Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15365

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15360 and A4249_RS15365 are separated by 29 nucleotidesA4249_RS15365 and A4249_RS15370 are separated by 109 nucleotides A4249_RS15360: A4249_RS15360 - DNA replication/repair protein RecF, at 3,112,517 to 3,113,638 _RS15360 A4249_RS15365: A4249_RS15365 - DNA polymerase III subunit beta, at 3,113,668 to 3,114,786 _RS15365 A4249_RS15370: A4249_RS15370 - chromosomal replication initiator protein DnaA, at 3,114,896 to 3,116,350 _RS15370 Position (kb) 3113 3114 3115Strain fitness (log2 ratio) -2 -1 0 1at 3113.301 kb on + strand, within A4249_RS15360at 3113.301 kb on + strand, within A4249_RS15360at 3113.302 kb on - strand, within A4249_RS15360at 3113.601 kb on + strandat 3113.601 kb on + strandat 3113.601 kb on + strandat 3113.601 kb on + strandat 3113.601 kb on + strandat 3113.601 kb on + strandat 3113.601 kb on + strandat 3113.602 kb on - strandat 3113.602 kb on - strandat 3113.602 kb on - strandat 3113.602 kb on - strandat 3113.650 kb on - strandat 3113.669 kb on + strandat 3113.669 kb on + strandat 3113.669 kb on + strandat 3113.669 kb on + strandat 3113.669 kb on + strandat 3113.670 kb on - strandat 3113.670 kb on - strandat 3113.670 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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3,113,301 + A4249_RS15360 0.70 -0.1
3,113,301 + A4249_RS15360 0.70 -0.7
3,113,302 - A4249_RS15360 0.70 +0.0
3,113,601 + -0.6
3,113,601 + +0.1
3,113,601 + -0.3
3,113,601 + +0.1
3,113,601 + +0.4
3,113,601 + -1.9
3,113,601 + +0.8
3,113,602 - -0.2
3,113,602 - +1.5
3,113,602 - -0.8
3,113,602 - -0.0
3,113,650 - -0.1
3,113,669 + +1.1
3,113,669 + +0.6
3,113,669 + -0.4
3,113,669 + -0.0
3,113,669 + +0.4
3,113,670 - +0.3
3,113,670 - -0.1
3,113,670 - +0.6

Or see this region's nucleotide sequence