Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07180

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07170 and A4249_RS07175 overlap by 4 nucleotidesA4249_RS07175 and A4249_RS07180 are separated by 327 nucleotidesA4249_RS07180 and A4249_RS07185 overlap by 4 nucleotidesA4249_RS07185 and A4249_RS07190 overlap by 32 nucleotidesA4249_RS07190 and A4249_RS07195 are separated by 245 nucleotides A4249_RS07170: A4249_RS07170 - hypothetical protein, at 1,440,699 to 1,441,028 _RS07170 A4249_RS07175: A4249_RS07175 - hypothetical protein, at 1,441,025 to 1,441,546 _RS07175 A4249_RS07180: A4249_RS07180 - hypothetical protein, at 1,441,874 to 1,442,500 _RS07180 A4249_RS07185: A4249_RS07185 - hypothetical protein, at 1,442,497 to 1,442,886 _RS07185 A4249_RS07190: A4249_RS07190 - hypothetical protein, at 1,442,855 to 1,443,043 _RS07190 A4249_RS07195: A4249_RS07195 - hypothetical protein, at 1,443,289 to 1,443,525 _RS07195 Position (kb) 1441 1442 1443Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1441.052 kb on + strandat 1441.052 kb on + strandat 1441.052 kb on + strandat 1441.053 kb on - strandat 1441.053 kb on - strandat 1441.053 kb on - strandat 1441.053 kb on - strandat 1441.053 kb on - strandat 1441.053 kb on - strandat 1441.102 kb on + strand, within A4249_RS07175at 1441.102 kb on + strand, within A4249_RS07175at 1441.102 kb on + strand, within A4249_RS07175at 1441.103 kb on - strand, within A4249_RS07175at 1441.103 kb on - strand, within A4249_RS07175at 1441.103 kb on - strand, within A4249_RS07175at 1441.103 kb on - strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.121 kb on + strand, within A4249_RS07175at 1441.122 kb on - strand, within A4249_RS07175at 1441.122 kb on - strand, within A4249_RS07175at 1441.193 kb on + strand, within A4249_RS07175at 1441.194 kb on - strand, within A4249_RS07175at 1441.227 kb on + strand, within A4249_RS07175at 1441.227 kb on + strand, within A4249_RS07175at 1441.228 kb on - strand, within A4249_RS07175at 1441.228 kb on - strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.240 kb on + strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.241 kb on - strand, within A4249_RS07175at 1441.295 kb on + strand, within A4249_RS07175at 1441.296 kb on - strand, within A4249_RS07175at 1441.296 kb on - strand, within A4249_RS07175at 1441.296 kb on - strand, within A4249_RS07175at 1441.296 kb on - strand, within A4249_RS07175at 1441.623 kb on + strandat 1441.709 kb on + strandat 1441.709 kb on + strandat 1441.710 kb on - strandat 1441.710 kb on - strandat 1441.710 kb on - strandat 1441.710 kb on - strandat 1441.710 kb on - strandat 1441.710 kb on - strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.791 kb on + strandat 1441.792 kb on - strandat 1441.792 kb on - strandat 1441.792 kb on - strandat 1441.792 kb on - strandat 1441.792 kb on - strandat 1441.815 kb on + strandat 1441.815 kb on + strandat 1441.815 kb on + strandat 