Strain Fitness in Escherichia coli ECRC102 around NIAGMN_14235

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,835,717	+	yhiJ	NIAGMN_14230	0.65	+1.0
2,835,825	+	yhiJ	NIAGMN_14230	0.71	+2.8
2,835,828	-	yhiJ	NIAGMN_14230	0.72	+2.8
2,835,894	+	yhiJ	NIAGMN_14230	0.76	+0.2
2,835,912	+	yhiJ	NIAGMN_14230	0.77	-2.2
2,835,913	-	yhiJ	NIAGMN_14230	0.77	+0.4
2,835,916	-	yhiJ	NIAGMN_14230	0.77	-2.4
2,835,916	-	yhiJ	NIAGMN_14230	0.77	-1.0
2,835,917	+	yhiJ	NIAGMN_14230	0.77	-0.5
2,835,997	+	yhiJ	NIAGMN_14230	0.82	+0.4
2,835,998	-	yhiJ	NIAGMN_14230	0.82	+0.8
2,836,019	+	yhiJ	NIAGMN_14230	0.83	+2.4
2,836,019	+	yhiJ	NIAGMN_14230	0.83	+0.8
2,836,019	+	yhiJ	NIAGMN_14230	0.83	+1.4
2,836,020	-	yhiJ	NIAGMN_14230	0.83	+0.5
2,836,022	+	yhiJ	NIAGMN_14230	0.84	+0.1
2,836,023	-	yhiJ	NIAGMN_14230	0.84	+0.2
2,836,040	+	yhiJ	NIAGMN_14230	0.85	-3.4
2,836,041	-	yhiJ	NIAGMN_14230	0.85	+3.1
2,836,041	-	yhiJ	NIAGMN_14230	0.85	+0.5
2,836,065	+	yhiJ	NIAGMN_14230	0.86	+1.3
2,836,065	+	yhiJ	NIAGMN_14230	0.86	-2.7
2,836,091	+	yhiJ	NIAGMN_14230	0.88	+2.9
2,836,092	-	yhiJ	NIAGMN_14230	0.88	+1.1
2,836,113	-	yhiJ	NIAGMN_14230	0.89	+1.7
2,836,134	+				-0.5
2,836,135	-				+1.9
2,836,140	+				+2.5
2,836,141	-				-1.8
2,836,164	+				+0.1
2,836,164	+				+1.8
2,836,164	+				+0.9
2,836,164	+				-0.1
2,836,164	+				-0.7
2,836,165	-				+0.1
2,836,165	-				-0.5
2,836,176	+				+1.2
2,836,183	-				-0.3
2,836,199	+				-2.0
2,836,199	+				+0.8
2,836,199	+				+1.2
2,836,219	+				-0.4
2,836,248	+				+2.3
2,836,248	+				+0.4
2,836,277	+				-0.7
2,836,277	+				+1.2
2,836,292	+				-1.2
2,836,293	-				-0.2
2,836,308	+				+2.6
2,836,309	-				+0.7
2,836,314	+				+3.1
2,836,317	+				+1.2
2,836,317	+				+0.9
2,836,337	+				-1.4
2,836,338	-				+3.2
2,836,344	+				+1.2
2,836,347	+				+0.1
2,836,426	+				-2.7
2,836,427	-				+0.2
2,836,427	-				-0.3
2,836,428	+				-2.2
2,836,429	-				-1.5
2,836,439	+				+1.7
2,836,439	+				-0.2
2,836,439	+				-0.7
2,836,439	+				-1.1
2,836,440	-				+1.5
2,836,440	-				-0.2
2,836,445	+				+1.4
2,836,446	-				-1.0
2,836,490	+				+4.2
2,836,490	+				+3.0
2,836,490	+				-4.0
2,836,490	+				-0.5
2,836,490	+				-0.5
2,836,490	+				-1.3
2,836,490	+				+1.0
2,836,491	-				-3.6
2,836,491	-				+0.6
2,836,491	-				+0.1
2,836,491	-				+1.1
2,836,491	-				-0.1
2,836,491	-				+2.8
2,836,491	-				-1.4
2,836,491	-				-0.3
2,836,491	-				+2.0
2,836,491	-				+1.2
2,836,507	-				-1.0
2,836,548	+				-2.5
2,836,548	+				-1.0
2,836,548	+				-1.5
2,836,549	-				+2.6
2,836,549	-				+0.9
2,836,549	-				+1.3
2,836,567	-				+1.2
2,836,611	+				+0.2
2,836,612	-				-0.2
2,836,612	-				+0.2
2,836,629	+				+0.2
2,836,630	-				-1.1
2,836,658	+				+0.5
2,836,658	+				+0.6
2,836,658	+				-0.1
2,836,712	+				+0.8
2,836,718	-				+2.7
2,836,889	+	yhiI	NIAGMN_14235	0.22	+0.5
2,836,889	+	yhiI	NIAGMN_14235	0.22	-3.3
2,837,019	-	yhiI	NIAGMN_14235	0.34	+0.5
2,837,060	+	yhiI	NIAGMN_14235	0.38	-1.3
2,837,094	-	yhiI	NIAGMN_14235	0.41	-0.7
