Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03270

Experiment: Guanine 0.6617 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntA4249_RS03260 and A4249_RS03265 are separated by 283 nucleotidesA4249_RS03265 and A4249_RS03270 are separated by 100 nucleotidesA4249_RS03270 and A4249_RS03275 are separated by 273 nucleotides A4249_RS03260: A4249_RS03260 - acyltransferase, at 685,689 to 686,849 _RS03260 A4249_RS03265: A4249_RS03265 - metal-sensitive transcriptional regulator, at 687,133 to 687,408 _RS03265 A4249_RS03270: A4249_RS03270 - heavy metal translocating P-type ATPase, at 687,509 to 689,863 _RS03270 A4249_RS03275: A4249_RS03275 - DUF305 domain-containing protein, at 690,137 to 690,817 _RS03275 Position (kb) 687 688 689 690Strain fitness (log2 ratio) -2 -1 0 1 2at 686.641 kb on + strand, within A4249_RS03260at 686.641 kb on + strand, within A4249_RS03260at 686.641 kb on + strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260at 686.642 kb on - strand, within A4249_RS03260at 686.750 kb on - strandat 686.892 kb on + strandat 686.892 kb on + strandat 686.892 kb on + strandat 686.900 kb on + strandat 686.900 kb on + strandat 686.900 kb on + strandat 686.900 kb on + strandat 686.900 kb on + strandat 686.901 kb on - strandat 686.901 kb on - strandat 686.956 kb on + strandat 686.956 kb on + strandat 686.957 kb on - strandat 686.957 kb on - strandat 686.957 kb on - strandat 686.957 kb on - strandat 687.315 kb on - strand, within A4249_RS03265at 687.361 kb on + strand, within A4249_RS03265at 687.362 kb on - strand, within A4249_RS03265at 687.437 kb on + strandat 687.437 kb on + strandat 687.437 kb on + strandat 687.437 kb on + strandat 687.437 kb on + strandat 687.438 kb on - strandat 687.438 kb on - strandat 687.438 kb on - strandat 687.438 kb on - strandat 687.438 kb on - strandat 687.477 kb on + strandat 687.478 kb on - strandat 687.478 kb on - strandat 687.485 kb on - strandat 687.514 kb on + strandat 687.514 kb on + strandat 687.514 kb on + strandat 687.514 kb on + strandat 687.514 kb on + strandat 687.514 kb on + strandat 687.515 kb on - strandat 687.515 kb on - strandat 687.515 kb on - strandat 687.515 kb on - strandat 687.515 kb on - strandat 687.515 kb on - strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.659 kb on + strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.660 kb on - strandat 687.714 kb on - strandat 687.714 kb on - strandat 687.714 kb on - strandat 687.714 kb on - strandat 687.714 kb on - strandat 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.761 kb on + strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 687.762 kb on - strand, within A4249_RS03270at 688.133 kb on + strand, within A4249_RS03270at 688.133 kb on + strand, within A4249_RS03270at 688.133 kb on + strand, within A4249_RS03270at 688.133 kb on + strand, within A4249_RS03270at 688.134 kb on - strand, within A4249_RS03270at 688.134 kb on - strand, within A4249_RS03270at 688.134 kb on - strand, within A4249_RS03270at 688.134 kb on - strand, within A4249_RS03270at 688.134 kb on - strand, within A4249_RS03270at 688.208 kb on + strand, within A4249_RS03270at 688.208 kb on + strand, within A4249_RS03270at 688.209 kb on - strand, within A4249_RS03270at 