Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07220

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07215 and A4249_RS07220 are separated by 100 nucleotidesA4249_RS07220 and A4249_RS07225 are separated by 64 nucleotides A4249_RS07215: A4249_RS07215 - dicarboxylate/amino acid:cation symporter, at 1,444,682 to 1,445,971 _RS07215 A4249_RS07220: A4249_RS07220 - HAD-IA family hydrolase, at 1,446,072 to 1,446,785 _RS07220 A4249_RS07225: A4249_RS07225 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 1,446,850 to 1,448,202 _RS07225 Position (kb) 1446 1447Strain fitness (log2 ratio) -3 -2 -1 0 1at 1445.121 kb on + strand, within A4249_RS07215at 1445.121 kb on + strand, within A4249_RS07215at 1445.122 kb on - strand, within A4249_RS07215at 1445.277 kb on + strand, within A4249_RS07215at 1445.278 kb on - strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.844 kb on + strandat 1445.844 kb on + strandat 1445.844 kb on + strandat 1445.845 kb on - strandat 1445.845 kb on - strandat 1445.845 kb on - strandat 1446.093 kb on + strandat 1446.094 kb on - strandat 1446.094 kb on - strandat 1446.094 kb on - strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.097 kb on + strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.098 kb on - strandat 1446.191 kb on + strand, within A4249_RS07220at 1446.234 kb on - strand, within A4249_RS07220at 1446.428 kb on + strand, within A4249_RS07220at 1446.428 kb on + strand, within A4249_RS07220at 1446.428 kb on + strand, within A4249_RS07220at 1446.428 kb on + strand, within A4249_RS07220at 1446.428 kb on + strand, within A4249_RS07220at 1446.429 kb on - strand, within A4249_RS07220at 1446.429 kb on - strand, within A4249_RS07220at 1446.429 kb on - strand, within A4249_RS07220at 1446.529 kb on + strand, within A4249_RS07220at 1446.529 kb on + strand, within A4249_RS07220at 1446.529 kb on + strand, within A4249_RS07220at 1446.530 kb on - strand, within A4249_RS07220at 1446.530 kb on - strand, within A4249_RS07220at 1446.816 kb on + strandat 1446.816 kb on + strandat 1446.816 kb on + strandat 1446.817 kb on - strandat 1446.817 kb on - strandat 1446.832 kb on + strandat 1446.832 kb on + strandat 1446.833 kb on - strandat 1446.833 kb on - strandat 1446.833 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,445,121 + A4249_RS07215 0.34 +0.2
1,445,121 + A4249_RS07215 0.34 +0.0
1,445,122 - A4249_RS07215 0.34 -0.8
1,445,277 + A4249_RS07215 0.46 -0.2
1,445,278 - A4249_RS07215 0.46 +0.2
1,445,310 + A4249_RS07215 0.49 -1.6
1,445,310 + A4249_RS07215 0.49 +0.4
1,445,310 + A4249_RS07215 0.49 -0.7
1,445,310 + A4249_RS07215 0.49 +0.6
1,445,310 + A4249_RS07215 0.49 +0.8
1,445,310 + A4249_RS07215 0.49 -0.1
1,445,310 + A4249_RS07215 0.49 +1.6
1,445,310 + A4249_RS07215 0.49 -0.1
1,445,310 + A4249_RS07215 0.49 +0.0
1,445,310 + A4249_RS07215 0.49 -0.3
1,445,310 + A4249_RS07215 0.49 +1.5
1,445,310 + A4249_RS07215 0.49 +0.6
1,445,310 + A4249_RS07215 0.49 -1.3
1,445,310 + A4249_RS07215 0.49 +0.5
1,445,310 + A4249_RS07215 0.49 +0.1
1,445,310 + A4249_RS07215 0.49 -0.6
1,445,311 - A4249_RS07215 0.49 -2.3
1,445,311 - A4249_RS07215 0.49 -0.0
1,445,311 - A4249_RS07215 0.49 +0.7
1,445,311 - A4249_RS07215 0.49 +0.4
1,445,311 - A4249_RS07215 0.49 -1.9
1,445,311 - A4249_RS07215 0.49 -0.5
1,445,311 - A4249_RS07215 0.49 -0.6
1,445,311 - A4249_RS07215 0.49 +1.6
1,445,311 - A4249_RS07215 0.49 +0.0
1,445,311 - A4249_RS07215 0.49 +0.0
1,445,311 - A4249_RS07215 0.49 +0.2
1,445,844 + -0.0
1,445,844 + +1.5
1,445,844 + -0.0
1,445,845 - +0.4
1,445,845 - -0.5
1,445,845 - -2.6
1,446,093 + -0.2
1,446,094 - -0.3
1,446,094 - -1.3
1,446,094 - -0.2
1,446,097 + +0.6
1,446,097 + +0.1
1,446,097 + +0.6
1,446,097 + +0.6
1,446,097 + -0.1
1,446,097 + +1.3
1,446,097 + +0.7
1,446,097 + -0.3
1,446,097 + +0.8
1,446,097 + +0.2
1,446,097 + +0.1
1,446,098 - -2.3
1,446,098 - +0.1
1,446,098 - -0.4
1,446,098 - -2.1
1,446,098 - -0.4
1,446,098 - -1.3
1,446,098 - -0.7
1,446,098 - +0.0
1,446,098 - -0.7
1,446,098 - -0.4
1,446,191 + A4249_RS07220 0.17 -0.8
1,446,234 - A4249_RS07220 0.23 -0.1
1,446,428 + A4249_RS07220 0.50 +0.5
1,446,428 + A4249_RS07220 0.50 +1.0
1,446,428 + A4249_RS07220 0.50 +0.4
1,446,428 + A4249_RS07220 0.50 -0.4
1,446,428 + A4249_RS07220 0.50 -0.2
1,446,429 - A4249_RS07220 0.50 +0.1
1,446,429 - A4249_RS07220 0.50 +0.8
1,446,429 - A4249_RS07220 0.50 +0.8
1,446,529 + A4249_RS07220 0.64 -1.1
1,446,529 + A4249_RS07220 0.64 +1.0
1,446,529 + A4249_RS07220 0.64 -2.9
1,446,530 - A4249_RS07220 0.64 -0.1
1,446,530 - A4249_RS07220 0.64 -0.3
1,446,816 + +0.6
1,446,816 + -0.5
1,446,816 + +0.2
1,446,817 - +0.6
1,446,817 - +0.0
1,446,832 + +0.1
1,446,832 + +0.7
1,446,833 - -1.2
1,446,833 - +1.7
1,446,833 - -1.3

Or see this region's nucleotide sequence