1441.816 kb on - strandat 1441.816 kb on - strandat 1441.816 kb on - strandat 1442.060 kb on + strand, within A4249_RS07180at 1442.060 kb on + strand, within A4249_RS07180at 1442.060 kb on + strand, within A4249_RS07180at 1442.060 kb on + strand, within A4249_RS07180at 1442.060 kb on + strand, within A4249_RS07180at 1442.061 kb on - strand, within A4249_RS07180at 1442.061 kb on - strand, within A4249_RS07180at 1442.061 kb on - strand, within A4249_RS07180at 1442.061 kb on - strand, within A4249_RS07180at 1442.061 kb on - strand, within A4249_RS07180at 1442.061 kb on - strand, within A4249_RS07180at 1442.061 kb on - strand, within A4249_RS07180at 1442.173 kb on + strand, within A4249_RS07180at 1442.173 kb on + strand, within A4249_RS07180at 1442.173 kb on + strand, within A4249_RS07180at 1442.174 kb on - strand, within A4249_RS07180at 1442.174 kb on - strand, within A4249_RS07180at 1442.180 kb on + strand, within A4249_RS07180at 1442.180 kb on + strand, within A4249_RS07180at 1442.180 kb on + strand, within A4249_RS07180at 1442.180 kb on + strand, within A4249_RS07180at 1442.181 kb on - strand, within A4249_RS07180at 1442.181 kb on - strand, within A4249_RS07180at 1442.181 kb on - strand, within A4249_RS07180at 1442.181 kb on - strand, within A4249_RS07180at 1442.181 kb on - strand, within A4249_RS07180at 1442.282 kb on + strand, within A4249_RS07180at 1442.283 kb on - strand, within A4249_RS07180at 1442.283 kb on - strand, within A4249_RS07180at 1442.283 kb on - strand, within A4249_RS07180at 1442.596 kb on + strand, within A4249_RS07185at 1442.596 kb on + strand, within A4249_RS07185at 1442.596 kb on + strand, within A4249_RS07185at 1442.796 kb on + strand, within A4249_RS07185at 1442.797 kb on - strand, within A4249_RS07185at 1442.797 kb on - strand, within A4249_RS07185at 1442.797 kb on - strand, within A4249_RS07185at 1442.797 kb on - strand, within A4249_RS07185at 1442.921 kb on + strand, within A4249_RS07190at 1442.921 kb on + strand, within A4249_RS07190at 1442.921 kb on + strand, within A4249_RS07190at 1442.921 kb on + strand, within A4249_RS07190at 1442.922 kb on - strand, within A4249_RS07190at 1442.922 kb on - strand, within A4249_RS07190at 1442.922 kb on - strand, within A4249_RS07190at 1442.922 kb on - strand, within A4249_RS07190at 1442.922 kb on - strand, within A4249_RS07190at 1442.922 kb on - strand, within A4249_RS07190at 1442.922 kb on - strand, within A4249_RS07190at 1443.041 kb on + strandat 1443.042 kb on - strandat 1443.042 kb on - strandat 1443.042 kb on - strandat 1443.042 kb on - strandat 1443.042 kb on - strandat 1443.057 kb on + strandat 1443.150 kb on + strandat 1443.150 kb on + strandat 1443.187 kb on + strandat 1443.188 kb on - strandat 1443.207 kb on + strandat 1443.207 kb on + strandat 1443.207 kb on + strandat 1443.207 kb on + strandat 1443.208 kb on - strandat 1443.208 kb on - strandat 1443.208 kb on - strandat 1443.208 kb on - strandat 1443.208 kb on - strandat 1443.229 kb on + strandat 1443.229 kb on + strandat 1443.229 kb on + strandat 1443.230 kb on - strandat 1443.230 kb on - strandat 1443.258 kb on + strandat 1443.258 kb on + strandat 1443.259 kb on - strandat 1443.259 kb on - strandat 1443.368 kb on + strand, within A4249_RS07195at 1443.384 kb on + strand, within A4249_RS07195at 1443.387 kb on + strand, within A4249_RS07195at 1443.388 kb on - strand, within A4249_RS07195at 1443.388 kb on - strand, within A4249_RS07195

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,441,052 + +0.8
1,441,052 + +0.3
1,441,052 + -1.0
1,441,053 - -0.5
1,441,053 - +0.7
1,441,053 - -0.3
1,441,053 - +0.7
1,441,053 - +0.3
1,441,053 - +0.2
1,441,102 + A4249_RS07175 0.15 +0.3
1,441,102 + A4249_RS07175 0.15 +0.1
1,441,102 + A4249_RS07175 0.15 -1.4
1,441,103 - A4249_RS07175 0.15 -0.7
1,441,103 - A4249_RS07175 0.15 -1.0
1,441,103 - A4249_RS07175 0.15 -1.0
1,441,103 - A4249_RS07175 0.15 +1.6
1,441,121 + A4249_RS07175 0.18 -1.1
1,441,121 + A4249_RS07175 0.18 +1.2
1,441,121 + A4249_RS07175 0.18 -1.9
1,441,121 + A4249_RS07175 0.18 +0.3
1,441,121 + A4249_RS07175 0.18 +1.3
1,441,121 + A4249_RS07175 0.18 -0.3
1,441,121 + A4249_RS07175 0.18 -0.1
1,441,121 + A4249_RS07175 0.18 -0.4
1,441,122 - A4249_RS07175 0.19 -1.3
1,441,122 - A4249_RS07175 0.19 +0.1
1,441,193 + A4249_RS07175 0.32 +0.3
1,441,194 - A4249_RS07175 0.32 -0.8
1,441,227 + A4249_RS07175 0.39 +0.6
1,441,227 + A4249_RS07175 0.39 +0.7
1,441,228 - A4249_RS07175 0.39 +0.6
1,441,228 - A4249_RS07175 0.39 +0.1
1,441,240 + A4249_RS07175 0.41 +0.3
1,441,240 + A4249_RS07175 0.41 -0.3
1,441,240 + A4249_RS07175 0.41 -1.6
1,441,240 + A4249_RS07175 0.41 -1.6
1,441,240 + A4249_RS07175 0.41 +0.1
1,441,240 + A4249_RS07175 0.41 +0.2
1,441,240 + A4249_RS07175 0.41 +1.8
1,441,240 + A4249_RS07175 0.41 +0.4
1,441,240 + A4249_RS07175 0.41 -0.5
1,441,240 + A4249_RS07175 0.41 -0.7
1,441,240 + A4249_RS07175 0.41 +0.9
1,441,240 + A4249_RS07175 0.41 -0.2
1,441,240 + A4249_RS07175 0.41 +1.8
1,441,240 + A4249_RS07175 0.41 +0.6
1,441,241 - A4249_RS07175 0.41 -1.0
1,441,241 - A4249_RS07175 0.41 +0.5
1,441,241 - A4249_RS07175 0.41 +0.3
1,441,241 - A4249_RS07175 0.41 -0.2
1,441,241 - A4249_RS07175 0.41 -0.2
1,441,241 - A4249_RS07175 0.41 -0.7
1,441,241 - A4249_RS07175 0.41 -0.2
1,441,241 - A4249_RS07175 0.41 -0.1
1,441,241 - A4249_RS07175 0.41 +0.3
1,441,241 - A4249_RS07175 0.41 -2.5
1,441,241 - A4249_RS07175 0.41 -0.8
1,441,241 - A4249_RS07175 0.41 -0.0
1,441,241 - A4249_RS07175 0.41 +0.1
1,441,241 - A4249_RS07175 0.41 -0.0
1,441,241 - A4249_RS07175 0.41 +0.1
1,441,241 - A4249_RS07175 0.41 +0.7
1,441,241 - A4249_RS07175 0.41 +0.8
1,441,241 - A4249_RS07175 0.41 -0.5
1,441,295 + A4249_RS07175 0.52 -1.1
1,441,296 - A4249_RS07175 0.52 -0.3
1,441,296 - A4249_RS07175 0.52 +0.6
1,441,296 - A4249_RS07175 0.52 -1.3
1,441,296 - A4249_RS07175 0.52 -0.4
1,441,623 + +0.6
1,441,709 + +0.4
1,441,709 + -0.4