688.209 kb on - strand, within A4249_RS03270at 688.209 kb on - strand, within A4249_RS03270at 688.209 kb on - strand, within A4249_RS03270at 688.209 kb on - strand, within A4249_RS03270at 688.754 kb on + strand, within A4249_RS03270at 688.754 kb on + strand, within A4249_RS03270at 688.755 kb on - strand, within A4249_RS03270at 688.755 kb on - strand, within A4249_RS03270at 688.755 kb on - strand, within A4249_RS03270at 689.183 kb on + strand, within A4249_RS03270at 689.183 kb on + strand, within A4249_RS03270at 689.183 kb on + strand, within A4249_RS03270at 689.184 kb on - strand, within A4249_RS03270at 689.395 kb on + strand, within A4249_RS03270at 689.395 kb on + strand, within A4249_RS03270at 689.395 kb on + strand, within A4249_RS03270at 689.395 kb on + strand, within A4249_RS03270at 689.395 kb on + strand, within A4249_RS03270at 689.396 kb on - strand, within A4249_RS03270at 689.396 kb on - strand, within A4249_RS03270at 689.396 kb on - strand, within A4249_RS03270at 689.396 kb on - strand, within A4249_RS03270at 689.430 kb on + strand, within A4249_RS03270at 689.430 kb on + strand, within A4249_RS03270at 689.431 kb on - strand, within A4249_RS03270at 689.431 kb on - strand, within A4249_RS03270at 689.714 kb on + strandat 689.714 kb on + strandat 689.715 kb on - strandat 689.754 kb on - strandat 689.772 kb on + strandat 689.772 kb on + strandat 689.772 kb on + strandat 689.772 kb on + strandat 689.772 kb on + strandat 689.772 kb on + strandat 689.773 kb on - strandat 689.773 kb on - strandat 689.773 kb on - strandat 689.776 kb on - strandat 689.918 kb on + strandat 689.919 kb on - strandat 689.919 kb on - strandat 689.968 kb on - strandat 689.971 kb on + strandat 689.971 kb on + strandat 689.971 kb on + strandat 689.971 kb on + strandat 689.971 kb on + strandat 689.972 kb on - strandat 689.972 kb on - strandat 689.972 kb on - strandat 690.005 kb on + strandat 690.005 kb on + strandat 690.005 kb on + strandat 690.006 kb on - strandat 690.006 kb on - strandat 690.006 kb on - strandat 690.136 kb on + strandat 690.137 kb on - strandat 690.137 kb on - strandat 690.137 kb on - strandat 690.573 kb on - strand, within A4249_RS03275

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
remove
686,641 + A4249_RS03260 0.82 -1.0
686,641 + A4249_RS03260 0.82 +0.3
686,641 + A4249_RS03260 0.82 -0.5
686,642 - A4249_RS03260 0.82 -0.2
686,642 - A4249_RS03260 0.82 +0.6
686,642 - A4249_RS03260 0.82 +0.8
686,642 - A4249_RS03260 0.82 +0.4
686,750 - +0.8
686,892 + +0.1
686,892 + +0.5
686,892 + +0.0
686,900 + -0.3
686,900 + -0.1
686,900 + +1.6
686,900 + +1.5
686,900 + +1.4
686,901 - -0.3
686,901 - +0.4
686,956 + -0.1
686,956 + -0.1
686,957 - +0.1
686,957 - -1.9
686,957 - -1.0
686,957 - -0.6
687,315 - A4249_RS03265 0.66 +0.4
687,361 + A4249_RS03265 0.83 +0.5
687,362 - A4249_RS03265 0.83 -0.5
687,437 + -0.2
687,437 + -0.2
687,437 + -0.4
687,437 + +1.1
687,437 + +0.0
687,438 - +0.7
687,438 - +1.0
687,438 - +0.8
687,438 - +1.0
687,438 - -2.1
687,477 + -1.2
687,478 - +0.6
687,478 - -0.0
687,485 - +0.7
687,514 + +0.4
687,514 + -0.3
687,514 + -0.2
687,514 + +0.6
687,514 + -0.2
687,514 + +1.3
687,515 - +0.8
687,515 - +0.1
687,515 - +1.2
687,515 - -0.1
687,515 - +0.6
687,515 - +0.1
687,659 + +0.8
