Strain Fitness in Escherichia coli ECRC101 around MCAODC_10865

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
2,167,900	+				+0.2
2,167,901	-				-0.8
2,167,962	+	ygcS	MCAODC_10855	0.11	-0.2
2,167,966	+	ygcS	MCAODC_10855	0.13	+0.1
2,167,966	+	ygcS	MCAODC_10855	0.13	+0.6
2,167,967	-	ygcS	MCAODC_10855	0.13	-1.1
2,168,016	+	ygcS	MCAODC_10855	0.37	+0.3
2,168,016	+	ygcS	MCAODC_10855	0.37	+1.5
2,168,017	-	ygcS	MCAODC_10855	0.37	+0.0
2,168,017	-	ygcS	MCAODC_10855	0.37	-0.4
2,168,017	-	ygcS	MCAODC_10855	0.37	+0.2
2,168,055	+	ygcS	MCAODC_10855	0.56	-1.4
2,168,055	+	ygcS	MCAODC_10855	0.56	+0.3
2,168,056	-	ygcS	MCAODC_10855	0.56	-0.8
2,168,056	-	ygcS	MCAODC_10855	0.56	+0.5
2,168,056	-	ygcS	MCAODC_10855	0.56	+0.5
2,168,064	+	ygcS	MCAODC_10855	0.60	+1.2
2,168,112	+	ygcS	MCAODC_10855	0.83	+1.4
2,168,113	-	ygcS	MCAODC_10855	0.84	-1.1
2,168,204	+	ygcR	MCAODC_10860	0.10	-1.4
2,168,204	+	ygcR	MCAODC_10860	0.10	-0.9
2,168,389	+	ygcR	MCAODC_10860	0.34	+0.6
2,168,444	+	ygcR	MCAODC_10860	0.41	+0.5
2,168,444	+	ygcR	MCAODC_10860	0.41	+0.3
2,168,486	+	ygcR	MCAODC_10860	0.46	+0.1
2,168,487	-	ygcR	MCAODC_10860	0.47	+0.5
2,168,487	-	ygcR	MCAODC_10860	0.47	+0.0
2,168,619	-	ygcR	MCAODC_10860	0.63	-0.2
2,168,751	-	ygcR	MCAODC_10860	0.80	+1.1
2,168,867	-				-0.0
2,168,878	-				+1.3
2,168,878	-				-0.3
2,168,878	-				-0.4
2,168,881	+				+0.8
2,168,881	+				+0.2
2,168,881	+				+0.3
2,168,882	-				+0.1
2,168,882	-				-1.4
2,168,981	-	fixB	MCAODC_10865	0.14	+1.8
2,168,981	-	fixB	MCAODC_10865	0.14	+0.1
2,169,000	+	fixB	MCAODC_10865	0.18	-0.2
2,169,000	+	fixB	MCAODC_10865	0.18	+0.0
2,169,001	-	fixB	MCAODC_10865	0.18	+0.4
2,169,001	-	fixB	MCAODC_10865	0.18	-0.9
2,169,001	-	fixB	MCAODC_10865	0.18	+1.2
2,169,135	+	fixB	MCAODC_10865	0.41	+1.0
2,169,135	+	fixB	MCAODC_10865	0.41	+0.6
2,169,135	+	fixB	MCAODC_10865	0.41	-0.4
2,169,135	+	fixB	MCAODC_10865	0.41	-0.9
2,169,136	-	fixB	MCAODC_10865	0.41	-0.2
2,169,136	-	fixB	MCAODC_10865	0.41	+1.0
2,169,136	-	fixB	MCAODC_10865	0.41	-0.2
2,169,136	-	fixB	MCAODC_10865	0.41	-1.0
2,169,136	-	fixB	MCAODC_10865	0.41	+0.7
2,169,324	+	fixB	MCAODC_10865	0.74	+0.8
2,169,324	+	fixB	MCAODC_10865	0.74	+2.2
2,169,325	-	fixB	MCAODC_10865	0.75	+0.0
2,169,325	-	fixB	MCAODC_10865	0.75	-2.2
2,169,393	+	fixB	MCAODC_10865	0.86	+1.6
2,169,394	-	fixB	MCAODC_10865	0.87	+0.2
2,169,467	+				+0.1
2,169,492	-				+0.2
2,169,545	-		MCAODC_10870	0.22	-0.7
2,169,577	+		MCAODC_10870	0.33	-1.2
2,169,577	+		MCAODC_10870	0.33	+0.3
2,169,577	+		MCAODC_10870	0.33	-0.8
2,169,577	+		MCAODC_10870	0.33	+1.5
2,169,577	+		MCAODC_10870	0.33	+0.7
2,169,578	-		MCAODC_10870	0.34	+1.7
2,169,578	-		MCAODC_10870	0.34	+1.5
2,169,578	-		MCAODC_10870	0.34	+1.5
2,169,629	-		MCAODC_10870	0.52	-0.4
2,169,807	-				+0.5
2,170,093	+	ygcP	MCAODC_10875	0.32	-0.4
2,170,093	+	ygcP	MCAODC_10875	0.32	-1.0
2,170,202	+	ygcP	MCAODC_10875	0.51	-1.4
2,170,202	+	ygcP	MCAODC_10875	0.51	+0.8
2,170,203	-	ygcP	MCAODC_10875	0.51	+0.3
2,170,226	-	ygcP	MCAODC_10875	0.55	+0.1
2,170,277	-	ygcP	MCAODC_10875	0.64	-0.0
2,170,277	-	ygcP	MCAODC_10875	0.64	+0.0
2,170,309	+	ygcP	MCAODC_10875	0.70	+0.3
2,170,309	+	ygcP	MCAODC_10875	0.70	+1.6
2,170,310	-	ygcP	MCAODC_10875	0.70	+0.1
2,170,318	-	ygcP	MCAODC_10875	0.71	-0.3
2,170,333	+	ygcP	MCAODC_10875	0.74	-1.4
2,170,374	+	ygcP	MCAODC_10875	0.81	+1.2