_RS00590 0.62 -0.2 104,852 + A4249_RS00590 0.62 -0.2 104,852 + A4249_RS00590 0.62 +0.0 104,852 + A4249_RS00590 0.62 +0.8 104,852 + A4249_RS00590 0.62 +0.3 104,852 + A4249_RS00590 0.62 -0.1 104,852 + A4249_RS00590 0.62 +1.1 104,852 + A4249_RS00590 0.62 -0.2 104,852 + A4249_RS00590 0.62 -0.6 104,852 + A4249_RS00590 0.62 -1.3 104,852 + A4249_RS00590 0.62 +0.7 104,852 + A4249_RS00590 0.62 -0.8 104,853 - A4249_RS00590 0.63 +0.5 104,853 - A4249_RS00590 0.63 -0.2 104,853 - A4249_RS00590 0.63 -0.0 104,853 - A4249_RS00590 0.63 +1.4 104,853 - A4249_RS00590 0.63 -0.3 104,853 - A4249_RS00590 0.63 -0.1 104,853 - A4249_RS00590 0.63 -1.3 104,853 - A4249_RS00590 0.63 -0.3 104,853 - A4249_RS00590 0.63 -0.4 104,853 - A4249_RS00590 0.63 -1.1 104,853 - A4249_RS00590 0.63 -0.1 104,853 - A4249_RS00590 0.63 +0.7 104,853 - A4249_RS00590 0.63 -0.1 104,853 - A4249_RS00590 0.63 -0.9 104,853 - A4249_RS00590 0.63 -0.2 104,853 - A4249_RS00590 0.63 +0.0 104,853 - A4249_RS00590 0.63 -0.6 104,955 + A4249_RS00590 0.82 +0.1 104,956 - A4249_RS00590 0.82 +0.6 104,956 - A4249_RS00590 0.82 -0.3 104,956 - A4249_RS00590 0.82 -0.3 104,984 + A4249_RS00590 0.88 +0.3 105,048 - -0.2 105,102 + -0.1 105,103 - -0.2 105,132 + A4249_RS00595 0.10 -0.1 105,132 + A4249_RS00595 0.10 +0.2 105,132 + A4249_RS00595 0.10 -1.3 105,132 + A4249_RS00595 0.10 -0.1 105,132 + A4249_RS00595 0.10 -0.2 105,133 - A4249_RS00595 0.10 +0.5 105,133 - A4249_RS00595 0.10 +0.2 105,134 + A4249_RS00595 0.10 +0.1 105,134 + A4249_RS00595 0.10 +1.3 105,134 + A4249_RS00595 0.10 -0.6 105,134 + A4249_RS00595 0.10 -0.5 105,134 + A4249_RS00595 0.10 +0.0 105,134 + A4249_RS00595 0.10 +0.2 105,134 + A4249_RS00595 0.10 +0.0 105,134 + A4249_RS00595 0.10 -3.0 105,134 + A4249_RS00595 0.10 +0.3 105,134 + A4249_RS00595 0.10 +0.4 105,134 + A4249_RS00595 0.10 -1.3 105,134 + A4249_RS00595 0.10 -0.1 105,135 - A4249_RS00595 0.11 +0.4 105,135 - A4249_RS00595 0.11 +0.6 105,135 - A4249_RS00595 0.11 +0.4 105,135 - A4249_RS00595 0.11 +1.3 105,191 + A4249_RS00595 0.17 +0.1 105,191 + A4249_RS00595 0.17 -0.7 105,191 + A4249_RS00595 0.17 -1.5 105,191 + A4249_RS00595 0.17 -0.4 105,191 + A4249_RS00595 0.17 -0.7 105,282 + A4249_RS00595 0.28 -0.0 105,282 + A4249_RS00595 0.28 +0.5 105,282 + A4249_RS00595 0.28 -0.5 105,282 + A4249_RS00595 0.28 +1.1 105,282 + A4249_RS00595 0.28 -0.3 105,282 + A4249_RS00595 0.28 -1.5 105,282 + A4249_RS00595 0.28 +0.4 105,283 - A4249_RS00595 0.28 +0.2 105,283 - A4249_RS00595 0.28 +0.5 105,283 - A4249_RS00595 0.28 +0.1 105,283 - A4249_RS00595 0.28 -0.3 105,283 - A4249_RS00595 0.28 -0.6 105,373 + A4249_RS00595 0.39 +0.6 105,374 - A4249_RS00595 0.39 -0.0 105,391 + A4249_RS00595 0.41 -0.9 105,392 - A4249_RS00595 0.41 +0.6 105,392 - A4249_RS00595 0.41 +1.1 105,392 - A4249_RS00595 0.41 -0.6 105,392 - A4249_RS00595 0.41 +1.2 105,413 + A4249_RS00595 0.43 +0.9 105,413 + A4249_RS00595 0.43 +0.8 105,413 + A4249_RS00595 0.43 +0.2 105,413 + A4249_RS00595 0.43 -0.5 105,413 + A4249_RS00595 0.43 +0.2 105,413 + A4249_RS00595 0.43 -0.8 105,414 - A4249_RS00595 0.43 +0.8 105,414 - A4249_RS00595 0.43 +1.0 105,414 - A4249_RS00595 0.43 -0.2 105,414 - A4249_RS00595 0.43 +0.5 105,431 + A4249_RS00595 0.46 -0.4 105,482 + A4249_RS00595 0.52 +1.0 105,483 - A4249_RS00595 0.52 -2.2 105,483 - A4249_RS00595 0.52 -0.0 105,483 - A4249_RS00595 0.52 -0.0 105,483 - A4249_RS00595 0.52 +0.0 105,483 - A4249_RS00595 0.52 -0.5 105,626 + A4249_RS00595 0.69 +0.3 105,626 + A4249_RS00595 0.69 +0.4 105,689 + A4249_RS00595 0.76 +0.6 105,689 + A4249_RS00595 0.76 +0.1 105,689 + A4249_RS00595 0.76 +0.3 105,690 - A4249_RS00595 0.76 -0.1 105,769 - A4249_RS00595 0.85 -1.2 105,891 + -0.4 105,891 + -0.7 105,892 - -0.5 106,013 + A4249_RS00600 0.10 -0.1 106,013 + A4249_RS00600 0.10 -0.1 106,013 + A4249_RS00600 0.10 -1.6 106,013 + A4249_RS00600 0.10 -1.5 106,013 + A4249_RS00600 0.10 -0.4 106,013 + A4249_RS00600 0.10 -0.0 106,014 - A4249_RS00600 0.10 -0.1 106,014 - A4249_RS00600 0.10 -0.2 106,014 - A4249_RS00600 0.10 +0.9 106,109 + A4249_RS00600 0.24 +0.8 106,109 + A4249_RS00600 0.24 +0.2 106,109 + A4249_RS00600 0.24 -0.5 106,109 + A4249_RS00600 0.24 +0.3 106,110 - A4249_RS00600 0.24 -0.2 106,110 - A4249_RS00600 0.24 +1.5 106,110 - A4249_RS00600 0.24 -0.1 106,110 - A4249_RS00600 0.24 -0.1 106,110 - A4249_RS00600 0.24 -0.2 106,202 + A4249_RS00600 0.37 -0.4 106,203 - A4249_RS00600 0.37 -0.5 106,458 + A4249_RS00600 0.73 -0.2 106,496 - A4249_RS00600 0.78 +0.9 106,684 + +0.5 106,684 + -0.9 106,685 - +1.3 106,740 + +0.9 106,740 + -0.0 106,740 + -0.1 106,741 - -0.1 106,752 + -0.1 106,753 - -0.2 106,753 - -0.5 106,753 - +0.3 106,825 + A4249_RS00605 0.16 -1.3 106,825 + A4249_RS00605 0.16 +0.3 106,825 + A4249_RS00605 0.16 +0.9 106,826 - A4249_RS00605 0.17 -1.3 106,826 - A4249_RS00605 0.17 +0.5
Or see this region's nucleotide sequence