Strain Fitness in Escherichia coli ECRC102 around NIAGMN_14705

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,926,364	-	glpD	NIAGMN_14695	0.73	-2.9
2,926,447	-	glpD	NIAGMN_14695	0.79	-1.2
2,926,819	+				-0.5
2,926,820	-				-3.7
2,926,871	+				-2.9
2,926,871	+				+0.2
2,926,872	-				+0.6
2,926,875	+				-0.8
2,926,875	+				+1.2
2,926,876	-				-0.8
2,926,876	-				+2.0
2,926,876	-				+0.2
2,926,877	+				+2.3
2,926,877	+				+1.6
2,926,878	-				-0.4
2,926,892	+				+0.6
2,926,892	+				-3.0
2,926,893	-				+1.3
2,926,893	-				-0.2
2,926,893	-				-1.3
2,926,893	-				+0.0
2,926,893	-				-0.7
2,926,942	-				+0.1
2,926,975	+				-0.5
2,926,975	+				+0.3
2,926,975	+				-0.3
2,926,975	+				-0.2
2,926,976	-				-2.8
2,926,978	+				-3.4
2,926,979	-				-0.0
2,926,979	-				+1.6
2,926,979	-				-1.2
2,926,979	-				-1.4
2,927,033	-	glpE	NIAGMN_14700	0.23	-1.9
2,927,116	+	glpE	NIAGMN_14700	0.48	-0.8
2,927,116	+	glpE	NIAGMN_14700	0.48	+0.9
2,927,116	+	glpE	NIAGMN_14700	0.48	+0.0
2,927,116	+	glpE	NIAGMN_14700	0.48	-3.4
2,927,116	+	glpE	NIAGMN_14700	0.48	+0.4
2,927,116	+	glpE	NIAGMN_14700	0.48	-1.6
2,927,116	+	glpE	NIAGMN_14700	0.48	+1.9
2,927,117	-	glpE	NIAGMN_14700	0.49	-2.0
2,927,117	-	glpE	NIAGMN_14700	0.49	-2.7
2,927,154	-	glpE	NIAGMN_14700	0.60	-2.4
2,927,154	-	glpE	NIAGMN_14700	0.60	-1.0
2,927,164	+	glpE	NIAGMN_14700	0.63	-0.4
2,927,164	+	glpE	NIAGMN_14700	0.63	-0.0
2,927,165	-	glpE	NIAGMN_14700	0.63	-1.3
2,927,186	+	glpE	NIAGMN_14700	0.70	-1.1
2,927,187	-	glpE	NIAGMN_14700	0.70	-1.2
2,927,204	+	glpE	NIAGMN_14700	0.75	-1.7
2,927,204	+	glpE	NIAGMN_14700	0.75	+0.8
2,927,216	+	glpE	NIAGMN_14700	0.79	+0.0
2,927,216	+	glpE	NIAGMN_14700	0.79	+0.6
2,927,216	+	glpE	NIAGMN_14700	0.79	+0.6
2,927,217	-	glpE	NIAGMN_14700	0.79	-1.2
2,927,217	-	glpE	NIAGMN_14700	0.79	+0.5
2,927,217	-	glpE	NIAGMN_14700	0.79	-0.9
2,927,217	-	glpE	NIAGMN_14700	0.79	-2.4
2,927,217	-	glpE	NIAGMN_14700	0.79	+1.1
2,927,217	-	glpE	NIAGMN_14700	0.79	-2.3
2,927,217	-	glpE	NIAGMN_14700	0.79	+1.5
2,927,217	-	glpE	NIAGMN_14700	0.79	-2.0
2,927,218	+	glpE	NIAGMN_14700	0.80	-1.3
2,927,218	+	glpE	NIAGMN_14700	0.80	+1.2
2,927,219	-	glpE	NIAGMN_14700	0.80	-0.5
2,927,219	-	glpE	NIAGMN_14700	0.80	-3.6
2,927,219	-	glpE	NIAGMN_14700	0.80	+1.2
2,927,290	+				+0.2
2,927,290	+				-0.7
2,927,291	-				-1.6
2,927,291	-				+0.2
2,927,292	+				+0.3
2,927,292	+				-0.9
2,927,292	+				-0.9
2,927,292	+				+1.1
2,927,292	+				-0.0
2,927,292	+				+0.4
2,927,293	-				+0.3
2,927,340	+				-1.6
2,927,340	+				-0.1
2,927,383	+				-0.6
2,927,383	+				+1.4
2,927,383	+				+1.0
2,927,383	+				-3.4
2,927,383	+				-0.0
2,927,383	+				+0.7
2,927,383	+				-4.2
2,927,383	+				-1.9
2,927,384	-				+2.5
2,927,384	-				+0.4
2,927,404	-				+0.1
2,927,424	+	glpG	NIAGMN_14705	0.11	-1.0
2,927,424	+	glpG	NIAGMN_14705	0.11	-0.2
