Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS04730

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04725 and A4249_RS04730 are separated by 10 nucleotidesA4249_RS04730 and A4249_RS04735 are separated by 73 nucleotidesA4249_RS04735 and A4249_RS04740 are separated by 105 nucleotides A4249_RS04725: A4249_RS04725 - acyl-CoA dehydrogenase, at 982,365 to 983,483 _RS04725 A4249_RS04730: A4249_RS04730 - Hsp70 family protein, at 983,494 to 984,813 _RS04730 A4249_RS04735: A4249_RS04735 - tRNA-Ser, at 984,887 to 984,976 _RS04735 A4249_RS04740: A4249_RS04740 - septal ring lytic transglycosylase RlpA family protein, at 985,082 to 985,921 _RS04740 Position (kb) 983 984 985Strain fitness (log2 ratio) -2 -1 0 1 2at 982.630 kb on - strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.897 kb on + strand, within A4249_RS04725at 982.898 kb on - strand, within A4249_RS04725at 982.898 kb on - strand, within A4249_RS04725at 982.898 kb on - strand, within A4249_RS04725at 982.898 kb on - strand, within A4249_RS04725at 982.898 kb on - strand, within A4249_RS04725at 982.961 kb on + strand, within A4249_RS04725at 982.961 kb on + strand, within A4249_RS04725at 982.961 kb on + strand, within A4249_RS04725at 982.962 kb on - strand, within A4249_RS04725at 982.962 kb on - strand, within A4249_RS04725at 983.130 kb on + strand, within A4249_RS04725at 983.130 kb on + strand, within A4249_RS04725at 983.131 kb on - strand, within A4249_RS04725at 983.131 kb on - strand, within A4249_RS04725at 983.481 kb on + strandat 983.481 kb on + strandat 983.481 kb on + strandat 983.482 kb on - strandat 983.482 kb on - strandat 983.482 kb on - strandat 983.496 kb on - strandat 983.496 kb on - strandat 983.867 kb on + strand, within A4249_RS04730at 983.867 kb on + strand, within A4249_RS04730at 984.017 kb on + strand, within A4249_RS04730at 984.017 kb on + strand, within A4249_RS04730at 984.017 kb on + strand, within A4249_RS04730at 984.017 kb on + strand, within A4249_RS04730at 984.017 kb on + strand, within A4249_RS04730at 984.018 kb on - strand, within A4249_RS04730at 984.018 kb on - strand, within A4249_RS04730at 984.018 kb on - strand, within A4249_RS04730at 984.018 kb on - strand, within A4249_RS04730at 984.018 kb on - strand, within A4249_RS04730at 984.018 kb on - strand, within A4249_RS04730at 984.020 kb on + strand, within A4249_RS04730at 984.033 kb on + strand, within A4249_RS04730at 984.059 kb on + strand, within A4249_RS04730at 984.059 kb on + strand, within A4249_RS04730at 984.059 kb on + strand, within A4249_RS04730at 984.059 kb on + strand, within A4249_RS04730at 984.060 kb on - strand, within A4249_RS04730at 984.060 kb on - strand, within A4249_RS04730at 984.060 kb on - strand, within A4249_RS04730at 984.060 kb on - strand, within A4249_RS04730at 984.060 kb on - strand, within A4249_RS04730at 984.180 kb on + strand, within A4249_RS04730at 984.180 kb on + strand, within A4249_RS04730at 984.180 kb on + strand, within A4249_RS04730at 984.180 kb on + strand, within A4249_RS04730at 984.181 kb on - strand, within A4249_RS04730at 984.181 kb on - strand, within A4249_RS04730at 984.181 kb on - strand, within A4249_RS04730at 984.181 kb on - strand, within A4249_RS04730at 984.181 kb on - strand, within A4249_RS04730at 984.181 kb on - strand, within A4249_RS04730at 984.181 kb on - strand, within A4249_RS04730at 