Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15755 and A4249_RS15760 are separated by 49 nucleotides A4249_RS15760 and A4249_RS15765 overlap by 4 nucleotides A4249_RS15765 and A4249_RS16410 overlap by 7 nucleotides
A4249_RS15755: A4249_RS15755 - amino acid racemase, at 3,185,888 to 3,186,565
_RS15755
A4249_RS15760: A4249_RS15760 - nucleoside hydrolase, at 3,186,615 to 3,187,568
_RS15760
A4249_RS15765: A4249_RS15765 - ribokinase, at 3,187,565 to 3,188,413
_RS15765
A4249_RS16410: A4249_RS16410 - helix-turn-helix transcriptional regulator, at 3,188,407 to 3,189,315
_RS16410
Position (kb)
3187
3188
3189 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3186.603 kb on + strand at 3186.604 kb on - strand at 3186.604 kb on - strand at 3186.620 kb on + strand at 3186.620 kb on + strand at 3186.620 kb on + strand at 3186.620 kb on + strand at 3186.621 kb on - strand at 3186.621 kb on - strand at 3186.621 kb on - strand at 3186.621 kb on - strand at 3186.621 kb on - strand at 3187.237 kb on + strand, within A4249_RS15760 at 3187.956 kb on + strand, within A4249_RS15765 at 3187.957 kb on - strand, within A4249_RS15765 at 3188.108 kb on + strand, within A4249_RS15765 at 3188.108 kb on + strand, within A4249_RS15765 at 3188.108 kb on + strand, within A4249_RS15765 at 3188.108 kb on + strand, within A4249_RS15765 at 3188.109 kb on - strand, within A4249_RS15765 at 3188.109 kb on - strand, within A4249_RS15765 at 3188.109 kb on - strand, within A4249_RS15765 at 3188.109 kb on - strand, within A4249_RS15765 at 3188.109 kb on - strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.177 kb on + strand, within A4249_RS15765 at 3188.178 kb on - strand, within A4249_RS15765 at 3188.178 kb on - strand, within A4249_RS15765 at 3188.178 kb on - strand, within A4249_RS15765 at 3188.178 kb on - strand, within A4249_RS15765 at 3188.178 kb on - strand, within A4249_RS15765 at 3188.411 kb on + strand at 3188.411 kb on + strand at 3188.411 kb on + strand at 3188.411 kb on + strand at 3188.412 kb on - strand at 3188.600 kb on + strand, within A4249_RS16410 at 3188.600 kb on + strand, within A4249_RS16410 at 3188.601 kb on - strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.752 kb on + strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.753 kb on - strand, within A4249_RS16410 at 3188.777 kb on + strand, within A4249_RS16410 at 3188.777 kb on + strand, within A4249_RS16410 at 3188.777 kb on + strand, within A4249_RS16410 at 3188.778 kb on - strand, within A4249_RS16410 at 3188.778 kb on - strand, within A4249_RS16410 at 3188.829 kb on + strand, within A4249_RS16410 at 3188.829 kb on + strand, within A4249_RS16410 at 3188.830 kb on - strand, within A4249_RS16410 at 3188.862 kb on + strand, within