Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13520

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13515 and A4249_RS13520 are separated by 0 nucleotidesA4249_RS13520 and A4249_RS13525 are separated by 84 nucleotides A4249_RS13515: A4249_RS13515 - hypothetical protein, at 2,731,056 to 2,731,952 _RS13515 A4249_RS13520: A4249_RS13520 - aminotransferase class V-fold PLP-dependent enzyme, at 2,731,953 to 2,733,113 _RS13520 A4249_RS13525: A4249_RS13525 - preprotein translocase subunit SecA, at 2,733,198 to 2,736,047 _RS13525 Position (kb) 2731 2732 2733 2734Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2731.011 kb on + strandat 2731.011 kb on + strandat 2731.011 kb on + strandat 2731.011 kb on + strandat 2731.011 kb on + strandat 2731.011 kb on + strandat 2731.011 kb on + strandat 2731.012 kb on - strandat 2731.012 kb on - strandat 2731.012 kb on - strandat 2731.019 kb on - strandat 2731.019 kb on - strandat 2731.053 kb on + strandat 2731.053 kb on + strandat 2731.053 kb on + strandat 2731.053 kb on + strandat 2731.053 kb on + strandat 2731.054 kb on - strandat 2731.054 kb on - strandat 2731.054 kb on - strandat 2731.131 kb on + strandat 2731.131 kb on + strandat 2731.132 kb on - strandat 2731.143 kb on + strandat 2731.143 kb on + strandat 2731.143 kb on + strandat 2731.144 kb on - strandat 2731.144 kb on - strandat 2731.144 kb on - strandat 2731.248 kb on + strand, within A4249_RS13515at 2731.248 kb on + strand, within A4249_RS13515at 2731.248 kb on + strand, within A4249_RS13515at 2731.248 kb on + strand, within A4249_RS13515at 2731.248 kb on + strand, within A4249_RS13515at 2731.248 kb on + strand, within A4249_RS13515at 2731.248 kb on + strand, within A4249_RS13515at 2731.248 kb on + strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.249 kb on - strand, within A4249_RS13515at 2731.250 kb on + strand, within A4249_RS13515at 2731.250 kb on + strand, within A4249_RS13515at 2731.251 kb on - strand, within A4249_RS13515at 2731.251 kb on - strand, within A4249_RS13515at 2731.260 kb on + strand, within A4249_RS13515at 2731.260 kb on + strand, within A4249_RS13515at 2731.261 kb on - strand, within A4249_RS13515at 2731.261 kb on - strand, within A4249_RS13515at 2731.338 kb on + strand, within A4249_RS13515at 2731.338 kb on + strand, within A4249_RS13515at 2731.338 kb on + strand, within A4249_RS13515at 2731.338 kb on + strand, within A4249_RS13515at 2731.338 kb on + strand, within A4249_RS13515at 2731.338 kb on + strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.339 kb on - strand, within A4249_RS13515at 2731.440 kb on + strand, within A4249_RS13515at 2731.440 kb on + strand, within A4249_RS13515at 2731.441 kb on - strand, within A4249_RS13515at 2731.570 kb on + strand, within A4249_RS13515at 2731.571 kb on - strand, within A4249_RS13515at 2731.571 kb on - strand, within A4249_RS13515at 2731.596 kb on + strand, within A4249_RS13515at 2731.597 kb on - strand, within A4249_RS13515at 2731.673 kb on + strand, within A4249_RS13515at 2731.673 kb on + strand, within A4249_RS13515at 2731.674 kb on - strand, within A4249_RS13515at 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.947 kb on + strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2731.948 kb on - strandat 2732.005 kb on + strandat 2732.005 kb on + strandat 2732.005 kb on + strandat 2732.005 kb on + strandat 2732.005 kb on + strandat 2732.005 kb on + strandat 2732.005 kb on + strandat 2732.006 kb on - strandat 2732.006 kb on - strandat 2732.006 kb on - strandat 2732.006 kb on - strandat 2732.006 kb on - strandat 2732.006 kb