Strain Fitness in Escherichia coli ECRC101 around MCAODC_07565

Experiment: Casamino-acids

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Casamino-acids
1,536,432	+				-0.2
1,536,454	+				+0.0
1,536,455	-				+0.4
1,536,494	-				-0.1
1,536,509	-				+0.2
1,536,521	-				+0.2
1,536,521	-				-0.7
1,536,521	-				-0.1
1,536,589	+				-1.2
1,536,589	+				+0.2
1,536,654	+				-1.3
1,536,654	+				+0.2
1,536,654	+				-0.4
1,536,654	+				-1.3
1,536,655	-				+1.1
1,536,655	-				-3.2
1,536,655	-				-0.7
1,536,655	-				-0.9
1,536,658	+				-1.0
1,536,658	+				+1.1
1,536,658	+				+0.5
1,536,658	+				+0.8
1,536,658	+				-1.5
1,536,659	-				-2.1
1,536,659	-				+0.6
1,536,659	-				-0.8
1,536,702	-				+0.1
1,536,702	-				-0.5
1,536,739	+				-1.2
1,536,739	+				+0.7
1,536,740	-				+0.6
1,536,740	-				-1.1
1,536,740	-				-0.5
1,536,744	+				+0.7
1,536,745	-				-0.4
1,536,745	-				-0.9
1,536,745	-				+0.2
1,536,745	-				-0.1
1,536,745	-				+0.8
1,536,770	-	greB	MCAODC_07560	0.12	-0.2
1,536,840	+	greB	MCAODC_07560	0.27	+0.7
1,536,840	+	greB	MCAODC_07560	0.27	+0.7
1,536,840	+	greB	MCAODC_07560	0.27	-1.4
1,536,841	-	greB	MCAODC_07560	0.27	-0.3
1,536,841	-	greB	MCAODC_07560	0.27	+0.3
1,536,841	-	greB	MCAODC_07560	0.27	-0.0
1,536,841	-	greB	MCAODC_07560	0.27	-0.1
1,536,841	-	greB	MCAODC_07560	0.27	+1.2
1,536,878	-	greB	MCAODC_07560	0.35	-0.2
1,536,960	+	greB	MCAODC_07560	0.52	+0.4
1,536,961	-	greB	MCAODC_07560	0.52	+0.9
1,536,991	+	greB	MCAODC_07560	0.58	+0.3
1,536,991	+	greB	MCAODC_07560	0.58	+1.0
1,536,992	-	greB	MCAODC_07560	0.58	+0.5
1,536,999	+	greB	MCAODC_07560	0.60	+0.6
1,536,999	+	greB	MCAODC_07560	0.60	-1.8
1,537,000	-	greB	MCAODC_07560	0.60	+0.5
1,537,036	+	greB	MCAODC_07560	0.68	-1.4
1,537,036	+	greB	MCAODC_07560	0.68	-0.1
1,537,039	+	greB	MCAODC_07560	0.68	+0.2
1,537,039	+	greB	MCAODC_07560	0.68	+0.6
1,537,040	-	greB	MCAODC_07560	0.69	-2.7
1,537,041	+	greB	MCAODC_07560	0.69	+0.2
1,537,041	+	greB	MCAODC_07560	0.69	-0.5
1,537,041	+	greB	MCAODC_07560	0.69	+1.5
1,537,042	-	greB	MCAODC_07560	0.69	+0.4
1,537,042	-	greB	MCAODC_07560	0.69	-0.3
1,537,042	-	greB	MCAODC_07560	0.69	-0.5
1,537,048	-	greB	MCAODC_07560	0.70	+1.1
1,537,131	+	greB	MCAODC_07560	0.88	-0.0
1,537,132	-	greB	MCAODC_07560	0.88	+1.0
1,537,135	+	greB	MCAODC_07560	0.88	+0.6
1,537,135	+	greB	MCAODC_07560	0.88	+0.3
1,537,135	+	greB	MCAODC_07560	0.88	-0.2
1,537,135	+	greB	MCAODC_07560	0.88	-0.7
1,537,135	+	greB	MCAODC_07560	0.88	+0.5
1,537,135	+	greB	MCAODC_07560	0.88	+0.5
1,537,135	+	greB	MCAODC_07560	0.88	+2.1
1,537,135	+	greB	MCAODC_07560	0.88	+0.7
1,537,136	-	greB	MCAODC_07560	0.89	+1.1
1,537,136	-	greB	MCAODC_07560	0.89	-1.4
1,537,159	-				-1.3
1,537,232	+				+1.0
1,537,233	-				-2.3
1,537,234	+				-0.2
1,537,235	-				+0.3
1,537,245	+				-2.4
1,537,246	-				+0.9
1,537,246	-				+0.1
1,537,246	-				+0.8