687,659 + +0.0
687,659 + -0.9
687,659 + +0.3
687,659 + -0.6
687,659 + +0.4
687,659 + +0.1
687,659 + +0.1
687,659 + +0.7
687,659 + +0.4
687,659 + -0.6
687,659 + -0.9
687,659 + -1.1
687,659 + -0.1
687,659 + -0.3
687,659 + -2.1
687,659 + +0.2
687,659 + +1.4
687,659 + +0.2
687,659 + -0.2
687,659 + +0.4
687,659 + -0.1
687,659 + -0.3
687,659 + +0.0
687,660 - -0.0
687,660 - -0.3
687,660 - -0.5
687,660 - +0.7
687,660 - +0.4
687,660 - +0.4
687,660 - -0.4
687,660 - +0.3
687,660 - -0.6
687,660 - +0.2
687,660 - +1.1
687,660 - -1.9
687,714 - +0.3
687,714 - -0.2
687,714 - +0.2
687,714 - +0.0
687,714 - -0.9
687,761 + A4249_RS03270 0.11 +0.4
687,761 + A4249_RS03270 0.11 +0.6
687,761 + A4249_RS03270 0.11 +0.0
687,761 + A4249_RS03270 0.11 +1.1
687,761 + A4249_RS03270 0.11 -0.1
687,761 + A4249_RS03270 0.11 +0.0
687,761 + A4249_RS03270 0.11 -0.0
687,761 + A4249_RS03270 0.11 -0.4
687,761 + A4249_RS03270 0.11 +0.5
687,762 - A4249_RS03270 0.11 +0.2
687,762 - A4249_RS03270 0.11 +0.4
687,762 - A4249_RS03270 0.11 +1.1
687,762 - A4249_RS03270 0.11 +0.6
687,762 - A4249_RS03270 0.11 -0.1
687,762 - A4249_RS03270 0.11 +0.0
687,762 - A4249_RS03270 0.11 -0.9
687,762 - A4249_RS03270 0.11 -1.9
687,762 - A4249_RS03270 0.11 +0.8
687,762 - A4249_RS03270 0.11 +0.3
687,762 - A4249_RS03270 0.11 -2.5
687,762 - A4249_RS03270 0.11 -0.5
688,133 + A4249_RS03270 0.26 -0.6
688,133 + A4249_RS03270 0.26 +0.1
688,133 + A4249_RS03270 0.26 -0.3
688,133 + A4249_RS03270 0.26 -0.6
688,134 - A4249_RS03270 0.27 -0.9
688,134 - A4249_RS03270 0.27 -0.3
688,134 - A4249_RS03270 0.27 +0.1
688,134 - A4249_RS03270 0.27 +0.1
688,134 - A4249_RS03270 0.27 +0.9
688,208 + A4249_RS03270 0.30 -1.1
688,208 + A4249_RS03270 0.30 -1.3
688,209 - A4249_RS03270 0.30 +0.1
688,209 - A4249_RS03270 0.30 -0.3
688,209 - A4249_RS03270 0.30 +0.1
688,209 - A4249_RS03270 0.30 +0.0
688,209 - A4249_RS03270 0.30 +2.3
688,754 + A4249_RS03270 0.53 -0.4
688,754 + A4249_RS03270 0.53 -0.1
688,755 - A4249_RS03270 0.53 -0.4
688,755 - A4249_RS03270 0.53 -0.1
688,755 - A4249_RS03270 0.53 +0.9
689,183 + A4249_RS03270 0.71 +0.0
689,183 + A4249_RS03270 0.71 -0.1
689,183 + A4249_RS03270 0.71 +0.7
689,184 - A4249_RS03270 0.71 -0.4
689,395 + A4249_RS03270 0.80 -1.3
689,395 + A4249_RS03270 0.80 +0.4
689,395 + A4249_RS03270 0.80 +0.5
689,395 + A4249_RS03270 0.80 -0.9
689,395 + A4249_RS03270 0.80 +0.4
689,396 - A4249_RS03270 0.80 -0.0
689,396 - A4249_RS03270 0.80 -0.1
689,396 - A4249_RS03270 0.80 +0.1
689,396 - A4249_RS03270 0.80 -0.5
689,430 + A4249_RS03270 0.82 -0.1
689,430 + A4249_RS03270 0.82 +0.2
689,431 - A4249_RS03270 0.82 +1.3
689,431 - A4249_RS03270 0.82 -0.8
689,714 + -0.3
689,714 + -0.7
689,715 - +0.6
689,754 - -0.2
689,772 + -0.8
689,772 + -0.7
689,772 + -0.2
689,772 + +0.1
689,772 + -0.4
689,772 + +0.1
689,773 - -0.2
689,773 - +0.7
689,773 - +0.1
689,776 - +1.0
689,918 + -0.5
689,919 - -0.2
689,919 - -0.4
689,968 - +0.2
689,971 + -0.6
689,971 + -0.1
689,971 + -0.3
689,971 + -0.1
689,971 + -0.1
689,972 - -0.1
689,972 - -0.1
689,972 - +0.5
690,005 + +0.0
690,005 + +0.3
690,005 + -0.3
690,006 - -0.8
690,006 - +0.2
690,006 - -0.5
690,136 + -1.9
690,137 - -0.7
690,137 - -0.1
690,137 - +0.8
690,573 - A4249_RS03275 0.64 -0.3

Or see this region's nucleotide sequence