on - strandat 2732.006 kb on - strandat 2732.294 kb on - strand, within A4249_RS13520at 2732.294 kb on - strand, within A4249_RS13520at 2732.294 kb on - strand, within A4249_RS13520at 2732.347 kb on + strand, within A4249_RS13520at 2732.470 kb on + strand, within A4249_RS13520at 2732.470 kb on + strand, within A4249_RS13520at 2732.470 kb on + strand, within A4249_RS13520at 2732.470 kb on + strand, within A4249_RS13520at 2732.470 kb on + strand, within A4249_RS13520at 2732.470 kb on + strand, within A4249_RS13520at 2732.471 kb on - strand, within A4249_RS13520at 2732.471 kb on - strand, within A4249_RS13520at 2732.471 kb on - strand, within A4249_RS13520at 2732.471 kb on - strand, within A4249_RS13520at 2732.471 kb on - strand, within A4249_RS13520at 2732.491 kb on + strand, within A4249_RS13520at 2732.491 kb on + strand, within A4249_RS13520at 2732.491 kb on + strand, within A4249_RS13520at 2732.491 kb on + strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.492 kb on - strand, within A4249_RS13520at 2732.548 kb on + strand, within A4249_RS13520at 2732.548 kb on + strand, within A4249_RS13520at 2732.548 kb on + strand, within A4249_RS13520at 2732.688 kb on - strand, within A4249_RS13520at 2732.810 kb on + strand, within A4249_RS13520at 2732.810 kb on + strand, within A4249_RS13520at 2732.829 kb on + strand, within A4249_RS13520at 2732.829 kb on + strand, within A4249_RS13520at 2733.106 kb on + strandat 2733.106 kb on + strandat 2733.106 kb on + strandat 2733.106 kb on + strandat 2733.106 kb on + strandat 2733.106 kb on + strandat 2733.106 kb on + strandat 2733.107 kb on - strandat 2733.107 kb on - strandat 2733.107 kb on - strandat 2733.107 kb on - strandat 2733.107 kb on - strandat 2733.107 kb on - strandat 2733.124 kb on + strandat 2733.125 kb on - strandat 2733.125 kb on - strandat 2733.125 kb on - strandat 2733.125 kb on - strandat 2733.125 kb on - strandat 2733.200 kb on - strandat 2733.200 kb on - strandat 2733.200 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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2,731,011 + -0.4
2,731,011 + +0.4
2,731,011 + +2.2
2,731,011 + +0.6
2,731,011 + +0.1
2,731,011 + +0.2
2,731,011 + -0.6
2,731,012 - +0.2
2,731,012 - +1.2
2,731,012 - -0.4
2,731,019 - -1.8
2,731,019 - +0.9
2,731,053 + +1.1
2,731,053 + +0.7
2,731,053 + +0.4
2,731,053 + +0.5
2,731,053 + +0.1
2,731,054 - +3.0
2,731,054 - -0.1
2,731,054 - -0.5
2,731,131 + +0.7
2,731,131 + +1.1
2,731,132 - -0.2
2,731,143 + +0.8
2,731,143 + +0.8
2,731,143 + -0.6
2,731,144 - +0.1
2,731,144 - +0.4
2,731,144 - +0.6
2,731,248 + A4249_RS13515 0.21 -1.3
2,731,248 + A4249_RS13515 0.21 -0.0
2,731,248 + A4249_RS13515 0.21 +0.1
2,731,248 + A4249_RS13515 0.21 -0.6
2,731,248 + A4249_RS13515 0.21 -0.5
2,731,248 + A4249_RS13515 0.21 +0.3
2,731,248 + A4249_RS13515 0.21 -0.6
2,731,248 + A4249_RS13515 0.21 -0.1
2,731,249 - A4249_RS13515 0.22 -0.4
2,731,249 - A4249_RS13515 0.22 +0.7
2,731,249 - A4249_RS13515 0.22 -0.3
2,731,249 - A4249_RS13515 0.22 +0.2
2,731,249 - A4249_RS13515 0.22 -0.7
2,731,249 - A4249_RS13515 0.22 -0.5
2,731,249 - A4249_RS13515 0.22 +0.6
2,731,249 - A4249_RS13515 0.22 +0.9
2,731,249 - A4249_RS13515 0.22 -1.2
2,731,249 - A4249_RS13515 0.22 +0.3
2,731,249 - A4249_RS13515 0.22 +0.3
2,731,250 + A4249_RS13515 0.22 +0.3
2,731,250 + A4249_RS13515 0.22 +1.0
2,731,251 - A4249_RS13515 0.22 -0.2
2,731,251 - A4249_RS13515 0.22 -1.3
2,731,260 + A4249_RS13515 0.23 +0.1
2,731,260 + A4249_RS13515 0.23 +0.3
2,731,261 - A4249_RS13515 0.23 -0.2
2,731,261 - A4249_RS13515 0.23 -0.1
2,731,338 + A4249_RS13515 0.31 +0.7
