Strain Fitness in Escherichia coli ECRC102 around NIAGMN_07270

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,398,828	+	ykgK,ecpR	NIAGMN_07260	0.88	-3.0
1,398,828	+	ykgK,ecpR	NIAGMN_07260	0.88	+1.5
1,398,875	+				-0.4
1,398,961	+				-0.4
1,398,961	+				+0.6
1,399,038	+	ecpA	NIAGMN_07265	0.12	+0.8
1,399,038	+	ecpA	NIAGMN_07265	0.12	-0.7
1,399,173	+	ecpA	NIAGMN_07265	0.35	-1.7
1,399,174	-	ecpA	NIAGMN_07265	0.36	+1.7
1,399,234	+	ecpA	NIAGMN_07265	0.46	-0.7
1,399,234	+	ecpA	NIAGMN_07265	0.46	+0.4
1,399,234	+	ecpA	NIAGMN_07265	0.46	-0.1
1,399,261	+	ecpA	NIAGMN_07265	0.50	+1.5
1,399,262	-	ecpA	NIAGMN_07265	0.51	+1.1
1,399,296	-	ecpA	NIAGMN_07265	0.56	+0.6
1,399,296	-	ecpA	NIAGMN_07265	0.56	+0.6
1,399,298	-	ecpA	NIAGMN_07265	0.57	-0.4
1,399,373	-	ecpA	NIAGMN_07265	0.69	+1.7
1,399,408	+	ecpA	NIAGMN_07265	0.75	-1.0
1,399,524	+				-1.6
1,399,525	-				+0.1
1,399,550	+				-2.3
1,399,551	-				-3.8
1,399,551	-				+0.1
1,399,551	-				+1.5
1,399,564	+				-2.6
1,399,565	-				-1.4
1,399,565	-				-1.1
1,399,590	+				-0.6
1,399,609	+				+2.2
1,399,654	-				+3.0
1,399,684	+	ecpB	NIAGMN_07270	0.11	+0.6
1,399,684	+	ecpB	NIAGMN_07270	0.11	-1.9
1,399,684	+	ecpB	NIAGMN_07270	0.11	+2.3
1,399,685	-	ecpB	NIAGMN_07270	0.11	+1.8
1,399,686	+	ecpB	NIAGMN_07270	0.11	-0.3
1,399,687	-	ecpB	NIAGMN_07270	0.12	-1.7
1,399,687	-	ecpB	NIAGMN_07270	0.12	+0.1
1,399,687	-	ecpB	NIAGMN_07270	0.12	+0.7
1,399,687	-	ecpB	NIAGMN_07270	0.12	-0.0
1,399,687	-	ecpB	NIAGMN_07270	0.12	+0.9
1,399,687	-	ecpB	NIAGMN_07270	0.12	-0.3
1,399,687	-	ecpB	NIAGMN_07270	0.12	+0.1
1,399,766	-	ecpB	NIAGMN_07270	0.23	-1.6
1,399,839	+	ecpB	NIAGMN_07270	0.34	-2.1
1,399,840	-	ecpB	NIAGMN_07270	0.34	+1.3
1,399,840	-	ecpB	NIAGMN_07270	0.34	-0.7
1,399,840	-	ecpB	NIAGMN_07270	0.34	+0.3
1,399,898	+	ecpB	NIAGMN_07270	0.43	-4.3
1,399,898	+	ecpB	NIAGMN_07270	0.43	+0.6
1,399,899	-	ecpB	NIAGMN_07270	0.43	-0.3
1,399,899	-	ecpB	NIAGMN_07270	0.43	-0.3
1,399,899	-	ecpB	NIAGMN_07270	0.43	-3.9
1,399,899	-	ecpB	NIAGMN_07270	0.43	+1.3
1,399,899	-	ecpB	NIAGMN_07270	0.43	-1.7
1,399,929	-	ecpB	NIAGMN_07270	0.48	+2.9
1,399,931	+	ecpB	NIAGMN_07270	0.48	-0.2
1,400,093	-	ecpB	NIAGMN_07270	0.72	-0.9
1,400,153	-	ecpB	NIAGMN_07270	0.81	+0.5
1,400,162	-	ecpB	NIAGMN_07270	0.83	-1.4
1,400,172	-	ecpB	NIAGMN_07270	0.84	+3.2
1,400,172	-	ecpB	NIAGMN_07270	0.84	+2.8
1,400,174	+	ecpB	NIAGMN_07270	0.84	-0.3
1,400,174	+	ecpB	NIAGMN_07270	0.84	+1.9
1,400,257	+				-1.6
1,400,276	+				-2.0
1,400,277	-				-0.4
1,400,277	-				+0.2