1,441,710 - -0.1
1,441,710 - -1.1
1,441,710 - -1.4
1,441,710 - -0.5
1,441,710 - -0.0
1,441,710 - -0.3
1,441,791 + +0.7
1,441,791 + -0.6
1,441,791 + +0.1
1,441,791 + +0.3
1,441,791 + +1.8
1,441,791 + -2.1
1,441,791 + -0.4
1,441,791 + -0.4
1,441,791 + +1.3
1,441,792 - -1.7
1,441,792 - +0.3
1,441,792 - +0.0
1,441,792 - +1.6
1,441,792 - -0.5
1,441,815 + -1.8
1,441,815 + -0.4
1,441,815 + -2.3
1,441,816 - -0.3
1,441,816 - -0.3
1,441,816 - -3.0
1,442,060 + A4249_RS07180 0.30 -0.6
1,442,060 + A4249_RS07180 0.30 +0.1
1,442,060 + A4249_RS07180 0.30 +0.5
1,442,060 + A4249_RS07180 0.30 +0.3
1,442,060 + A4249_RS07180 0.30 -1.4
1,442,061 - A4249_RS07180 0.30 -0.9
1,442,061 - A4249_RS07180 0.30 +0.9
1,442,061 - A4249_RS07180 0.30 +0.0
1,442,061 - A4249_RS07180 0.30 +0.3
1,442,061 - A4249_RS07180 0.30 -1.4
1,442,061 - A4249_RS07180 0.30 +0.4
1,442,061 - A4249_RS07180 0.30 -0.1
1,442,173 + A4249_RS07180 0.48 +0.2
1,442,173 + A4249_RS07180 0.48 -0.6
1,442,173 + A4249_RS07180 0.48 -0.5
1,442,174 - A4249_RS07180 0.48 -0.1
1,442,174 - A4249_RS07180 0.48 -1.6
1,442,180 + A4249_RS07180 0.49 +0.0
1,442,180 + A4249_RS07180 0.49 -0.3
1,442,180 + A4249_RS07180 0.49 -0.3
1,442,180 + A4249_RS07180 0.49 -0.1
1,442,181 - A4249_RS07180 0.49 +0.4
1,442,181 - A4249_RS07180 0.49 -0.7
1,442,181 - A4249_RS07180 0.49 +0.2
1,442,181 - A4249_RS07180 0.49 -1.1
1,442,181 - A4249_RS07180 0.49 -0.2
1,442,282 + A4249_RS07180 0.65 +0.5
1,442,283 - A4249_RS07180 0.65 -0.2
1,442,283 - A4249_RS07180 0.65 -0.7
1,442,283 - A4249_RS07180 0.65 +0.2
1,442,596 + A4249_RS07185 0.25 -0.4
1,442,596 + A4249_RS07185 0.25 -2.4
1,442,596 + A4249_RS07185 0.25 +2.3
1,442,796 + A4249_RS07185 0.77 -0.2
1,442,797 - A4249_RS07185 0.77 -1.0
1,442,797 - A4249_RS07185 0.77 -0.2
1,442,797 - A4249_RS07185 0.77 -0.5
1,442,797 - A4249_RS07185 0.77 -0.4
1,442,921 + A4249_RS07190 0.35 -0.1
1,442,921 + A4249_RS07190 0.35 -0.7
1,442,921 + A4249_RS07190 0.35 -0.7
1,442,921 + A4249_RS07190 0.35 -0.4
1,442,922 - A4249_RS07190 0.35 -0.2
1,442,922 - A4249_RS07190 0.35 +0.9
1,442,922 - A4249_RS07190 0.35 +0.2
1,442,922 - A4249_RS07190 0.35 +0.1
1,442,922 - A4249_RS07190 0.35 +0.1
1,442,922 - A4249_RS07190 0.35 -2.1
1,442,922 - A4249_RS07190 0.35 +0.0
1,443,041 + -0.7
1,443,042 - +0.2
1,443,042 - -3.0
1,443,042 - +0.1
1,443,042 - +0.1
1,443,042 - -0.8
1,443,057 + -3.0
1,443,150 + -0.3
1,443,150 + -0.9
1,443,187 + -0.0
1,443,188 - +1.7
1,443,207 + -0.7
1,443,207 + +0.8
1,443,207 + +0.6
1,443,207 + +1.5
1,443,208 - -1.2
1,443,208 - +0.6
1,443,208 - -1.2
1,443,208 - -0.3
1,443,208 - -0.6
1,443,229 + -0.4
1,443,229 + -0.4
1,443,229 + +0.1
1,443,230 - -0.3
1,443,230 - -0.2
1,443,258 + +0.4
1,443,258 + -0.3
1,443,259 - -1.0
1,443,259 - -0.8
1,443,368 + A4249_RS07195 0.33 +0.6
1,443,384 + A4249_RS07195 0.40 +0.2
1,443,387 + A4249_RS07195 0.41 +1.0
1,443,388 - A4249_RS07195 0.42 +0.1
1,443,388 - A4249_RS07195 0.42 +0.4

Or see this region's nucleotide sequence