2,837,094	-	yhiI	NIAGMN_14235	0.41	+1.5
2,837,183	+	yhiI	NIAGMN_14235	0.50	-1.5
2,837,183	+	yhiI	NIAGMN_14235	0.50	+0.5
2,837,184	-	yhiI	NIAGMN_14235	0.50	+2.4
2,837,194	+	yhiI	NIAGMN_14235	0.51	-2.1
2,837,194	+	yhiI	NIAGMN_14235	0.51	+1.5
2,837,195	-	yhiI	NIAGMN_14235	0.51	+0.5
2,837,195	-	yhiI	NIAGMN_14235	0.51	+0.9
2,837,195	-	yhiI	NIAGMN_14235	0.51	-0.9
2,837,195	-	yhiI	NIAGMN_14235	0.51	+2.0
2,837,277	-	yhiI	NIAGMN_14235	0.58	-0.6
2,837,375	+	yhiI	NIAGMN_14235	0.68	-3.7
2,837,397	+	yhiI	NIAGMN_14235	0.70	-0.5
2,837,397	+	yhiI	NIAGMN_14235	0.70	+0.8
2,837,397	+	yhiI	NIAGMN_14235	0.70	-1.1
2,837,397	+	yhiI	NIAGMN_14235	0.70	+0.9
2,837,397	+	yhiI	NIAGMN_14235	0.70	-0.2
2,837,397	+	yhiI	NIAGMN_14235	0.70	+2.0
2,837,397	+	yhiI	NIAGMN_14235	0.70	-0.5
2,837,397	+	yhiI	NIAGMN_14235	0.70	-1.8
2,837,398	-	yhiI	NIAGMN_14235	0.70	+0.8
2,837,398	-	yhiI	NIAGMN_14235	0.70	+0.4
2,837,398	-	yhiI	NIAGMN_14235	0.70	-0.3
2,837,398	-	yhiI	NIAGMN_14235	0.70	+2.1
2,837,398	-	yhiI	NIAGMN_14235	0.70	+0.6
2,837,398	-	yhiI	NIAGMN_14235	0.70	-0.4
2,837,398	-	yhiI	NIAGMN_14235	0.70	+1.0
2,837,398	-	yhiI	NIAGMN_14235	0.70	-1.0
2,837,398	-	yhiI	NIAGMN_14235	0.70	-0.3
2,837,399	+	yhiI	NIAGMN_14235	0.70	+1.8
2,837,400	-	yhiI	NIAGMN_14235	0.70	-3.2
2,837,400	-	yhiI	NIAGMN_14235	0.70	+0.5
2,837,400	-	yhiI	NIAGMN_14235	0.70	-0.8
2,837,400	-	yhiI	NIAGMN_14235	0.70	-2.1
2,837,400	-	yhiI	NIAGMN_14235	0.70	+0.8
2,837,400	-	yhiI	NIAGMN_14235	0.70	+0.7
2,837,489	+	yhiI	NIAGMN_14235	0.78	+0.3
2,837,489	+	yhiI	NIAGMN_14235	0.78	-2.8
2,837,489	+	yhiI	NIAGMN_14235	0.78	+0.0
2,837,490	-	yhiI	NIAGMN_14235	0.78	-1.1
2,837,490	-	yhiI	NIAGMN_14235	0.78	+1.2
2,837,594	+	yhiI	NIAGMN_14235	0.88	-2.8
2,837,628	+				+1.2
2,837,628	+				+1.0
2,837,628	+				+1.4
2,837,628	+				+0.0
2,837,628	+				+1.5
2,837,781	-				+0.1
2,837,806	+				+0.7
2,837,806	+				-1.9
2,837,807	-				+0.3
2,837,833	+				+0.1
2,837,877	+				+0.5
2,837,878	-				-1.5
2,837,878	-				+0.2
2,837,878	-				+1.9
2,837,878	-				-0.6
2,838,017	+	rbbA	NIAGMN_14240	0.11	+0.2
2,838,035	+	rbbA	NIAGMN_14240	0.12	-3.3
2,838,035	+	rbbA	NIAGMN_14240	0.12	+0.7
2,838,238	+	rbbA	NIAGMN_14240	0.19	+1.3
2,838,239	-	rbbA	NIAGMN_14240	0.19	+2.0
2,838,313	+	rbbA	NIAGMN_14240	0.22	+1.2
2,838,313	+	rbbA	NIAGMN_14240	0.22	-0.9
2,838,313	+	rbbA	NIAGMN_14240	0.22	-0.7
2,838,313	+	rbbA	NIAGMN_14240	0.22	+0.4
2,838,314	-	rbbA	NIAGMN_14240	0.22	-1.5
2,838,338	+	rbbA	NIAGMN_14240	0.23	-2.5
2,838,338	+	rbbA	NIAGMN_14240	0.23	-0.7
2,838,338	+	rbbA	NIAGMN_14240	0.23	-1.8
2,838,339	-	rbbA	NIAGMN_14240	0.23	+2.5
2,838,339	-	rbbA	NIAGMN_14240	0.23	-0.2
2,838,339	-	rbbA	NIAGMN_14240	0.23	-3.3
2,838,340	+	rbbA	NIAGMN_14240	0.23	+1.2
2,838,341	-	rbbA	NIAGMN_14240	0.23	-3.3
2,838,462	+	rbbA	NIAGMN_14240	0.27	+0.6
2,838,518	+	rbbA	NIAGMN_14240	0.29	+2.2
2,838,519	-	rbbA	NIAGMN_14240	0.29	-3.0
2,838,519	-	rbbA	NIAGMN_14240	0.29	-0.1
2,838,519	-	rbbA	NIAGMN_14240	0.29	-2.3
2,838,519	-	rbbA	NIAGMN_14240	0.29	-0.4