Strain Fitness in Escherichia coli ECRC101 around MCAODC_13900

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,719,022	+	nuoC	MCAODC_13890	0.74	-2.1
2,719,022	+	nuoC	MCAODC_13890	0.74	-3.0
2,719,032	-	nuoC	MCAODC_13890	0.74	+0.3
2,719,083	-	nuoC	MCAODC_13890	0.77	-0.9
2,719,225	+	nuoC	MCAODC_13890	0.85	-3.2
2,719,226	-	nuoC	MCAODC_13890	0.85	-2.7
2,719,328	+				-0.5
2,719,328	+				-2.9
2,719,328	+				-0.1
2,719,328	+				-2.6
2,719,328	+				-1.3
2,719,329	-				-3.1
2,719,329	-				-1.3
2,719,331	+				-1.6
2,719,332	-				+0.3
2,719,332	-				-3.6
2,719,494	-				-1.2
2,719,497	+				-2.7
2,719,498	-				-2.6
2,719,498	-				-1.1
2,719,911	+	nuoE	MCAODC_13895	0.82	-2.5
2,719,912	-	nuoE	MCAODC_13895	0.83	-1.4
2,719,992	+				-3.8
2,719,993	-				-1.1
2,720,013	-				-1.7
2,720,097	+				-0.7
2,720,289	+	nuoF	MCAODC_13900	0.22	-1.3
2,720,289	+	nuoF	MCAODC_13900	0.22	-3.7
2,720,289	+	nuoF	MCAODC_13900	0.22	-2.0
2,720,289	+	nuoF	MCAODC_13900	0.22	+0.1
2,720,290	-	nuoF	MCAODC_13900	0.22	-0.1
2,720,290	-	nuoF	MCAODC_13900	0.22	-3.4
2,720,291	+	nuoF	MCAODC_13900	0.22	-1.1
2,720,339	+	nuoF	MCAODC_13900	0.26	-0.7
2,720,339	+	nuoF	MCAODC_13900	0.26	-3.0
2,720,339	+	nuoF	MCAODC_13900	0.26	-0.9
2,720,339	+	nuoF	MCAODC_13900	0.26	-3.9
2,720,340	-	nuoF	MCAODC_13900	0.26	-4.6
2,720,340	-	nuoF	MCAODC_13900	0.26	-1.1
2,720,379	+	nuoF	MCAODC_13900	0.29	-2.8
2,720,380	-	nuoF	MCAODC_13900	0.29	-1.8
2,720,526	+	nuoF	MCAODC_13900	0.40	-3.0
2,720,663	+	nuoF	MCAODC_13900	0.50	-2.8
2,720,664	-	nuoF	MCAODC_13900	0.50	-1.6
2,720,720	+	nuoF	MCAODC_13900	0.54	-0.8
2,720,720	+	nuoF	MCAODC_13900	0.54	-2.6
2,720,834	+	nuoF	MCAODC_13900	0.63	-3.8
2,720,834	+	nuoF	MCAODC_13900	0.63	-0.9
2,720,933	+	nuoF	MCAODC_13900	0.70	-1.3
2,720,934	-	nuoF	MCAODC_13900	0.70	-0.9
2,720,939	+	nuoF	MCAODC_13900	0.71	-2.6
2,721,056	+	nuoF	MCAODC_13900	0.79	-2.4
2,721,383	+				-3.7
2,721,383	+				-3.9
2,721,384	-				-0.9
2,721,390	+				-1.9
2,721,401	+				-1.8
2,721,401	+				-1.9
2,721,415	+				-1.7
2,721,416	-				-3.1
2,721,478	+				-1.7
2,721,585	+				-1.9
2,721,586	-				-2.0
2,721,698	+	nuoG	MCAODC_13905	0.11	-3.2
2,721,699	-	nuoG	MCAODC_13905	0.12	-1.1
2,721,783	+	nuoG	MCAODC_13905	0.15	-1.3
2,722,003	-	nuoG	MCAODC_13905	0.23	-2.2
2,722,162	+	nuoG	MCAODC_13905	0.28	-2.6
2,722,198	+	nuoG	MCAODC_13905	0.30	-2.1