2,731,338 + A4249_RS13515 0.31 -1.1
2,731,338 + A4249_RS13515 0.31 +0.4
2,731,338 + A4249_RS13515 0.31 +0.8
2,731,338 + A4249_RS13515 0.31 +0.0
2,731,338 + A4249_RS13515 0.31 +0.3
2,731,339 - A4249_RS13515 0.32 +0.2
2,731,339 - A4249_RS13515 0.32 +0.9
2,731,339 - A4249_RS13515 0.32 -1.5
2,731,339 - A4249_RS13515 0.32 +0.3
2,731,339 - A4249_RS13515 0.32 +0.5
2,731,339 - A4249_RS13515 0.32 +0.2
2,731,339 - A4249_RS13515 0.32 +0.9
2,731,339 - A4249_RS13515 0.32 +0.9
2,731,440 + A4249_RS13515 0.43 -1.2
2,731,440 + A4249_RS13515 0.43 -0.4
2,731,441 - A4249_RS13515 0.43 +0.4
2,731,570 + A4249_RS13515 0.57 -1.7
2,731,571 - A4249_RS13515 0.57 +0.2
2,731,571 - A4249_RS13515 0.57 -1.2
2,731,596 + A4249_RS13515 0.60 -0.5
2,731,597 - A4249_RS13515 0.60 -0.0
2,731,673 + A4249_RS13515 0.69 -0.4
2,731,673 + A4249_RS13515 0.69 -0.1
2,731,674 - A4249_RS13515 0.69 -2.3
2,731,947 + +0.4
2,731,947 + -0.2
2,731,947 + -0.0
2,731,947 + -0.0
2,731,947 + +0.5
2,731,947 + -0.6
2,731,947 + +1.2
2,731,947 + -0.3
2,731,947 + -0.2
2,731,947 + -1.0
2,731,947 + -0.1
2,731,947 + -0.3
2,731,947 + +0.7
2,731,947 + -0.4
2,731,947 + -0.5
2,731,948 - -0.0
2,731,948 - -0.6
2,731,948 - +0.0
2,731,948 - -0.4
2,731,948 - -1.5
2,731,948 - -1.7
2,731,948 - -0.8
2,731,948 - +0.2
2,731,948 - -0.3
2,732,005 + -0.7
2,732,005 + -0.0
2,732,005 + +0.0
2,732,005 + +0.6
2,732,005 + -0.3
2,732,005 + +1.3
2,732,005 + -1.1
2,732,006 - +0.4
2,732,006 - +0.3
2,732,006 - +0.8
2,732,006 - +0.6
2,732,006 - +0.1
2,732,006 - -0.0
2,732,006 - -0.0
2,732,294 - A4249_RS13520 0.29 -0.3
2,732,294 - A4249_RS13520 0.29 -2.0
2,732,294 - A4249_RS13520 0.29 +0.6
2,732,347 + A4249_RS13520 0.34 +1.1
2,732,470 + A4249_RS13520 0.45 -0.8
2,732,470 + A4249_RS13520 0.45 -0.0
2,732,470 + A4249_RS13520 0.45 +0.4
2,732,470 + A4249_RS13520 0.45 -1.0
2,732,470 + A4249_RS13520 0.45 -0.3
2,732,470 + A4249_RS13520 0.45 -0.1
2,732,471 - A4249_RS13520 0.45 -0.2
2,732,471 - A4249_RS13520 0.45 -0.7
2,732,471 - A4249_RS13520 0.45 +0.4
2,732,471 - A4249_RS13520 0.45 -0.1
2,732,471 - A4249_RS13520 0.45 +0.6
2,732,491 + A4249_RS13520 0.46 -0.6
2,732,491 + A4249_RS13520 0.46 +0.6
2,732,491 + A4249_RS13520 0.46 +0.3
2,732,491 + A4249_RS13520 0.46 -0.2
2,732,492 - A4249_RS13520 0.46 +0.5
2,732,492 - A4249_RS13520 0.46 -0.3
2,732,492 - A4249_RS13520 0.46 -0.5
2,732,492 - A4249_RS13520 0.46 -0.1
2,732,492 - A4249_RS13520 0.46 +0.9
2,732,492 - A4249_RS13520 0.46 +1.0
2,732,492 - A4249_RS13520 0.46 -0.7
2,732,492 - A4249_RS13520 0.46 -0.1
2,732,492 - A4249_RS13520 0.46 +0.0
2,732,492 - A4249_RS13520 0.46 -1.5
2,732,492 - A4249_RS13520 0.46 +0.6
2,732,492 - A4249_RS13520 0.46 -0.7
2,732,492 - A4249_RS13520 0.46 -0.6
2,732,492 - A4249_RS13520 0.46 +0.4
2,732,492 - A4249_RS13520 0.46 +0.5
2,732,492 - A4249_RS13520 0.46 +0.8
2,732,492 - A4249_RS13520 0.46 +0.7
2,732,492 - A4249_RS13520 0.46 -0.3
2,732,492 - A4249_RS13520 0.46 -0.2
2,732,548 + A4249_RS13520 0.51 -1.5
2,732,548 + A4249_RS13520 0.51 +0.6
2,732,548 + A4249_RS13520 0.51 -0.1
2,732,688 - A4249_RS13520 0.63 +0.8
2,732,810 + A4249_RS13520 0.74 +0.0
2,732,810 + A4249_RS13520 0.74 -2.3
2,732,829 + A4249_RS13520 0.75 +0.4
2,732,829 + A4249_RS13520 0.75 +0.5
2,733,106 + -0.8
2,733,106 + -0.2
2,733,106 + -0.1
2,733,106 + +1.0
2,733,106 + +0.5
2,733,106 + +0.2
2,733,106 + -0.5
2,733,107 - -0.1
2,733,107 - -0.5
2,733,107 - +0.4
2,733,107 - -0.7
2,733,107 - -0.2
2,733,107 - -0.2
2,733,124 + -0.2
2,733,125 - -2.1
2,733,125 - -0.3
2,733,125 - -0.1
2,733,125 - +0.8
2,733,125 - +0.2
2,733,200 - -0.3
2,733,200 - +0.5
2,733,200 - +0.4

Or see this region's nucleotide sequence