Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15445

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15435 and A4249_RS15440 overlap by 4 nucleotidesA4249_RS15440 and A4249_RS15445 overlap by 2 nucleotidesA4249_RS15445 and A4249_RS15450 are separated by 26 nucleotides A4249_RS15435: A4249_RS15435 - uroporphyrinogen-III synthase, at 3,126,494 to 3,127,201 _RS15435 A4249_RS15440: A4249_RS15440 - hydroxymethylbilane synthase, at 3,127,198 to 3,128,163 _RS15440 A4249_RS15445: A4249_RS15445 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 3,128,162 to 3,129,349 _RS15445 A4249_RS15450: A4249_RS15450 - NAD(P)-dependent glycerol-3-phosphate dehydrogenase, at 3,129,376 to 3,130,374 _RS15450 Position (kb) 3128 3129 3130Strain fitness (log2 ratio) -1 0 1at 3128.224 kb on + strandat 3128.224 kb on + strandat 3129.355 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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3,128,224 + +1.0
3,128,224 + +1.6
3,129,355 - +0.7

Or see this region's nucleotide sequence