1,537,284	+				-0.1
1,537,284	+				-1.5
1,537,288	+				-1.6
1,537,289	-				+0.9
1,537,289	-				-0.5
1,537,289	-				+0.2
1,537,289	-				-0.0
1,537,300	+				-0.9
1,537,301	-				-0.5
1,537,343	+				-0.8
1,537,344	-				+0.0
1,537,375	+				-0.0
1,537,376	-				-3.7
1,537,376	-				-0.2
1,537,376	-				+0.2
1,537,383	+				-0.4
1,537,409	+				-0.8
1,537,410	-				-0.1
1,537,430	-				+0.1
1,537,483	+				-1.1
1,537,484	-				-1.5
1,537,570	-	ompR_G63V	MCAODC_07565	0.21	-0.9
1,537,570	-	ompR_G63V	MCAODC_07565	0.21	-2.0
1,537,570	-	ompR_G63V	MCAODC_07565	0.21	+0.5
1,537,583	+	ompR_G63V	MCAODC_07565	0.23	-1.7
1,537,583	+	ompR_G63V	MCAODC_07565	0.23	-0.5
1,537,583	+	ompR_G63V	MCAODC_07565	0.23	-3.0
1,537,583	+	ompR_G63V	MCAODC_07565	0.23	+0.0
1,537,589	+	ompR_G63V	MCAODC_07565	0.24	+1.0
1,537,589	+	ompR_G63V	MCAODC_07565	0.24	+0.4
1,537,590	-	ompR_G63V	MCAODC_07565	0.24	-1.7
1,537,590	-	ompR_G63V	MCAODC_07565	0.24	-1.5
1,537,656	+	ompR_G63V	MCAODC_07565	0.33	-0.6
1,537,657	-	ompR_G63V	MCAODC_07565	0.33	+0.0
1,537,657	-	ompR_G63V	MCAODC_07565	0.33	-1.4
1,537,738	-	ompR_G63V	MCAODC_07565	0.45	-0.9
1,537,796	+	ompR_G63V	MCAODC_07565	0.53	-2.2
1,537,826	+	ompR_G63V	MCAODC_07565	0.57	+2.7
1,537,965	+	ompR_G63V	MCAODC_07565	0.76	-1.9
1,538,104	+				-2.5
1,538,104	+				-1.6
1,538,128	-				+0.0
1,538,174	+				-1.1
1,538,174	+				+0.6
1,538,174	+				-0.7
1,538,174	+				-0.6
1,538,175	-				-0.7
1,538,175	-				+0.2
1,538,224	-				+1.2
1,538,224	-				+0.1
1,538,274	-	envZ	MCAODC_07570	0.10	+0.9
1,538,297	+	envZ	MCAODC_07570	0.12	+1.0
1,538,297	+	envZ	MCAODC_07570	0.12	-0.5
1,538,297	+	envZ	MCAODC_07570	0.12	-1.3
1,538,298	-	envZ	MCAODC_07570	0.12	-1.3
1,538,298	-	envZ	MCAODC_07570	0.12	-2.4
1,538,298	-	envZ	MCAODC_07570	0.12	-1.7
1,538,373	+	envZ	MCAODC_07570	0.18	+0.1
1,538,373	+	envZ	MCAODC_07570	0.18	-0.4
1,538,373	+	envZ	MCAODC_07570	0.18	+0.2
1,538,374	-	envZ	MCAODC_07570	0.18	-0.2
1,538,445	+	envZ	MCAODC_07570	0.23	-0.3
1,538,446	-	envZ	MCAODC_07570	0.23	-0.2
1,538,559	-	envZ	MCAODC_07570	0.31	-0.1
1,538,620	-	envZ	MCAODC_07570	0.36	+1.1
1,538,621	+	envZ	MCAODC_07570	0.36	-0.1
1,538,621	+	envZ	MCAODC_07570	0.36	-0.9
1,538,622	-	envZ	MCAODC_07570	0.36	+0.1
1,538,622	-	envZ	MCAODC_07570	0.36	+1.4
1,538,622	-	envZ	MCAODC_07570	0.36	-3.0
1,538,622	-	envZ	MCAODC_07570	0.36	+1.3
1,538,622	-	envZ	MCAODC_07570	0.36	-1.1
1,538,638	+	envZ	MCAODC_07570	0.37	+0.2
1,538,638	+	envZ	MCAODC_07570	0.37	-0.2
1,538,732	+	envZ	MCAODC_07570	0.44	-1.7
1,538,754	+	envZ	MCAODC_07570	0.46	-1.0
1,538,813	+	envZ	MCAODC_07570	0.50	-0.3
1,538,854	+	envZ	MCAODC_07570	0.53	+0.3
1,538,855	-	envZ	MCAODC_07570	0.53	+0.6
1,538,871	-	envZ	MCAODC_07570	0.55	+0.9
1,538,885	+	envZ	MCAODC_07570	0.56	-1.2
1,538,946	-	envZ	MCAODC_07570	0.60	-0.1
1,538,991	+	envZ	MCAODC_07570	0.63	-1.7
1,539,043	+	envZ	MCAODC_07570	0.67	+0.1