Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03660 and A4249_RS03665 are separated by 62 nucleotides A4249_RS03665 and A4249_RS03670 overlap by 8 nucleotides A4249_RS03670 and A4249_RS03675 are separated by 7 nucleotides A4249_RS03675 and A4249_RS03680 are separated by 175 nucleotides A4249_RS03680 and A4249_RS03685 are separated by 24 nucleotides
A4249_RS03660: A4249_RS03660 - PAS domain-containing sensor histidine kinase, at 774,679 to 775,686
_RS03660
A4249_RS03665: A4249_RS03665 - ArsC family reductase, at 775,749 to 776,096
_RS03665
A4249_RS03670: A4249_RS03670 - endonuclease/exonuclease/phosphatase family protein, at 776,089 to 776,898
_RS03670
A4249_RS03675: A4249_RS03675 - DUF2188 domain-containing protein, at 776,906 to 777,145
_RS03675
A4249_RS03680: A4249_RS03680 - DUF6249 domain-containing protein, at 777,321 to 777,719
_RS03680
A4249_RS03685: A4249_RS03685 - sigma-70 family RNA polymerase sigma factor, at 777,744 to 778,301
_RS03685
Position (kb) 776
777 Strain fitness (log2 ratio) -2
-1
0
1 at 775.332 kb on + strand, within A4249_RS03660 at 775.333 kb on - strand, within A4249_RS03660 at 775.333 kb on - strand, within A4249_RS03660 at 775.631 kb on + strand at 775.631 kb on + strand at 775.632 kb on - strand at 775.632 kb on - strand at 775.632 kb on - strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.764 kb on + strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.845 kb on + strand, within A4249_RS03665 at 775.845 kb on + strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 776.076 kb on + strand at 776.077 kb on - strand at 776.090 kb on + strand at 776.090 kb on + strand at 776.091 kb on - strand at 776.091 kb on - strand at 776.091 kb on - strand at 776.135 kb on + strand at 776.386 kb on + strand, within A4249_RS03670 at 776.387 kb on - strand, within A4249_RS03670 at 776.823 kb on + strand at 776.824 kb on - strand at 776.824 kb on - strand at 776.982 kb on + strand, within A4249_RS03675 at 776.983 kb on - strand, within A4249_RS03675 at 777.078 kb on + strand, within A4249_RS03675 at 777.078 kb on + strand, within A4249_RS03675 at 777.078 kb on + strand, within A4249_RS03675 at 777.079 kb on - strand, within A4249_RS03675 at 777.079 kb on - strand, within A4249_RS03675 at 777.079 kb on - strand, within A4249_RS03675 at 777.079 kb on - strand, within A4249_RS03675 at 777.096 kb on + strand, within A4249_RS03675 at 777.097 kb on - strand, within A4249_RS03675 at 777.097 kb on - strand, within A4249_RS03675 at 777.097 kb on - strand, within A4249_RS03675 at 777.129 kb on + strand at 777.129 kb on + strand at 777.129 kb on + strand at 777.130 kb on - strand at 777.180 kb on + strand at 777.181 kb on - strand at 777.181 kb on - strand at 777.214 kb on + strand at 777.214 kb on + strand at 777.215 kb on - strand at 777.215 kb on - strand at 777.215 kb on - strand at 777.215 kb on - strand at 777.229 kb on + strand at 777.230 kb on - strand at 777.313 kb on + strand at 777.314 kb on - strand at 777.314 kb on - strand at 777.371 kb on + strand, within A4249_RS03680 at 777.371 kb on + strand, within A4249_RS03680 at 777.372 kb on - strand, within A4249_RS03680 at 777.405 kb on + strand, within A4249_RS03680 at 777.405 kb on + strand, within A4249_RS03680 at 777.406 kb on - strand, within A4249_RS03680 at 777.605 kb on + strand, within A4249_RS03680 at 777.606 kb on - strand, within A4249_RS03680 at 777.606 kb on - strand, within A4249_RS03680 at 777.606 kb on - strand, within A4249_RS03680 at 777.606 kb on - strand, within A4249_RS03680 at 777.656 kb on + strand, within A4249_RS03680 at 777.657 kb on - strand, within A4249_RS03680 at 777.657 kb on - strand, within A4249_RS03680 at 777.816 kb on + strand, within A4249_RS03685 at 777.816 kb on + strand, within A4249_RS03685 at 777.816 kb on + strand, within A4249_RS03685 at 777.816 kb on + strand, within A4249_RS03685 at 777.816 kb on + strand, within A4249_RS03685 at 777.817 kb on - strand, within A4249_RS03685 at 777.817 kb on - strand, within A4249_RS03685 at 777.817 kb on - strand, within A4249_RS03685 at 777.817 kb on - strand, within A4249_RS03685