984.255 kb on + strand, within A4249_RS04730at 984.256 kb on - strand, within A4249_RS04730at 984.256 kb on - strand, within A4249_RS04730at 984.272 kb on + strand, within A4249_RS04730at 984.272 kb on + strand, within A4249_RS04730at 984.272 kb on + strand, within A4249_RS04730at 984.272 kb on + strand, within A4249_RS04730at 984.272 kb on + strand, within A4249_RS04730at 984.272 kb on + strand, within A4249_RS04730at 984.272 kb on + strand, within A4249_RS04730at 984.273 kb on - strand, within A4249_RS04730at 984.273 kb on - strand, within A4249_RS04730at 984.303 kb on - strand, within A4249_RS04730at 984.303 kb on - strand, within A4249_RS04730at 984.494 kb on + strand, within A4249_RS04730at 984.495 kb on - strand, within A4249_RS04730at 984.495 kb on - strand, within A4249_RS04730at 984.590 kb on + strand, within A4249_RS04730at 984.590 kb on + strand, within A4249_RS04730at 984.591 kb on - strand, within A4249_RS04730at 984.591 kb on - strand, within A4249_RS04730at 984.591 kb on - strand, within A4249_RS04730at 984.762 kb on + strandat 984.762 kb on + strandat 984.762 kb on + strandat 984.762 kb on + strandat 984.763 kb on - strandat 984.863 kb on + strandat 984.863 kb on + strandat 984.863 kb on + strandat 984.863 kb on + strandat 984.863 kb on + strandat 984.864 kb on - strandat 984.864 kb on - strandat 984.873 kb on + strandat 984.873 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.882 kb on + strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.883 kb on - strandat 984.884 kb on + strandat 984.884 kb on + strandat 984.884 kb on + strandat 984.884 kb on + strandat 984.884 kb on + strandat 984.884 kb on + strandat 984.884 kb on + strandat 984.885 kb on - strandat 985.005 kb on - strandat 985.247 kb on + strand, within A4249_RS04740at 985.248 kb on - strand, within A4249_RS04740at 985.268 kb on + strand, within A4249_RS04740at 985.268 kb on + strand, within A4249_RS04740at 985.268 kb on + strand, within A4249_RS04740at 985.269 kb on - strand, within A4249_RS04740at 985.269 kb on - strand, within A4249_RS04740at 985.292 kb on + strand, within A4249_RS04740at 985.293 kb on - strand, within A4249_RS04740at 985.293 kb on - strand, within A4249_RS04740at 985.293 kb on - strand, within A4249_RS04740at 985.293 kb on - strand, within A4249_RS04740at 985.319 kb on + strand, within A4249_RS04740at 985.608 kb on + strand, within A4249_RS04740at 985.609 kb on - strand, within A4249_RS04740at 985.707 kb on + strand, within A4249_RS04740

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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982,630 - A4249_RS04725 0.24 +0.8
982,897 + A4249_RS04725 0.48 +0.1
982,897 + A4249_RS04725 0.48 -0.5
982,897 + A4249_RS04725 0.48 -1.8
982,897 + A4249_RS04725 0.48 -0.4
982,897 + A4249_RS04725 0.48 +0.4
982,897 + A4249_RS04725 0.48 +1.0
982,897 + A4249_RS04725 0.48 -1.0
982,897 + A4249_RS04725 0.48 +0.1
982,897 + A4249_RS04725 0.48 +0.1
982,898 - A4249_RS04725 0.48 -0.3
982,898 - A4249_RS04725 0.48 -0.6
982,898 - A4249_RS04725 0.48 -0.3
982,898 - A4249_RS04725 0.48 +0.2
982,898 - A4249_RS04725 0.48 +0.6
982,961 + A4249_RS04725 0.53 +0.5
982,961 + A4249_RS04725 0.53 +0.3
982,961 + A4249_RS04725 0.53 -0.2
982,962 - A4249_RS04725 0.53 +0.2
982,962 - A4249_RS04725 0.53 -1.4
983,130 + A4249_RS04725 0.68 -1.6
983,130 + A4249_RS04725 0.68 +0.5
