Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02735

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02730 and A4249_RS02735 are separated by 287 nucleotidesA4249_RS02735 and A4249_RS02740 are separated by 140 nucleotides A4249_RS02730: A4249_RS02730 - flagellin, at 579,412 to 580,230 _RS02730 A4249_RS02735: A4249_RS02735 - flagellin, at 580,518 to 581,261 _RS02735 A4249_RS02740: A4249_RS02740 - flagellin, at 581,402 to 582,205 _RS02740 Position (kb) 580 581 582Strain fitness (log2 ratio) -2 -1 0 1at 579.553 kb on + strand, within A4249_RS02730at 579.553 kb on + strand, within A4249_RS02730at 579.553 kb on + strand, within A4249_RS02730at 579.553 kb on + strand, within A4249_RS02730at 579.553 kb on + strand, within A4249_RS02730at 579.554 kb on - strand, within A4249_RS02730at 579.554 kb on - strand, within A4249_RS02730at 579.554 kb on - strand, within A4249_RS02730at 579.554 kb on - strand, within A4249_RS02730at 579.591 kb on + strand, within A4249_RS02730at 579.592 kb on - strand, within A4249_RS02730at 579.745 kb on + strand, within A4249_RS02730at 579.745 kb on + strand, within A4249_RS02730at 579.745 kb on + strand, within A4249_RS02730at 579.745 kb on + strand, within A4249_RS02730at 579.745 kb on + strand, within A4249_RS02730at 579.745 kb on + strand, within A4249_RS02730at 579.746 kb on - strand, within A4249_RS02730at 579.746 kb on - strand, within A4249_RS02730at 579.746 kb on - strand, within A4249_RS02730at 579.850 kb on - strand, within A4249_RS02730at 579.850 kb on - strand, within A4249_RS02730at 579.874 kb on + strand, within A4249_RS02730at 579.874 kb on + strand, within A4249_RS02730at 579.875 kb on - strand, within A4249_RS02730at 580.228 kb on + strandat 580.228 kb on + strandat 580.228 kb on + strandat 580.228 kb on + strandat 580.228 kb on + strandat 580.229 kb on - strandat 580.229 kb on - strandat 580.229 kb on - strandat 580.397 kb on + strandat 580.398 kb on - strandat 580.403 kb on + strandat 580.445 kb on + strandat 580.445 kb on + strandat 580.445 kb on + strandat 580.446 kb on - strandat 580.446 kb on - strandat 580.709 kb on + strand, within A4249_RS02735at 580.710 kb on - strand, within A4249_RS02735at 580.710 kb on - strand, within A4249_RS02735at 580.710 kb on - strand, within A4249_RS02735at 580.710 kb on - strand, within A4249_RS02735at 580.848 kb on + strand, within A4249_RS02735at 580.848 kb on + strand, within A4249_RS02735at 580.848 kb on + strand, within A4249_RS02735at 580.849 kb on - strand, within A4249_RS02735at 580.849 kb on - strand, within A4249_RS02735at 581.417 kb on - strandat 581.417 kb on - strandat 581.417 kb on - strandat 581.417 kb on - strandat 581.424 kb on - strandat 581.424 kb on - strandat 581.726 kb on + strand, within A4249_RS02740at 581.726 kb on + strand, within A4249_RS02740at 581.727 kb on - strand, within A4249_RS02740at 581.727 kb on - strand, within A4249_RS02740at 581.855 kb on + strand, within