Strain Fitness in Escherichia coli ECRC101 around MCAODC_13810

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,700,127	-	folX	MCAODC_13800	0.73	-0.2
2,700,127	-	folX	MCAODC_13800	0.73	+0.7
2,700,132	+	folX	MCAODC_13800	0.74	+0.0
2,700,171	+	folX	MCAODC_13800	0.85	-1.2
2,700,177	+	folX	MCAODC_13800	0.87	-0.3
2,700,181	+	folX	MCAODC_13800	0.88	+0.8
2,700,182	-	folX	MCAODC_13800	0.88	-0.2
2,700,197	-				+0.2
2,700,198	+				+0.5
2,700,199	-				-0.8
2,700,204	+				-1.0
2,700,208	-				+1.4
2,700,246	-				+0.1
2,700,249	+				+0.0
2,700,250	-				+0.9
2,700,259	+				+0.1
2,700,259	+				+2.4
2,700,262	+				-1.1
2,700,263	-				+2.2
2,700,283	+				-0.2
2,700,318	+				+0.8
2,700,319	-				+1.7
2,700,383	-	yfcG	MCAODC_13805	0.16	-1.8
2,700,386	+	yfcG	MCAODC_13805	0.16	+1.2
2,700,387	-	yfcG	MCAODC_13805	0.16	-0.2
2,700,396	+	yfcG	MCAODC_13805	0.18	+0.4
2,700,397	-	yfcG	MCAODC_13805	0.18	+0.1
2,700,501	+	yfcG	MCAODC_13805	0.34	-0.7
2,700,501	+	yfcG	MCAODC_13805	0.34	-0.5
2,700,501	+	yfcG	MCAODC_13805	0.34	-0.6
2,700,502	-	yfcG	MCAODC_13805	0.34	-0.3
2,700,509	-	yfcG	MCAODC_13805	0.35	+0.6
2,700,543	-	yfcG	MCAODC_13805	0.40	+0.3
2,700,575	+	yfcG	MCAODC_13805	0.45	+3.1
2,700,576	-	yfcG	MCAODC_13805	0.45	-0.5
2,700,636	+	yfcG	MCAODC_13805	0.55	-0.4
2,700,637	-	yfcG	MCAODC_13805	0.55	-0.0
2,700,637	-	yfcG	MCAODC_13805	0.55	-0.3
2,700,637	-	yfcG	MCAODC_13805	0.55	+0.9
2,700,697	+	yfcG	MCAODC_13805	0.64	+0.2
2,700,698	-	yfcG	MCAODC_13805	0.64	-1.0
2,700,729	+	yfcG	MCAODC_13805	0.69	-1.7
2,700,785	+	yfcG	MCAODC_13805	0.78	+0.7
2,700,838	-	yfcG	MCAODC_13805	0.86	-0.9
2,700,843	+	yfcG	MCAODC_13805	0.87	+0.7
2,700,844	-	yfcG	MCAODC_13805	0.87	-0.5
2,700,946	+				-0.3
2,700,947	-				+1.9
2,700,969	+				-1.4
2,700,970	-				+0.7
2,700,987	-				-0.3
2,700,987	-				-2.3
2,700,994	+				-0.8
2,700,995	-				-0.9
2,701,026	-				-1.6
2,701,027	+				-2.0
2,701,027	+				-0.4
2,701,027	+				+0.7
2,701,028	-				-1.2
2,701,028	-				+0.8
2,701,028	-				+0.5
2,701,049	+				+1.1
2,701,063	+				+0.5
2,701,063	+				-0.2
2,701,064	-				-0.4
2,701,064	-				-0.3
2,701,064	-				-0.8
2,701,116	+				+1.1
2,701,116	+				-1.2
2,701,116	+				-2.5
2,701,117	-				+0.3
2,701,117	-				+0.7
2,701,246	+	yfcF	MCAODC_13810	0.28	+0.5
2,701,250	-	yfcF	MCAODC_13810	0.29	+0.3
2,701,297	-	yfcF	MCAODC_13810	0.36	-0.7
2,701,297	-	yfcF	MCAODC_13810	0.36	-0.7
2,701,334	+	yfcF	MCAODC_13810	0.42	-0.4
2,701,334	+	yfcF	MCAODC_13810	0.42	-0.7
2,701,334	+	yfcF	MCAODC_13810	0.42	+0.1
2,701,334	+	yfcF	MCAODC_13810	0.42	+0.0
2,701,334	+	yfcF	MCAODC_13810	0.42	-2.0
