Strain Fitness in Escherichia coli ECRC102 around NIAGMN_13800

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,739,558	-	bisC	NIAGMN_13790	0.77	+3.2
2,739,591	+	bisC	NIAGMN_13790	0.78	-1.8
2,739,670	+	bisC	NIAGMN_13790	0.82	-0.4
2,739,670	+	bisC	NIAGMN_13790	0.82	+1.5
2,739,670	+	bisC	NIAGMN_13790	0.82	-0.4
2,739,670	+	bisC	NIAGMN_13790	0.82	+1.6
2,739,670	+	bisC	NIAGMN_13790	0.82	-0.9
2,739,671	-	bisC	NIAGMN_13790	0.82	+1.4
2,739,671	-	bisC	NIAGMN_13790	0.82	+1.3
2,739,676	+	bisC	NIAGMN_13790	0.82	+1.4
2,739,677	-	bisC	NIAGMN_13790	0.82	+2.3
2,739,720	+	bisC	NIAGMN_13790	0.84	-0.4
2,739,721	-	bisC	NIAGMN_13790	0.84	+1.1
2,739,741	+	bisC	NIAGMN_13790	0.85	+0.7
2,739,742	-	bisC	NIAGMN_13790	0.85	-0.3
2,739,742	-	bisC	NIAGMN_13790	0.85	-2.3
2,739,803	-	bisC	NIAGMN_13790	0.87	+0.5
2,739,803	-	bisC	NIAGMN_13790	0.87	-5.5
2,739,878	+				+1.5
2,739,878	+				+1.3
2,739,879	-				+0.8
2,739,941	+				+0.2
2,739,942	-				+0.2
2,739,947	+				-0.0
2,740,019	+				+0.3
2,740,044	+				-0.4
2,740,067	+				+1.2
2,740,096	-				+0.5
2,740,108	+				-2.5
2,740,108	+				+2.1
2,740,109	-				+0.2
2,740,109	-				+0.4
2,740,109	-				-2.8
2,740,109	-				-2.8
2,740,109	-				+1.1
2,740,232	+	yiaC	NIAGMN_13795	0.38	+0.8
2,740,232	+	yiaC	NIAGMN_13795	0.38	+0.6
2,740,232	+	yiaC	NIAGMN_13795	0.38	+1.5
2,740,232	+	yiaC	NIAGMN_13795	0.38	-0.1
2,740,232	+	yiaC	NIAGMN_13795	0.38	-3.1
2,740,233	-	yiaC	NIAGMN_13795	0.38	+1.6
2,740,233	-	yiaC	NIAGMN_13795	0.38	+1.0
2,740,311	+	yiaC	NIAGMN_13795	0.56	+0.9
2,740,376	+	yiaC	NIAGMN_13795	0.70	+1.5
2,740,376	+	yiaC	NIAGMN_13795	0.70	+0.8
2,740,376	+	yiaC	NIAGMN_13795	0.70	-0.4
2,740,376	+	yiaC	NIAGMN_13795	0.70	-0.1
2,740,377	-	yiaC	NIAGMN_13795	0.71	+0.7
2,740,377	-	yiaC	NIAGMN_13795	0.71	+0.4
2,740,377	-	yiaC	NIAGMN_13795	0.71	+0.3
2,740,377	-	yiaC	NIAGMN_13795	0.71	+2.2
2,740,377	-	yiaC	NIAGMN_13795	0.71	-0.3
2,740,412	+	yiaC	NIAGMN_13795	0.78	+0.5
2,740,423	+	yiaC	NIAGMN_13795	0.81	-2.2
2,740,426	-	yiaC	NIAGMN_13795	0.82	-1.7
2,740,447	-	yiaC	NIAGMN_13795	0.86	-1.9
2,740,511	+				-0.1
2,740,512	-				-0.2
2,740,571	+	tag	NIAGMN_13800	0.12	-0.7
2,740,579	+	tag	NIAGMN_13800	0.13	-2.4
2,740,628	+	tag	NIAGMN_13800	0.22	-2.4
2,740,629	-	tag	NIAGMN_13800	0.22	+0.3
2,740,652	+	tag	NIAGMN_13800	0.26	-1.3
2,740,653	-	tag	NIAGMN_13800	0.27	+2.2
2,740,708	-	tag	NIAGMN_13800	0.36	-3.8
2,740,763	-	tag	NIAGMN_13800	0.46	-0.6
2,740,763	-	tag	NIAGMN_13800	0.46	+0.7
2,740,781	+	tag	NIAGMN_13800	0.49	+0.9
2,740,782	-	tag	NIAGMN_13800	0.49	-2.5
2,740,782	-	tag	NIAGMN_13800	0.49	-0.2
2,740,782	-	tag	NIAGMN_13800	0.49	-0.4
2,740,782	-	tag	NIAGMN_13800	0.49	-2.7