A4249_RS16410 at 3188.862 kb on + strand, within A4249_RS16410 at 3188.862 kb on + strand, within A4249_RS16410 at 3188.862 kb on + strand, within A4249_RS16410 at 3188.862 kb on + strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.863 kb on - strand, within A4249_RS16410 at 3188.878 kb on + strand, within A4249_RS16410 at 3188.962 kb on + strand, within A4249_RS16410 at 3188.963 kb on - strand, within A4249_RS16410 at 3189.064 kb on + strand, within A4249_RS16410 at 3189.064 kb on + strand, within A4249_RS16410 at 3189.064 kb on + strand, within A4249_RS16410 at 3189.065 kb on - strand, within A4249_RS16410 at 3189.065 kb on - strand, within A4249_RS16410 at 3189.065 kb on - strand, within A4249_RS16410 at 3189.183 kb on + strand, within A4249_RS16410 at 3189.183 kb on + strand, within A4249_RS16410 at 3189.183 kb on + strand, within A4249_RS16410 at 3189.183 kb on + strand, within A4249_RS16410 at 3189.183 kb on + strand, within A4249_RS16410 at 3189.183 kb on + strand, within A4249_RS16410 at 3189.184 kb on - strand, within A4249_RS16410 at 3189.184 kb on - strand, within A4249_RS16410 at 3189.184 kb on - strand, within A4249_RS16410 at 3189.184 kb on - strand, within A4249_RS16410 at 3189.184 kb on - strand, within A4249_RS16410 at 3189.184 kb on - strand, within A4249_RS16410 at 3189.184 kb on - strand, within A4249_RS16410 at 3189.286 kb on + strand at 3189.299 kb on + strand at 3189.300 kb on - strand at 3189.328 kb on + strand at 3189.328 kb on + strand at 3189.329 kb on - strand at 3189.329 kb on - strand at 3189.329 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 3,186,603 + -0.8 3,186,604 - -0.6 3,186,604 - +2.0 3,186,620 + -1.0 3,186,620 + -0.1 3,186,620 + +1.0 3,186,620 + -0.4 3,186,621 - -0.5 3,186,621 - -1.5 3,186,621 - +0.1 3,186,621 - +0.1 3,186,621 - -0.1 3,187,237 + A4249_RS15760 0.65 -1.2 3,187,956 + A4249_RS15765 0.46 -1.7 3,187,957 - A4249_RS15765 0.46 -0.1 3,188,108 + A4249_RS15765 0.64 -1.5 3,188,108 + A4249_RS15765 0.64 -1.4 3,188,108 + A4249_RS15765 0.64 -0.0 3,188,108 + A4249_RS15765 0.64 -0.4 3,188,109 - A4249_RS15765 0.64 +0.3 3,188,109 - A4249_RS15765 0.64 -0.2 3,188,109 - A4249_RS15765 0.64 -0.1 3,188,109 - A4249_RS15765 0.64 -0.6 3,188,109 - A4249_RS15765 0.64 -0.7 3,188,177 + A4249_RS15765 0.72 -0.2 3,188,177 + A4249_RS15765 0.72 -0.2 3,188,177 + A4249_RS15765 0.72 -0.4 3,188,177 + A4249_RS15765 0.72 +0.6 3,188,177 + A4249_RS15765 0.72 -0.4 3,188,177 + A4249_RS15765 0.72 +0.2 3,188,177 + A4249_RS15765 0.72 -0.9 3,188,177 + A4249_RS15765 0.72 -0.2 3,188,177 + A4249_RS15765 0.72 -1.7 3,188,178 - A4249_RS15765 0.72 +0.0 3,188,178 - A4249_RS15765 0.72 +0.7 3,188,178 - A4249_RS15765 0.72 -0.1 3,188,178 - A4249_RS15765 0.72 +0.5 3,188,178 - A4249_RS15765 0.72 +0.6 3,188,411 + -0.0 3,188,411 + +0.3 3,188,411 + -0.0 3,188,411 + -0.1 3,188,412 - -0.5 3,188,600 + A4249_RS16410 0.21 -0.3 3,188,600 + A4249_RS16410 0.21 -0.9 3,188,601 - A4249_RS16410 0.21 -0.1 3,188,752 + A4249_RS16410 0.38 -0.5 3,188,752 + A4249_RS16410 0.38 +0.5 3,188,752 + A4249_RS16410 0.38 +1.0 3,188,752 + A4249_RS16410 0.38 +0.2 3,188,752 + A4249_RS16410 0.38 +0.1 3,188,752 + A4249_RS16410 0.38 +1.9 3,188,752 + A4249_RS16410 0.38 +0.6 3,188,752 + A4249_RS16410 0.38 -0.1 3,188,753 - A4249_RS16410 0.38 -1.1 3,188,753 - A4249_RS16410 0.38 +1.2 3,188,753 - A4249_RS16410 0.38 -1.2 3,188,753 - A4249_RS16410 0.38 -0.4 3,188,753 - A4249_RS16410 0.38 -0.6 3,188,753 - A4249_RS16410 0.38 -0.1 3,188,753 - A4249_RS16410 0.38 -0.7 3,188,753 - A4249_RS16410 0.38 -0.1 3,188,753 - A4249_RS16410 0.38 -0.6 3,188,753 - A4249_RS16410 0.38 -0.3 3,188,753 - A4249_RS16410 0.38 +0.9 3,188,753 - A4249_RS16410 0.38 -1.3 3,188,753 - A4249_RS16410 0.38 -1.5 3,188,777 + A4249_RS16410 0.41 +0.0 3,188,777 + A4249_RS16410 0.41 -1.6 3,188,777 + A4249_RS16410 0.41 -0.6 3,188,778 - A4249_RS16410 0.41 -0.2 3,188,778 - A4249_RS16410 0.41 +0.4 3,188,829 + A4249_RS16410 0.46 -0.4 3,188,829 + A4249_RS16410 0.46 +0.0 3,188,830 - A4249_RS16410 0.47 +0.5 3,188,862 + A4249_RS16410 0.50 +1.1 3,188,862 + A4249_RS16410 0.50 +0.2 3,188,862 + A4249_RS16410 0.50 -0.1 3,188,862 + A4249_RS16410 0.50 -0.3 3,188,862 + A4249_RS16410 0.50 -0.2 3,188,863 - A4249_RS16410 0.50 -2.1 3,188,863 - A4249_RS16410 0.50 -0.1 3,188,863 - A4249_RS16410 0.50 +0.5 3,188,863 - A4249_RS16410 0.50 +0.4 3,188,863 - A4249_RS16410 0.50 -0.9 3,188,863 - A4249_RS16410 0.50 -2.3 3,188,863 - A4249_RS16410 0.50 +0.3 3,188,863 - A4249_RS16410 0.50 +0.2 3,188,863 - A4249_RS16410 0.50 +0.2 3,188,878 + A4249_RS16410 0.52 +0.1 3,188,962 + A4249_RS16410 0.61 -1.3 3,188,963 - A4249_RS16410 0.61 -0.0 3,189,064 + A4249_RS16410 0.72 -0.5 3,189,064 + A4249_RS16410 0.72 -1.2 3,189,064 + A4249_RS16410 0.72 +0.8 3,189,065 - A4249_RS16410 0.72 +0.0 3,189,065 - A4249_RS16410 0.72 +0.0 3,189,065 - A4249_RS16410 0.72 -0.1 3,189,183 + A4249_RS16410 0.85 -1.0 3,189,183 + A4249_RS16410 0.85 +0.4 3,189,183 + A4249_RS16410 0.85 +0.8 3,189,183 + A4249_RS16410 0.85 +1.7 3,189,183 + A4249_RS16410 0.85 +0.3 3,189,183 + A4249_RS16410 0.85 +0.3 3,189,184 - A4249_RS16410 0.85 -0.7 3,189,184 - A4249_RS16410 0.85 -0.7 3,189,184 - A4249_RS16410 0.85 +0.6 3,189,184 - A4249_RS16410 0.85 -1.1 3,189,184 - A4249_RS16410 0.85 +0.3 3,189,184 - A4249_RS16410 0.85 -0.3 3,189,184 - A4249_RS16410 0.85 +0.6 3,189,286 + -0.7 3,189,299 + -0.7 3,189,300 - -0.9 3,189,328 + -0.1 3,189,328 + +1.3 3,189,329 - +0.9 3,189,329 - -1.5 3,189,329 - -1.3
Or see this region's nucleotide sequence