983,131 - A4249_RS04725 0.68 +0.6
983,131 - A4249_RS04725 0.68 -2.2
983,481 + -0.3
983,481 + +0.2
983,481 + -0.3
983,482 - +0.6
983,482 - -0.2
983,482 - +1.0
983,496 - -0.1
983,496 - -0.1
983,867 + A4249_RS04730 0.28 +0.9
983,867 + A4249_RS04730 0.28 +0.1
984,017 + A4249_RS04730 0.40 +0.5
984,017 + A4249_RS04730 0.40 -2.1
984,017 + A4249_RS04730 0.40 +0.2
984,017 + A4249_RS04730 0.40 -0.5
984,017 + A4249_RS04730 0.40 -0.0
984,018 - A4249_RS04730 0.40 -0.2
984,018 - A4249_RS04730 0.40 +0.3
984,018 - A4249_RS04730 0.40 +0.0
984,018 - A4249_RS04730 0.40 +0.2
984,018 - A4249_RS04730 0.40 -0.3
984,018 - A4249_RS04730 0.40 +0.0
984,020 + A4249_RS04730 0.40 -1.8
984,033 + A4249_RS04730 0.41 +0.3
984,059 + A4249_RS04730 0.43 +0.1
984,059 + A4249_RS04730 0.43 -0.3
984,059 + A4249_RS04730 0.43 -0.7
984,059 + A4249_RS04730 0.43 -0.1
984,060 - A4249_RS04730 0.43 -2.1
984,060 - A4249_RS04730 0.43 +1.5
984,060 - A4249_RS04730 0.43 -0.9
984,060 - A4249_RS04730 0.43 -0.0
984,060 - A4249_RS04730 0.43 +1.0
984,180 + A4249_RS04730 0.52 +0.1
984,180 + A4249_RS04730 0.52 -0.5
984,180 + A4249_RS04730 0.52 +1.0
984,180 + A4249_RS04730 0.52 -0.0
984,181 - A4249_RS04730 0.52 -0.0
984,181 - A4249_RS04730 0.52 +2.2
984,181 - A4249_RS04730 0.52 -0.0
984,181 - A4249_RS04730 0.52 -1.9
984,181 - A4249_RS04730 0.52 +1.3
984,181 - A4249_RS04730 0.52 +0.6
984,181 - A4249_RS04730 0.52 -0.8
984,255 + A4249_RS04730 0.58 -0.4
984,256 - A4249_RS04730 0.58 -0.8
984,256 - A4249_RS04730 0.58 -0.0
984,272 + A4249_RS04730 0.59 -0.2
984,272 + A4249_RS04730 0.59 +0.1
984,272 + A4249_RS04730 0.59 -0.5
984,272 + A4249_RS04730 0.59 +0.1
984,272 + A4249_RS04730 0.59 +0.7
984,272 + A4249_RS04730 0.59 -0.1
984,272 + A4249_RS04730 0.59 +0.5
984,273 - A4249_RS04730 0.59 -0.6
984,273 - A4249_RS04730 0.59 +0.1
984,303 - A4249_RS04730 0.61 -0.4
984,303 - A4249_RS04730 0.61 -0.2
984,494 + A4249_RS04730 0.76 -2.3
984,495 - A4249_RS04730 0.76 -0.7
984,495 - A4249_RS04730 0.76 -0.9
984,590 + A4249_RS04730 0.83 -0.6
984,590 + A4249_RS04730 0.83 -1.2
984,591 - A4249_RS04730 0.83 -0.0
984,591 - A4249_RS04730 0.83 -0.2
984,591 - A4249_RS04730 0.83 -1.1
984,762 + -0.4
984,762 + +1.4
984,762 + -0.0
984,762 + +1.1
984,763 - -1.7
984,863 + -0.4
984,863 + +1.1
984,863 + +0.2
984,863 + +0.8
984,863 + +0.3
984,864 - -0.3
984,864 - -0.3
984,873 + -2.2
984,873 + -0.4
984,882 + +0.5
984,882 + -0.8
984,882 + -0.0
984,882 + +0.1
984,882 + -0.6
984,882 + -0.8
984,882 + -0.7
984,882 + -0.7
984,882 + +0.6
984,882 + -0.0
984,883 - +0.4
984,883 - -0.1
984,883 - -0.8
984,883 - +0.6
984,883 - -0.6
984,883 - +0.2
984,883 - +0.8
984,883 - +0.1
984,883 - -1.8
984,883 - -1.0
984,884 + +1.3
984,884 + +0.8
984,884 + +0.7
984,884 + -0.5
984,884 + +0.4
984,884 + +0.1
984,884 + +0.0
984,885 - -0.3
985,005 - +0.2
985,247 + A4249_RS04740 0.20 -0.2
985,248 - A4249_RS04740 0.20 +0.8
985,268 + A4249_RS04740 0.22 +0.6
985,268 + A4249_RS04740 0.22 -0.1
985,268 + A4249_RS04740 0.22 -0.9
985,269 - A4249_RS04740 0.22 +0.2
985,269 - A4249_RS04740 0.22 +0.7
985,292 + A4249_RS04740 0.25 -0.1
985,293 - A4249_RS04740 0.25 +0.7
985,293 - A4249_RS04740 0.25 -0.4
985,293 - A4249_RS04740 0.25 +0.2
985,293 - A4249_RS04740 0.25 -0.1
985,319 + A4249_RS04740 0.28 +1.0
985,608 + A4249_RS04740 0.63 +0.3
985,609 - A4249_RS04740 0.63 -0.1
985,707 + A4249_RS04740 0.74 +0.8

Or see this region's nucleotide sequence