2,740,901	-	tag	NIAGMN_13800	0.71	-2.2
2,741,012	+				-0.0
2,741,020	+				+0.4
2,741,020	+				-3.4
2,741,021	-				+0.3
2,741,021	-				-1.9
2,741,027	+				-0.2
2,741,027	+				+1.1
2,741,028	-				+0.9
2,741,028	-				+0.2
2,741,028	-				-2.4
2,741,029	+				-0.4
2,741,029	+				-0.0
2,741,030	-				+0.4
2,741,067	-				+0.5
2,741,067	-				+2.4
2,741,067	-				-0.2
2,741,079	+				+0.4
2,741,079	+				-1.0
2,741,079	+				+2.1
2,741,080	-				-0.4
2,741,080	-				+0.7
2,741,080	-				+0.4
2,741,080	-				-0.0
2,741,080	-				-0.4
2,741,080	-				+2.3
2,741,083	+				-2.6
2,741,093	+				+0.0
2,741,142	+				-0.4
2,741,142	+				+4.1
2,741,142	+				-1.8
2,741,142	+				+2.1
2,741,143	-				-0.7
2,741,143	-				+0.5
2,741,143	-				+0.7
2,741,153	+				-0.2
2,741,153	+				-0.1
2,741,154	-				+1.2
2,741,157	-				-1.3
2,741,157	-				+1.5
2,741,174	+				-2.4
2,741,174	+				+1.2
2,741,174	+				-0.4
2,741,174	+				+0.2
2,741,174	+				-1.7
2,741,174	+				-3.3
2,741,174	+				+0.3
2,741,175	-				-0.7
2,741,175	-				-1.1
2,741,175	-				-2.4
2,741,175	-				+0.6
2,741,185	+				+1.3
2,741,185	+				-0.4
2,741,185	+				+1.8
2,741,186	-				+2.4
2,741,186	-				-1.0
2,741,186	-				+0.5
2,741,188	+				-0.0
2,741,188	+				-2.1
2,741,222	+				-0.3
2,741,232	-				+1.2
2,741,258	+				-1.4
2,741,258	+				+2.6
2,741,258	+				-3.6
2,741,258	+				-2.0
2,741,258	+				+0.1
2,741,259	-				+1.2
2,741,259	-				+0.3
2,741,259	-				-0.7
2,741,259	-				+0.3
2,741,259	-				+1.1
2,741,259	-				-2.5
2,741,259	-				-0.3
2,741,259	-				+2.5
2,741,279	+				-0.6
2,741,326	+	yhjY	NIAGMN_13805	0.15	+1.0
2,741,326	+	yhjY	NIAGMN_13805	0.15	+0.5
2,741,326	+	yhjY	NIAGMN_13805	0.15	-0.9
2,741,326	+	yhjY	NIAGMN_13805	0.15	+1.4
2,741,327	-	yhjY	NIAGMN_13805	0.15	-2.7
2,741,327	-	yhjY	NIAGMN_13805	0.15	-1.0
2,741,328	+	yhjY	NIAGMN_13805	0.15	+1.4
2,741,329	-	yhjY	NIAGMN_13805	0.15	+0.5
2,741,329	-	yhjY	NIAGMN_13805	0.15	-3.4
2,741,365	+	yhjY	NIAGMN_13805	0.20	-1.8
2,741,366	-	yhjY	NIAGMN_13805	0.20	+0.5
2,741,366	-	yhjY	NIAGMN_13805	0.20	-1.6
2,741,376	+	yhjY	NIAGMN_13805	0.22	-0.9
2,741,395	+	yhjY	NIAGMN_13805	0.24	+0.7
2,741,395	+	yhjY	NIAGMN_13805	0.24	-0.4
2,741,396	-	yhjY	NIAGMN_13805	0.25	-0.6
2,741,403	+	yhjY	NIAGMN_13805	0.26	+2.1
2,741,403	+	yhjY	NIAGMN_13805	0.26	-0.9
2,741,404	-	yhjY	NIAGMN_13805	0.26	+0.0
2,741,419	-	yhjY	NIAGMN_13805	0.28	+1.8
2,741,419	-	yhjY	NIAGMN_13805	0.28	-3.2
2,741,493	+	yhjY	NIAGMN_13805	0.38	+1.2
2,741,520	-	yhjY	NIAGMN_13805	0.42	-1.7
2,741,521	+	yhjY	NIAGMN_13805	0.42	+1.1
2,741,532	+	yhjY	NIAGMN_13805	0.44	+2.1
2,741,555	+	yhjY	NIAGMN_13805	0.47	+1.5
2,741,555	+	yhjY	NIAGMN_13805	0.47	+1.9
