Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06790

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06785 and A4249_RS06790 are separated by 1 nucleotidesA4249_RS06790 and A4249_RS06795 are separated by 151 nucleotidesA4249_RS06795 and A4249_RS06800 are separated by 179 nucleotides A4249_RS06785: A4249_RS06785 - endolytic transglycosylase MltG, at 1,382,498 to 1,383,658 _RS06785 A4249_RS06790: A4249_RS06790 - beta-ketoacyl-ACP synthase II, at 1,383,660 to 1,384,931 _RS06790 A4249_RS06795: A4249_RS06795 - acyl carrier protein, at 1,385,083 to 1,385,322 _RS06795 A4249_RS06800: A4249_RS06800 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 1,385,502 to 1,386,242 _RS06800 Position (kb) 1383 1384 1385Strain fitness (log2 ratio) -2 -1 0 1 2at 1382.694 kb on + strand, within A4249_RS06785at 1382.694 kb on + strand, within A4249_RS06785at 1382.832 kb on + strand, within A4249_RS06785at 1383.162 kb on + strand, within A4249_RS06785at 1383.162 kb on + strand, within A4249_RS06785at 1383.162 kb on + strand, within A4249_RS06785at 1383.163 kb on - strand, within A4249_RS06785at 1383.163 kb on - strand, within A4249_RS06785at 1383.163 kb on - strand, within A4249_RS06785at 1383.354 kb on + strand, within A4249_RS06785at 1383.531 kb on + strand, within A4249_RS06785at 1383.534 kb on + strand, within A4249_RS06785at 1383.535 kb on - strand, within A4249_RS06785at 1384.947 kb on - strandat 1384.947 kb on - strandat 1384.947 kb on - strandat 1385.001 kb on - strandat 1385.001 kb on - strandat 1385.001 kb on - strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.503 kb on + strandat 1385.504 kb on - strandat 1385.504 kb on - strandat 1385.504 kb on - strandat 1385.504 kb on - strandat 1385.504 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,382,694 + A4249_RS06785 0.17 +0.2
1,382,694 + A4249_RS06785 0.17 +2.0
1,382,832 + A4249_RS06785 0.29 -1.5
1,383,162 + A4249_RS06785 0.57 -1.0
1,383,162 + A4249_RS06785 0.57 +0.2
1,383,162 + A4249_RS06785 0.57 +0.0
1,383,163 - A4249_RS06785 0.57 +0.1
1,383,163 - A4249_RS06785 0.57 -1.0
1,383,163 - A4249_RS06785 0.57 +0.3
1,383,354 + A4249_RS06785 0.74 +1.0
1,383,531 + A4249_RS06785 0.89 +0.4
1,383,534 + A4249_RS06785 0.89 +0.5
1,383,535 - A4249_RS06785 0.89 -1.2
1,384,947 - -0.1
1,384,947 - +0.3
1,384,947 - -1.9
1,385,001 - -0.5
1,385,001 - -0.7
1,385,001 - +0.2
1,385,503 + +1.3
1,385,503 + +1.4
1,385,503 + +0.7
1,385,503 + +0.8
1,385,503 + -0.3
1,385,503 + -0.7
1,385,503 + +1.7
1,385,504 - -1.0
1,385,504 - +0.1
1,385,504 - -0.1
1,385,504 - -0.9
1,385,504 - +0.0

Or see this region's nucleotide sequence