2,927,424	+	glpG	NIAGMN_14705	0.11	-1.0
2,927,425	-	glpG	NIAGMN_14705	0.12	-0.2
2,927,425	-	glpG	NIAGMN_14705	0.12	+1.3
2,927,652	+	glpG	NIAGMN_14705	0.39	+1.3
2,927,652	+	glpG	NIAGMN_14705	0.39	-0.5
2,927,690	+	glpG	NIAGMN_14705	0.43	-3.2
2,927,740	+	glpG	NIAGMN_14705	0.49	-0.4
2,927,756	+	glpG	NIAGMN_14705	0.51	-0.0
2,927,756	+	glpG	NIAGMN_14705	0.51	-1.1
2,927,778	+	glpG	NIAGMN_14705	0.54	+0.6
2,927,779	-	glpG	NIAGMN_14705	0.54	-1.6
2,927,788	-	glpG	NIAGMN_14705	0.55	-2.9
2,927,806	+	glpG	NIAGMN_14705	0.57	-1.6
2,927,849	+	glpG	NIAGMN_14705	0.63	-2.9
2,927,849	+	glpG	NIAGMN_14705	0.63	+2.4
2,927,850	-	glpG	NIAGMN_14705	0.63	-1.7
2,927,850	-	glpG	NIAGMN_14705	0.63	-2.0
2,927,860	-	glpG	NIAGMN_14705	0.64	-1.3
2,927,887	+	glpG	NIAGMN_14705	0.67	-1.9
2,927,941	+	glpG	NIAGMN_14705	0.74	+0.0
2,927,941	+	glpG	NIAGMN_14705	0.74	-0.1
2,927,942	-	glpG	NIAGMN_14705	0.74	-0.1
2,927,942	-	glpG	NIAGMN_14705	0.74	+1.6
2,927,942	-	glpG	NIAGMN_14705	0.74	-2.7
2,927,942	-	glpG	NIAGMN_14705	0.74	-1.7
2,927,956	+	glpG	NIAGMN_14705	0.75	+0.6
2,927,966	+	glpG	NIAGMN_14705	0.77	-0.1
2,927,967	-	glpG	NIAGMN_14705	0.77	+1.0
2,927,999	-	glpG	NIAGMN_14705	0.81	-0.6
2,928,014	+	glpG	NIAGMN_14705	0.82	+0.5
2,928,015	-	glpG	NIAGMN_14705	0.83	-0.5
2,928,018	+	glpG	NIAGMN_14705	0.83	+0.7
2,928,157	+				+2.4
2,928,203	-				-0.8
2,928,203	-				-0.7
2,928,217	+				-0.6
2,928,230	+				-3.5
2,928,230	+				+0.9
2,928,230	+				-0.7
2,928,230	+				+0.1
2,928,230	+				-2.2
2,928,231	-				-1.4
2,928,231	-				+1.1
2,928,231	-				+0.5
2,928,231	-				-2.5
2,928,231	-				+0.6
2,928,238	+				-0.1
2,928,280	+	glpR	NIAGMN_14710	0.14	-1.8
2,928,554	-	glpR	NIAGMN_14710	0.50	-2.0
2,928,554	-	glpR	NIAGMN_14710	0.50	-1.1
2,928,606	+	glpR	NIAGMN_14710	0.57	+0.1
2,928,607	-	glpR	NIAGMN_14710	0.57	-1.7
2,928,652	+	glpR	NIAGMN_14710	0.63	-0.3
2,928,781	+	glpR	NIAGMN_14710	0.80	+0.4
2,928,781	+	glpR	NIAGMN_14710	0.80	+0.1
2,928,782	-	glpR	NIAGMN_14710	0.80	-2.1
2,928,829	+	glpR	NIAGMN_14710	0.86	-0.3
2,928,849	+	glpR	NIAGMN_14710	0.89	-1.7
2,928,849	+	glpR	NIAGMN_14710	0.89	+1.2
2,928,849	+	glpR	NIAGMN_14710	0.89	+0.8
2,928,849	+	glpR	NIAGMN_14710	0.89	-3.3
2,928,849	+	glpR	NIAGMN_14710	0.89	-1.2
2,928,849	+	glpR	NIAGMN_14710	0.89	-2.9
2,928,849	+	glpR	NIAGMN_14710	0.89	-4.3
2,928,849	+	glpR	NIAGMN_14710	0.89	-1.4
2,928,850	-	glpR	NIAGMN_14710	0.89	-1.5
2,928,850	-	glpR	NIAGMN_14710	0.89	-0.7
2,928,850	-	glpR	NIAGMN_14710	0.89	-0.4
2,928,850	-	glpR	NIAGMN_14710	0.89	+0.3
2,928,850	-	glpR	NIAGMN_14710	0.89	+0.4
2,928,850	-	glpR	NIAGMN_14710	0.89	-1.3
2,928,850	-	glpR	NIAGMN_14710	0.89	+0.2
2,928,882	+				+0.0
2,928,882	+				-2.5
2,928,913	+				+0.2
2,928,914	-				-2.2
2,928,974	+				-2.8
2,928,975	-				+0.2
2,929,101	+	rtcR	NIAGMN_14715	0.12	+0.5