2,741,556	-	yhjY	NIAGMN_13805	0.47	+0.6
2,741,556	-	yhjY	NIAGMN_13805	0.47	+1.7
2,741,556	-	yhjY	NIAGMN_13805	0.47	+0.5
2,741,556	-	yhjY	NIAGMN_13805	0.47	-0.6
2,741,556	-	yhjY	NIAGMN_13805	0.47	-0.2
2,741,556	-	yhjY	NIAGMN_13805	0.47	-3.1
2,741,556	-	yhjY	NIAGMN_13805	0.47	-2.0
2,741,561	-	yhjY	NIAGMN_13805	0.48	-1.6
2,741,561	-	yhjY	NIAGMN_13805	0.48	-0.9
2,741,584	+	yhjY	NIAGMN_13805	0.52	-0.1
2,741,584	+	yhjY	NIAGMN_13805	0.52	+1.2
2,741,584	+	yhjY	NIAGMN_13805	0.52	+0.0
2,741,584	+	yhjY	NIAGMN_13805	0.52	+0.4
2,741,584	+	yhjY	NIAGMN_13805	0.52	-4.3
2,741,584	+	yhjY	NIAGMN_13805	0.52	+0.3
2,741,584	+	yhjY	NIAGMN_13805	0.52	-2.5
2,741,584	+	yhjY	NIAGMN_13805	0.52	-1.5
2,741,584	+	yhjY	NIAGMN_13805	0.52	+0.2
2,741,585	-	yhjY	NIAGMN_13805	0.52	-1.4
2,741,585	-	yhjY	NIAGMN_13805	0.52	-0.9
2,741,585	-	yhjY	NIAGMN_13805	0.52	+1.7
2,741,585	-	yhjY	NIAGMN_13805	0.52	-1.3
2,741,604	+	yhjY	NIAGMN_13805	0.54	+0.8
2,741,604	+	yhjY	NIAGMN_13805	0.54	+2.2
2,741,605	-	yhjY	NIAGMN_13805	0.55	-2.5
2,741,607	+	yhjY	NIAGMN_13805	0.55	-1.5
2,741,607	+	yhjY	NIAGMN_13805	0.55	-2.5
2,741,607	+	yhjY	NIAGMN_13805	0.55	+0.2
2,741,607	+	yhjY	NIAGMN_13805	0.55	+1.5
2,741,607	+	yhjY	NIAGMN_13805	0.55	-0.9
2,741,608	-	yhjY	NIAGMN_13805	0.55	+2.5
2,741,646	+	yhjY	NIAGMN_13805	0.60	+2.4
2,741,646	+	yhjY	NIAGMN_13805	0.60	-1.3
2,741,647	-	yhjY	NIAGMN_13805	0.61	+1.2
2,741,647	-	yhjY	NIAGMN_13805	0.61	-2.3
2,741,651	+	yhjY	NIAGMN_13805	0.61	-0.9
2,741,651	+	yhjY	NIAGMN_13805	0.61	-1.4
2,741,707	+	yhjY	NIAGMN_13805	0.69	-1.4
2,741,707	+	yhjY	NIAGMN_13805	0.69	-0.3
2,741,707	+	yhjY	NIAGMN_13805	0.69	-0.3
2,741,707	+	yhjY	NIAGMN_13805	0.69	-2.6
2,741,707	+	yhjY	NIAGMN_13805	0.69	+0.3
2,741,708	-	yhjY	NIAGMN_13805	0.69	-1.1
2,741,708	-	yhjY	NIAGMN_13805	0.69	+0.6
2,741,708	-	yhjY	NIAGMN_13805	0.69	-2.3
2,741,708	-	yhjY	NIAGMN_13805	0.69	+0.4
2,741,708	-	yhjY	NIAGMN_13805	0.69	+0.4
2,741,708	-	yhjY	NIAGMN_13805	0.69	-0.4
2,741,708	-	yhjY	NIAGMN_13805	0.69	+1.7
2,741,710	-	yhjY	NIAGMN_13805	0.70	-0.4
2,741,710	-	yhjY	NIAGMN_13805	0.70	+0.2
2,741,710	-	yhjY	NIAGMN_13805	0.70	+0.0
2,741,731	-	yhjY	NIAGMN_13805	0.73	-1.9
2,741,731	-	yhjY	NIAGMN_13805	0.73	+2.2
2,741,815	-	yhjY	NIAGMN_13805	0.85	+0.6
2,741,832	+	yhjY	NIAGMN_13805	0.87	-0.9
2,741,868	+				+0.4
2,741,869	-				+1.0
2,741,874	+				-0.1
2,741,893	+				-3.9
2,741,894	-				+0.1
2,741,894	-				+0.7
2,741,894	-				+0.8
2,741,895	+				-0.7
2,741,895	+				-0.0
2,741,895	+				-2.0
2,741,895	+				-0.9
2,741,895	+				+3.1
2,741,896	-				+1.4
2,741,991	+				-0.3
2,742,007	+				+0.8
2,742,034	+				-0.8
2,742,035	-				+0.8