Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14730

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14720 and A4249_RS14725 are separated by 43 nucleotidesA4249_RS14725 and A4249_RS14730 are separated by 27 nucleotidesA4249_RS14730 and A4249_RS14735 overlap by 4 nucleotidesA4249_RS14735 and A4249_RS14740 are separated by 46 nucleotides A4249_RS14720: A4249_RS14720 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 2,981,761 to 2,983,197 _RS14720 A4249_RS14725: A4249_RS14725 - Fur family transcriptional regulator, at 2,983,241 to 2,983,726 _RS14725 A4249_RS14730: A4249_RS14730 - GNAT family N-acetyltransferase, at 2,983,754 to 2,984,197 _RS14730 A4249_RS14735: A4249_RS14735 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,984,194 to 2,984,874 _RS14735 A4249_RS14740: A4249_RS14740 - NifU family protein, at 2,984,921 to 2,985,481 _RS14740 Position (kb) 2983 2984 2985Strain fitness (log2 ratio) -2 -1 0 1 2at 2982.830 kb on + strand, within A4249_RS14720at 2982.830 kb on + strand, within A4249_RS14720at 2982.830 kb on + strand, within A4249_RS14720at 2982.830 kb on + strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.986 kb on + strand, within A4249_RS14720at 2982.986 kb on + strand, within A4249_RS14720at 2982.986 kb on + strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2983.071 kb on - strandat 2983.071 kb on - strandat 2983.107 kb on + strandat 2983.108 kb on - strandat 2983.108 kb on - strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.206 kb on + strandat 2983.206 kb on + strandat 2983.207 kb on - strandat 2983.207 kb on - strandat 2983.207 kb on - strandat 2983.207 kb on - strandat 2983.733 kb on - strandat 2983.839 kb on + strand, within A4249_RS14730at 2983.839 kb on + strand, within A4249_RS14730at 2983.839 kb on + strand, within A4249_RS14730at 2983.839 kb on + strand, within A4249_RS14730at 2983.840 kb on - strand, within A4249_RS14730at 2983.840 kb on - strand, within A4249_RS14730at 2983.840 kb on - strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.884 kb on + strand, within A4249_RS14730at 2983.884 kb on + strand, within A4249_RS14730at 2983.884 kb on + strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2984.093 kb on + strand, within A4249_RS14730at 2984.262 kb on - strand, within A4249_RS14735at 2984.885 kb on + strandat 2984.885 kb on + strandat 2984.886 kb on - strandat 2984.886 kb on - strandat 2984.958 kb on + strandat 2984.958 kb on + strandat 2984.958 kb on + strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strandat 2984.959 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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2,982,830 + A4249_RS14720 0.74 -0.0
2,982,830 + A4249_RS14720 0.74 -1.0
2,982,830 + A4249_RS14720 0.74 -0.0
2,982,830 + A4249_RS14720 0.74 +0.1
2,982,831 - A4249_RS14720 0.74 -0.8
2,982,831 - A4249_RS14720 0.74 +0.5
2,982,831 - A4249_RS14720 0.74 -0.1
2,982,831 - A4249_RS14720 0.74 -1.3
2,982,831 - A4249_RS14720 0.74 -0.2
2,982,986 + A4249_RS14720 0.85 +1.1
2,982,986 + A4249_RS14720 0.85 -0.3
2,982,986 + A4249_RS14720 0.85 +0.6
2,982,987 - A4249_RS14720 0.85 +0.1
2,982,987 - A4249_RS14720 0.85 +0.4
2,982,987 - A4249_RS14720 0.85 +1.4
2,982,987 - A4249_RS14720 0.85 -1.0
2,983,071 - -0.9
2,983,071 - -1.2
2,983,107 + -0.0
2,983,108 - +0.3
2,983,108 - +0.2
2,983,112 + -0.4
2,983,112 + -0.1
2,983,112 + -0.5
2,983,112 + +0.5
2,983,112 + +0.2
2,983,112 + -0.1
2,983,112 + +0.3
2,983,112 + -0.9
2,983,112 + -0.1
2,983,112 + -0.9
2,983,112 + +0.8
2,983,113 - -1.2
2,983,113 - +0.3
2,983,113 - -0.8
2,983,113 - +0.0
2,983,113 - -0.2
2,983,113 - -0.5
2,983,113 - -0.0
2,983,133 + -1.2
2,983,133 + +0.2
2,983,133 + +0.2
2,983,133 + -0.2
2,983,133 + -1.7
2,983,134 - +0.4
2,983,134 - +1.2
2,983,134 - +1.5
2,983,134 - +0.2
2,983,134 - -0.4
2,983,206 + +0.1
2,983,206 + +0.3
2,983,207 - +0.6
2,983,207 - +0.3
2,983,207 - +0.0
2,983,207 - -0.3
2,983,733 - -0.7
2,983,839 + A4249_RS14730 0.19 -0.1
2,983,839 + A4249_RS14730 0.19 +0.3
2,983,839 + A4249_RS14730 0.19 -0.2
2,983,839 + A4249_RS14730 0.19 -0.6
2,983,840 - A4249_RS14730 0.19 -1.8
2,983,840 - A4249_RS14730 0.19 +1.0
2,983,840 - A4249_RS14730 0.19 +0.3
2,983,842 + A4249_RS14730 0.20 +0.6
2,983,842 + A4249_RS14730 0.20 +0.6
2,983,842 + A4249_RS14730 0.20 -0.5
2,983,842 + A4249_RS14730 0.20 +1.2
2,983,842 + A4249_RS14730 0.20 -0.8
2,983,842 + A4249_RS14730 0.20 -0.9
2,983,843 - A4249_RS14730 0.20 +0.2
2,983,843 - A4249_RS14730 0.20 +0.1
2,983,843 - A4249_RS14730 0.20 -1.1
2,983,843 - A4249_RS14730 0.20 +0.2
2,983,884 + A4249_RS14730 0.29 -0.3
2,983,884 + A4249_RS14730 0.29 -1.6
2,983,884 + A4249_RS14730 0.29 +0.4
2,983,885 - A4249_RS14730 0.30 +0.2
2,983,885 - A4249_RS14730 0.30 +0.4
2,983,885 - A4249_RS14730 0.30 +0.4
2,983,885 - A4249_RS14730 0.30 +0.2
2,983,885 - A4249_RS14730 0.30 -1.0
2,984,093 + A4249_RS14730 0.76 -1.0
2,984,262 - A4249_RS14735 0.10 +1.4
2,984,885 + +0.5
2,984,885 + -0.3
2,984,886 - +0.7
2,984,886 - +0.1
2,984,958 + -0.4
2,984,958 + -1.6
2,984,958 + -0.0
2,984,959 - -0.4
2,984,959 - +1.0
2,984,959 - +0.2
2,984,959 - +1.4
2,984,959 - +0.3
2,984,959 - +2.0
2,984,959 - -0.1
2,984,959 - +0.2

Or see this region's nucleotide sequence