2,701,335	-	yfcF	MCAODC_13810	0.42	+0.8
2,701,335	-	yfcF	MCAODC_13810	0.42	-0.2
2,701,335	-	yfcF	MCAODC_13810	0.42	-0.0
2,701,522	+	yfcF	MCAODC_13810	0.71	+0.5
2,701,522	+	yfcF	MCAODC_13810	0.71	-2.7
2,701,522	+	yfcF	MCAODC_13810	0.71	+1.1
2,701,522	+	yfcF	MCAODC_13810	0.71	+1.0
2,701,523	-	yfcF	MCAODC_13810	0.71	-2.4
2,701,523	-	yfcF	MCAODC_13810	0.71	-1.8
2,701,523	-	yfcF	MCAODC_13810	0.71	+0.2
2,701,582	+	yfcF	MCAODC_13810	0.80	-1.7
2,701,600	+	yfcF	MCAODC_13810	0.83	+1.5
2,701,603	+	yfcF	MCAODC_13810	0.83	-1.7
2,701,603	+	yfcF	MCAODC_13810	0.83	-0.8
2,701,603	+	yfcF	MCAODC_13810	0.83	+0.2
2,701,603	+	yfcF	MCAODC_13810	0.83	-0.4
2,701,604	-	yfcF	MCAODC_13810	0.84	+2.8
2,701,604	-	yfcF	MCAODC_13810	0.84	+1.2
2,701,734	+				-2.0
2,701,734	+				+0.0
2,701,734	+				+3.0
2,701,734	+				+0.6
2,701,734	+				-0.9
2,701,734	+				+1.3
2,701,734	+				+0.5
2,701,735	-				+1.1
2,701,735	-				+0.2
2,701,735	-				+1.2
2,701,735	-				-1.0
2,701,735	-				-0.1
2,701,901	+	yfcE	MCAODC_13815	0.25	+1.4
2,701,941	+	yfcE	MCAODC_13815	0.32	-0.5
2,701,956	+	yfcE	MCAODC_13815	0.35	-2.1
2,701,956	+	yfcE	MCAODC_13815	0.35	+0.5
2,701,956	+	yfcE	MCAODC_13815	0.35	-0.9
2,701,956	+	yfcE	MCAODC_13815	0.35	-0.1
2,701,956	+	yfcE	MCAODC_13815	0.35	+0.3
2,701,956	+	yfcE	MCAODC_13815	0.35	-0.8
2,701,956	+	yfcE	MCAODC_13815	0.35	+0.7
2,701,956	+	yfcE	MCAODC_13815	0.35	+1.3
2,701,957	-	yfcE	MCAODC_13815	0.35	-1.1
2,701,957	-	yfcE	MCAODC_13815	0.35	+0.7
2,701,957	-	yfcE	MCAODC_13815	0.35	+0.4
2,701,957	-	yfcE	MCAODC_13815	0.35	+0.1
2,702,042	+	yfcE	MCAODC_13815	0.50	+0.9
2,702,042	+	yfcE	MCAODC_13815	0.50	+0.0
2,702,042	+	yfcE	MCAODC_13815	0.50	+0.4
2,702,112	-	yfcE	MCAODC_13815	0.63	+1.6
2,702,135	-	yfcE	MCAODC_13815	0.67	-1.8
2,702,142	+	yfcE	MCAODC_13815	0.68	-0.1
2,702,220	+	yfcE	MCAODC_13815	0.82	+1.4
2,702,255	+	yfcE	MCAODC_13815	0.89	+0.7
2,702,255	+	yfcE	MCAODC_13815	0.89	-1.3
2,702,256	-	yfcE	MCAODC_13815	0.89	-0.2
2,702,256	-	yfcE	MCAODC_13815	0.89	-0.9
2,702,265	-				+0.8
2,702,286	+				+0.1
2,702,287	-				-1.1
2,702,397	+				-1.8
2,702,397	+				+0.4
2,702,494	+	yfcD	MCAODC_13820	0.22	-2.2
2,702,495	-	yfcD	MCAODC_13820	0.22	-3.1
2,702,495	-	yfcD	MCAODC_13820	0.22	-1.5
2,702,495	-	yfcD	MCAODC_13820	0.22	-2.9
2,702,495	-	yfcD	MCAODC_13820	0.22	-2.8
2,702,495	-	yfcD	MCAODC_13820	0.22	-0.2
2,702,573	+	yfcD	MCAODC_13820	0.37	-0.7
2,702,573	+	yfcD	MCAODC_13820	0.37	-0.9
2,702,574	-	yfcD	MCAODC_13820	0.37	+1.0
2,702,693	-	yfcD	MCAODC_13820	0.59	-2.4
2,702,693	-	yfcD	MCAODC_13820	0.59	+2.1