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 775,332 + A4249_RS03660 0.65 +1.2 775,333 - A4249_RS03660 0.65 +0.5 775,333 - A4249_RS03660 0.65 -0.0 775,631 + -0.2 775,631 + +0.7 775,632 - +0.8 775,632 - -0.1 775,632 - -1.0 775,755 + -0.3 775,755 + -2.4 775,755 + +0.3 775,755 + +0.5 775,755 + -0.1 775,755 + +0.0 775,755 + -0.3 775,755 + +0.9 775,755 + +0.0 775,755 + +1.3 775,755 + -0.4 775,755 + -0.1 775,755 + -0.1 775,755 + -0.2 775,755 + -0.4 775,755 + -0.1 775,756 - +0.1 775,756 - +0.6 775,756 - +0.4 775,756 - +0.3 775,756 - -0.0 775,756 - +1.2 775,756 - -0.9 775,756 - -0.3 775,756 - +0.9 775,756 - -0.3 775,756 - +1.0 775,756 - -0.1 775,764 + -0.4 775,765 - -2.0 775,765 - +0.1 775,765 - -0.2 775,765 - -0.7 775,765 - -0.3 775,830 + A4249_RS03665 0.23 +1.1 775,830 + A4249_RS03665 0.23 +0.8 775,830 + A4249_RS03665 0.23 -0.7 775,830 + A4249_RS03665 0.23 +0.4 775,830 + A4249_RS03665 0.23 +1.7 775,830 + A4249_RS03665 0.23 -0.3 775,830 + A4249_RS03665 0.23 +0.0 775,830 + A4249_RS03665 0.23 +1.0 775,830 + A4249_RS03665 0.23 -0.8 775,831 - A4249_RS03665 0.24 -0.4 775,831 - A4249_RS03665 0.24 +0.2 775,831 - A4249_RS03665 0.24 -0.1 775,831 - A4249_RS03665 0.24 +0.9 775,831 - A4249_RS03665 0.24 +0.6 775,831 - A4249_RS03665 0.24 +1.5 775,831 - A4249_RS03665 0.24 -1.3 775,831 - A4249_RS03665 0.24 -1.6 775,831 - A4249_RS03665 0.24 -0.6 775,831 - A4249_RS03665 0.24 +0.6 775,831 - A4249_RS03665 0.24 -0.0 775,831 - A4249_RS03665 0.24 +0.7 775,831 - A4249_RS03665 0.24 +0.5 775,831 - A4249_RS03665 0.24 +0.0 775,845 + A4249_RS03665 0.28 +1.0 775,845 + A4249_RS03665 0.28 -0.1 775,846 - A4249_RS03665 0.28 +0.7 775,846 - A4249_RS03665 0.28 +0.3 775,846 - A4249_RS03665 0.28 +0.1 775,846 - A4249_RS03665 0.28 +1.4 776,076 + +0.6 776,077 - +1.1 776,090 + -0.6 776,090 + +0.1 776,091 - +0.6 776,091 - -0.1 776,091 - +1.5 776,135 + -0.3 776,386 + A4249_RS03670 0.37 -0.9 776,387 - A4249_RS03670 0.37 +0.3 776,823 + +0.4 776,824 - +0.2 776,824 - +0.5 776,982 + A4249_RS03675 0.32 -0.2 776,983 - A4249_RS03675 0.32 -0.0 777,078 + A4249_RS03675 0.72 -2.6 777,078 + A4249_RS03675 0.72 -0.3 777,078 + A4249_RS03675 0.72 +1.0 777,079 - A4249_RS03675 0.72 -0.0 777,079 - A4249_RS03675 0.72 -0.9 777,079 - A4249_RS03675 0.72 +0.9 777,079 - A4249_RS03675 0.72 +0.2 777,096 + A4249_RS03675 0.79 +0.7 777,097 - A4249_RS03675 0.80 -0.1 777,097 - A4249_RS03675 0.80 +0.8 777,097 - A4249_RS03675 0.80 -1.4 777,129 + -0.6 777,129 + +1.4 777,129 + +0.5 777,130 - -0.3 777,180 + -0.8 777,181 - +0.7 777,181 - -0.2 777,214 + +0.6 777,214 + -0.2 777,215 - +1.1 777,215 - -0.9 777,215 - -0.3 777,215 - +0.4 777,229 + -0.7 777,230 - -0.2 777,313 + -0.8 777,314 - +0.2 777,314 - +1.0 777,371 + A4249_RS03680 0.13 +1.3 777,371 + A4249_RS03680 0.13 +0.2 777,372 - A4249_RS03680 0.13 +0.5 777,405 + A4249_RS03680 0.21 -0.9 777,405 + A4249_RS03680 0.21 +0.9 777,406 - A4249_RS03680 0.21 -0.6 777,605 + A4249_RS03680 0.71 -0.0 777,606 - A4249_RS03680 0.71 -0.3 777,606 - A4249_RS03680 0.71 -0.1 777,606 - A4249_RS03680 0.71 +0.2 777,606 - A4249_RS03680 0.71 +0.3 777,656 + A4249_RS03680 0.84 +0.8 777,657 - A4249_RS03680 0.84 -0.2 777,657 - A4249_RS03680 0.84 +0.7 777,816 + A4249_RS03685 0.13 -0.0 777,816 + A4249_RS03685 0.13 -0.3 777,816 + A4249_RS03685 0.13 -0.2 777,816 + A4249_RS03685 0.13 -0.6 777,816 + A4249_RS03685 0.13 -0.7 777,817 - A4249_RS03685 0.13 -0.2 777,817 - A4249_RS03685 0.13 -0.7 777,817 - A4249_RS03685 0.13 -0.2 777,817 - A4249_RS03685 0.13 +1.1
Or see this region's nucleotide sequence