1,400,277	-				-0.4
1,400,277	-				-0.8
1,400,277	-				+1.9
1,400,280	+				+0.1
1,400,280	+				+0.6
1,400,280	+				-2.0
1,400,280	+				-2.7
1,400,280	+				-3.4
1,400,280	+				-0.2
1,400,281	-				-0.8
1,400,281	-				+0.7
1,400,398	+				+0.3
1,400,398	+				-1.0
1,400,398	+				-1.8
1,400,398	+				-0.6
1,400,398	+				-1.1
1,400,398	+				-1.0
1,400,399	-				+0.4
1,400,478	+				-0.5
1,400,478	+				-0.1
1,400,478	+				+2.0
1,400,479	-				-0.8
1,400,479	-				-2.8
1,400,481	-				+2.6
1,400,481	-				-2.6
1,400,761	+	ecpC	NIAGMN_07275	0.18	+0.4
1,400,761	+	ecpC	NIAGMN_07275	0.18	-1.7
1,400,762	-	ecpC	NIAGMN_07275	0.18	+1.7
1,400,762	-	ecpC	NIAGMN_07275	0.18	-1.0
1,400,764	+	ecpC	NIAGMN_07275	0.18	+2.1
1,400,764	+	ecpC	NIAGMN_07275	0.18	+0.0
1,400,765	-	ecpC	NIAGMN_07275	0.18	+0.1
1,400,801	+	ecpC	NIAGMN_07275	0.20	-1.1
1,400,817	-	ecpC	NIAGMN_07275	0.20	-0.8
1,400,826	+	ecpC	NIAGMN_07275	0.21	-2.7
1,400,826	+	ecpC	NIAGMN_07275	0.21	-0.6
1,400,827	-	ecpC	NIAGMN_07275	0.21	+1.6
1,400,828	+	ecpC	NIAGMN_07275	0.21	-1.1
1,400,841	+	ecpC	NIAGMN_07275	0.21	-0.4
1,400,841	+	ecpC	NIAGMN_07275	0.21	+1.5
1,400,841	+	ecpC	NIAGMN_07275	0.21	+0.7
1,400,841	+	ecpC	NIAGMN_07275	0.21	+0.6
1,400,841	+	ecpC	NIAGMN_07275	0.21	-2.0
1,400,842	-	ecpC	NIAGMN_07275	0.21	+1.0
1,400,946	+	ecpC	NIAGMN_07275	0.25	+0.2
1,400,980	+	ecpC	NIAGMN_07275	0.27	+2.2
1,400,980	+	ecpC	NIAGMN_07275	0.27	-2.6
1,400,980	+	ecpC	NIAGMN_07275	0.27	-2.8
1,400,981	-	ecpC	NIAGMN_07275	0.27	+2.4
1,400,981	-	ecpC	NIAGMN_07275	0.27	-1.4
1,400,982	+	ecpC	NIAGMN_07275	0.27	-2.4
1,400,982	+	ecpC	NIAGMN_07275	0.27	+0.1
1,400,983	-	ecpC	NIAGMN_07275	0.27	-2.3
1,400,984	+	ecpC	NIAGMN_07275	0.27	-0.2
1,400,984	+	ecpC	NIAGMN_07275	0.27	-1.6
1,400,985	-	ecpC	NIAGMN_07275	0.27	+1.7
1,400,994	+	ecpC	NIAGMN_07275	0.27	+0.8
1,401,061	+	ecpC	NIAGMN_07275	0.30	+2.2
1,401,096	+	ecpC	NIAGMN_07275	0.31	-2.4
1,401,096	+	ecpC	NIAGMN_07275	0.31	+1.0
1,401,193	+	ecpC	NIAGMN_07275	0.35	+2.5
1,401,193	+	ecpC	NIAGMN_07275	0.35	-1.7
1,401,193	+	ecpC	NIAGMN_07275	0.35	+2.4
1,401,194	-	ecpC	NIAGMN_07275	0.35	-1.9
1,401,217	+	ecpC	NIAGMN_07275	0.36	+0.4
1,401,221	-	ecpC	NIAGMN_07275	0.36	+2.0
1,401,271	+	ecpC	NIAGMN_07275	0.38	+0.4
1,401,271	+	ecpC	NIAGMN_07275	0.38	+0.9
1,401,271	+	ecpC	NIAGMN_07275	0.38	-3.2
1,401,271	+	ecpC	NIAGMN_07275	0.38	-0.2
1,401,272	-	ecpC	NIAGMN_07275	0.38	-1.6
1,401,272	-	ecpC	NIAGMN_07275	0.38	-0.6
1,401,272	-	ecpC	NIAGMN_07275	0.38	-1.4
1,401,277	-	ecpC	NIAGMN_07275	0.39	+1.1