Strain Fitness in Escherichia coli ECRC101 around MCAODC_23035

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,348,915	-	flgD	MCAODC_23025	0.19	-1.6
1,348,983	+	flgD	MCAODC_23025	0.28	+1.0
1,348,984	-	flgD	MCAODC_23025	0.28	+1.4
1,349,226	+	flgD	MCAODC_23025	0.63	-0.4
1,349,245	-	flgD	MCAODC_23025	0.66	-0.9
1,349,422	-				-1.6
1,349,422	-				-2.0
1,349,422	-				-0.7
1,349,445	+				+0.0
1,349,481	+				-0.2
1,349,482	-				+0.4
1,349,482	-				+0.7
1,349,482	-				+0.3
1,349,482	-				-0.2
1,349,482	-				-0.3
1,349,563	+	flgC	MCAODC_23030	0.17	+1.5
1,349,695	-	flgC	MCAODC_23030	0.50	+0.2
1,349,695	-	flgC	MCAODC_23030	0.50	+0.2
1,349,695	-	flgC	MCAODC_23030	0.50	-0.9
1,349,695	-	flgC	MCAODC_23030	0.50	+0.6
1,349,696	+	flgC	MCAODC_23030	0.50	-2.8
1,349,801	+	flgC	MCAODC_23030	0.76	+0.3
1,349,917	-				-0.6
1,349,957	+	flgB	MCAODC_23035	0.13	-0.5
1,349,972	-	flgB	MCAODC_23035	0.17	-0.5
1,350,024	-	flgB	MCAODC_23035	0.29	-0.5
1,350,053	+	flgB	MCAODC_23035	0.36	+0.3
1,350,317	+				+1.2
1,350,317	+				+2.7
1,350,318	-				-0.3
1,350,355	-				-0.4
1,350,355	-				+0.4
1,350,405	+				-0.6
1,350,406	-				+1.1
1,350,406	-				+0.6
1,350,409	+				-1.3
1,350,410	-				+1.4
1,350,437	+				+1.1
1,350,451	+				-0.7
1,350,489	+				-0.4
1,350,587	+	flgA	MCAODC_23040	0.17	-0.7
1,350,588	-	flgA	MCAODC_23040	0.18	-0.3
1,350,615	+	flgA	MCAODC_23040	0.22	+0.0
1,350,615	+	flgA	MCAODC_23040	0.22	-0.2
1,350,629	+	flgA	MCAODC_23040	0.24	-2.4
1,350,629	+	flgA	MCAODC_23040	0.24	-0.2
1,350,630	-	flgA	MCAODC_23040	0.24	-0.2
1,350,630	-	flgA	MCAODC_23040	0.24	+0.3
1,350,669	+	flgA	MCAODC_23040	0.30	+1.5
1,350,669	+	flgA	MCAODC_23040	0.30	-2.5
1,350,727	+	flgA	MCAODC_23040	0.39	-1.3
1,350,728	-	flgA	MCAODC_23040	0.39	-0.9
1,350,731	+	flgA	MCAODC_23040	0.39	-0.6
1,350,841	-	flgA	MCAODC_23040	0.56	+2.4
1,350,905	+	flgA	MCAODC_23040	0.66	+1.1
1,351,082	+				-0.3
1,351,083	-				+1.5
1,351,120	-				-1.5
1,351,122	-				+0.9
1,351,165	+				-0.3
1,351,165	+				-0.1
1,351,179	+				+0.7
1,351,202	-				-0.7
1,351,212	+				-0.8
1,351,212	+				+0.7
1,351,241	+	flgM	MCAODC_23045	0.12	+0.4