Strain Fitness in Escherichia coli ECRC101 around MCAODC_23090

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,357,732	+	grxB	MCAODC_23080	0.70	+0.3
1,357,732	+	grxB	MCAODC_23080	0.70	+0.3
1,357,796	+	grxB	MCAODC_23080	0.79	+1.9
1,357,797	-	grxB	MCAODC_23080	0.80	-0.5
1,357,804	+	grxB	MCAODC_23080	0.81	-0.2
1,357,844	+	grxB	MCAODC_23080	0.87	-0.2
1,357,844	+	grxB	MCAODC_23080	0.87	+0.0
1,357,909	+				+1.1
1,357,997	+				+0.0
1,358,075	+				+0.1
1,358,076	-				-0.2
1,358,134	+	yceB	MCAODC_23085	0.13	-0.2
1,358,134	+	yceB	MCAODC_23085	0.13	+0.8
1,358,134	+	yceB	MCAODC_23085	0.13	+2.3
1,358,135	-	yceB	MCAODC_23085	0.13	-2.0
1,358,157	+	yceB	MCAODC_23085	0.17	-2.6
1,358,178	+	yceB	MCAODC_23085	0.21	+0.1
1,358,196	+	yceB	MCAODC_23085	0.24	-1.3
1,358,196	+	yceB	MCAODC_23085	0.24	-0.2
1,358,226	+	yceB	MCAODC_23085	0.29	+0.1
1,358,429	+	yceB	MCAODC_23085	0.65	-1.1
1,358,473	+	yceB	MCAODC_23085	0.73	+0.9
1,358,489	+	yceB	MCAODC_23085	0.76	+0.5
1,358,489	+	yceB	MCAODC_23085	0.76	-2.5
1,358,620	+				-1.2
1,358,720	-				-1.8
1,358,720	-				-3.1
1,358,726	+				-1.5
1,358,727	-				-3.6
1,358,748	-				-5.3
1,358,853	-	pyrC	MCAODC_23090	0.12	-3.6
1,358,965	+	pyrC	MCAODC_23090	0.23	-3.5
1,358,965	+	pyrC	MCAODC_23090	0.23	-1.8
1,359,200	+	pyrC	MCAODC_23090	0.45	-3.7
1,359,200	+	pyrC	MCAODC_23090	0.45	-1.5
1,359,201	-	pyrC	MCAODC_23090	0.45	-3.9
1,359,286	+	pyrC	MCAODC_23090	0.53	-3.3
1,359,287	-	pyrC	MCAODC_23090	0.53	-3.5
1,359,357	+	pyrC	MCAODC_23090	0.60	-2.2
1,359,357	+	pyrC	MCAODC_23090	0.60	-3.1
1,359,357	+	pyrC	MCAODC_23090	0.60	+0.7
1,359,358	-	pyrC	MCAODC_23090	0.60	-1.9
1,359,388	+	pyrC	MCAODC_23090	0.63	+1.7
1,359,389	-	pyrC	MCAODC_23090	0.63	-2.6
1,359,562	+	pyrC	MCAODC_23090	0.80	-0.6
1,359,637	+	pyrC	MCAODC_23090	0.87	-5.0
1,359,637	+	pyrC	MCAODC_23090	0.87	-6.7
1,359,752	+				-0.1
1,359,753	-				-3.1
1,359,798	+				+0.2
1,359,798	+				+0.7
1,359,798	+				-2.9
1,359,799	-				+0.1
1,359,799	-				+2.7
1,359,799	-				+1.1
1,359,844	+				+0.8
1,359,847	+				+1.5
1,359,938	+	dinI	MCAODC_23095	0.37	-0.1
1,359,966	+	dinI	MCAODC_23095	0.48	+0.2
1,359,967	-	dinI	MCAODC_23095	0.48	-2.0
1,359,972	+	dinI	MCAODC_23095	0.50	-0.4
1,359,973	-	dinI	MCAODC_23095	0.51	+0.7
1,359,991	+	dinI	MCAODC_23095	0.58	-0.3
1,360,094	+				+0.4
1,360,300	+				+0.6
1,360,301	-				+1.7
1,360,309	-				+0.9
1,360,358	+				+1.2
1,360,423	+	bssS	MCAODC_23100	0.16	-1.5
1,360,448	+	bssS	MCAODC_23100	0.25	-0.0
1,360,452	+	bssS	MCAODC_23100	0.27	+0.2
1,360,494	-	bssS	MCAODC_23100	0.44	+1.9
1,360,573	+	bssS	MCAODC_23100	0.75	+0.4
1,360,573	+	bssS	MCAODC_23100	0.75	+0.2
1,360,697	+				-0.6
1,360,697	+				-1.3
1,360,698	-				+1.4
1,360,698	-				+1.7
1,360,698	-				+2.5
1,360,699	+				+1.1
1,360,699	+				-2.9
1,360,699	+				-0.1
1,360,717	+				-0.9
1,360,718	-				+0.6