Strain Fitness in Escherichia coli ECRC101 around MCAODC_23485

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,423,788	-	terE	MCAODC_23475	0.62	-1.1
1,423,788	-	terE	MCAODC_23475	0.62	+0.2
1,423,788	-	terE	MCAODC_23475	0.62	+0.2
1,423,863	-	terE	MCAODC_23475	0.75	-1.0
1,423,974	-				-0.0
1,424,042	-				-0.2
1,424,104	+				+1.2
1,424,105	-				-3.0
1,424,105	-				+0.5
1,424,105	-				-0.2
1,424,464	-	terD	MCAODC_23480	0.67	-2.0
1,424,465	+	terD	MCAODC_23480	0.68	-0.2
1,424,653	-				+0.7
1,424,673	+				-0.2
1,424,694	-				+1.0
1,424,694	-				+0.3
1,424,694	-				-0.1
1,424,694	-				+0.5
1,424,703	-				-0.1
1,424,703	-				+0.3
1,424,780	-				-0.1
1,424,786	+				-2.1
1,424,786	+				+0.7
1,424,787	-				+1.6
1,424,787	-				-0.2
1,424,787	-				+1.7
1,424,787	-				-0.5
1,424,814	-	terC	MCAODC_23485	0.11	-1.3
1,424,909	+	terC	MCAODC_23485	0.20	+0.2
1,424,936	+	terC	MCAODC_23485	0.23	+2.9
1,424,937	-	terC	MCAODC_23485	0.23	+0.3
1,424,937	-	terC	MCAODC_23485	0.23	-1.3
1,424,937	-	terC	MCAODC_23485	0.23	+0.4
1,424,976	+	terC	MCAODC_23485	0.26	+0.7
1,424,976	+	terC	MCAODC_23485	0.26	-3.9
1,424,976	+	terC	MCAODC_23485	0.26	+0.9
1,424,977	-	terC	MCAODC_23485	0.27	-1.2
1,424,978	+	terC	MCAODC_23485	0.27	+0.4
1,425,041	-	terC	MCAODC_23485	0.33	+0.1
1,425,041	-	terC	MCAODC_23485	0.33	+0.7
1,425,175	+	terC	MCAODC_23485	0.46	+0.2
1,425,223	-	terC	MCAODC_23485	0.50	+0.6
1,425,229	-	terC	MCAODC_23485	0.51	+0.3
1,425,234	-	terC	MCAODC_23485	0.51	+0.6
1,425,252	-	terC	MCAODC_23485	0.53	-0.5
1,425,316	-	terC	MCAODC_23485	0.59	+1.1
1,425,319	-	terC	MCAODC_23485	0.59	-0.1
1,425,339	-	terC	MCAODC_23485	0.61	-3.2
1,425,516	-	terC	MCAODC_23485	0.78	+0.3
1,425,560	+	terC	MCAODC_23485	0.83	-1.8
1,425,561	-	terC	MCAODC_23485	0.83	+0.7
1,425,561	-	terC	MCAODC_23485	0.83	+1.5
1,425,667	-				+0.2
1,425,742	-				+0.6
1,425,879	-	terB	MCAODC_23490	0.25	+1.1
1,425,879	-	terB	MCAODC_23490	0.25	+0.5
1,425,879	-	terB	MCAODC_23490	0.25	-0.2
1,425,924	+	terB	MCAODC_23490	0.35	-1.3
1,425,924	+	terB	MCAODC_23490	0.35	-2.9
1,425,924	+	terB	MCAODC_23490	0.35	+1.3
1,425,983	-	terB	MCAODC_23490	0.48	+0.3
1,426,077	-	terB	MCAODC_23490	0.69	-1.3
1,426,109	+	terB	MCAODC_23490	0.76	+0.4
1,426,109	+	terB	MCAODC_23490	0.76	+2.5
1,426,110	-	terB	MCAODC_23490	0.76	-1.5
1,426,110	-	terB	MCAODC_23490	0.76	-2.1
1,426,110	-	terB	MCAODC_23490	0.76	-1.5
1,426,110	-	terB	MCAODC_23490	0.76	-0.4
1,426,199	-				+1.2
1,426,199	-				+1.3
1,426,220	-				-0.7
1,426,220	-				+0.4
1,426,244	-				-1.6
1,426,312	+				+0.4
1,426,313	-				+0.2
1,426,313	-				-0.2
1,426,354	-				-3.3
1,426,447	-	terA	MCAODC_23495	0.18	-1.3
1,426,484	-	terA	MCAODC_23495	0.21	-0.5
1,426,495	+	terA	MCAODC_23495	0.22	+0.8
1,426,539	-	terA	MCAODC_23495	0.26	+0.0
1,426,561	-	terA	MCAODC_23495	0.28	+0.1
1,426,561	-	terA	MCAODC_23495	0.28	-0.3
1,426,561	-	terA	MCAODC_23495	0.28	-1.8
1,426,561	-	terA	MCAODC_23495	0.28	+0.1
1,426,598	-	terA	MCAODC_23495	0.31	+0.5
1,426,598	-	terA	MCAODC_23495	0.31	-0.2
1,426,598	-	terA	MCAODC_23495	0.31	+1.6
1,426,653	-	terA	MCAODC_23495	0.35	+0.5
1,426,653	-	terA	MCAODC_23495	0.35	-2.0
1,426,653	-	terA	MCAODC_23495	0.35	+1.2
1,426,653	-	terA	MCAODC_23495	0.35	+0.1
1,426,653	-	terA	MCAODC_23495	0.35	+0.6
1,426,655	-	terA	MCAODC_23495	0.36	+1.0