A4249_RS02740at 581.855 kb on + strand, within A4249_RS02740at 581.855 kb on + strand, within A4249_RS02740at 581.856 kb on - strand, within A4249_RS02740at 581.856 kb on - strand, within A4249_RS02740at 581.856 kb on - strand, within A4249_RS02740at 581.908 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.936 kb on + strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 581.937 kb on - strand, within A4249_RS02740at 582.183 kb on + strandat 582.204 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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579,553 + A4249_RS02730 0.17 -0.0
579,553 + A4249_RS02730 0.17 -0.5
579,553 + A4249_RS02730 0.17 -0.3
579,553 + A4249_RS02730 0.17 -0.3
579,553 + A4249_RS02730 0.17 -1.1
579,554 - A4249_RS02730 0.17 +0.3
579,554 - A4249_RS02730 0.17 -0.3
579,554 - A4249_RS02730 0.17 -0.1
579,554 - A4249_RS02730 0.17 -0.7
579,591 + A4249_RS02730 0.22 -0.0
579,592 - A4249_RS02730 0.22 -0.5
579,745 + A4249_RS02730 0.41 -0.2
579,745 + A4249_RS02730 0.41 +0.0
579,745 + A4249_RS02730 0.41 -0.8
579,745 + A4249_RS02730 0.41 -0.9
579,745 + A4249_RS02730 0.41 -1.5
579,745 + A4249_RS02730 0.41 +1.0
579,746 - A4249_RS02730 0.41 -0.4
579,746 - A4249_RS02730 0.41 -0.9
579,746 - A4249_RS02730 0.41 +1.0
579,850 - A4249_RS02730 0.53 +0.5
579,850 - A4249_RS02730 0.53 +1.1
579,874 + A4249_RS02730 0.56 +0.4
579,874 + A4249_RS02730 0.56 +0.4
579,875 - A4249_RS02730 0.57 -0.0
580,228 + +0.2
580,228 + -1.0
580,228 + +0.2
580,228 + +0.2
580,228 + +0.0
580,229 - -0.9
580,229 - +1.0
580,229 - +0.4
580,397 + -0.8
580,398 - +0.5
580,403 + +0.8
580,445 + +0.3
580,445 + +0.1
580,445 + +0.7
580,446 - -0.7
580,446 - -0.8
580,709 + A4249_RS02735 0.26 +0.5
580,710 - A4249_RS02735 0.26 +0.4
580,710 - A4249_RS02735 0.26 -0.1
580,710 - A4249_RS02735 0.26 +0.3
580,710 - A4249_RS02735 0.26 -0.1
580,848 + A4249_RS02735 0.44 -0.0
580,848 + A4249_RS02735 0.44 -0.1
580,848 + A4249_RS02735 0.44 -0.4
580,849 - A4249_RS02735 0.44 -2.0
580,849 - A4249_RS02735 0.44 -1.4
581,417 - -0.1
581,417 - -0.1
581,417 - -0.3
581,417 - +1.3
581,424 - +0.0
581,424 - +0.1
581,726 + A4249_RS02740 0.40 +0.5
581,726 + A4249_RS02740 0.40 -0.3
581,727 - A4249_RS02740 0.40 -0.7
581,727 - A4249_RS02740 0.40 +0.8
581,855 + A4249_RS02740 0.56 -1.0
581,855 + A4249_RS02740 0.56 -0.0
581,855 + A4249_RS02740 0.56 +0.7
581,856 - A4249_RS02740 0.56 -0.4
581,856 - A4249_RS02740 0.56 +0.8
581,856 - A4249_RS02740 0.56 -0.4
581,908 + A4249_RS02740 0.63 -0.5
581,936 + A4249_RS02740 0.66 -0.5
581,936 + A4249_RS02740 0.66 -2.2
581,936 + A4249_RS02740 0.66 +0.6
581,936 + A4249_RS02740 0.66 +1.2
581,936 + A4249_RS02740 0.66 -0.8
581,936 + A4249_RS02740 0.66 -0.0
581,937 - A4249_RS02740 0.67 -0.2
581,937 - A4249_RS02740 0.67 +0.3
581,937 - A4249_RS02740 0.67 +1.3
581,937 - A4249_RS02740 0.67 +0.1
581,937 - A4249_RS02740 0.67 -1.3
581,937 - A4249_RS02740 0.67 -2.1
582,183 + -0.5
582,204 - -1.1

Or see this region's nucleotide sequence