Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS00255

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS00250 and A4249_RS00255 are separated by 139 nucleotidesA4249_RS00255 and A4249_RS00260 are separated by 23 nucleotidesA4249_RS00260 and A4249_RS00265 are separated by 129 nucleotides A4249_RS00250: A4249_RS00250 - bifunctional protein-serine/threonine kinase/phosphatase, at 42,138 to 43,838 _RS00250 A4249_RS00255: A4249_RS00255 - outer membrane beta-barrel protein, at 43,978 to 44,829 _RS00255 A4249_RS00260: A4249_RS00260 - YqgE/AlgH family protein, at 44,853 to 45,422 _RS00260 A4249_RS00265: A4249_RS00265 - peroxiredoxin, at 45,552 to 46,037 _RS00265 Position (kb) 43 44 45Strain fitness (log2 ratio) -2 -1 0 1 2at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.167 kb on + strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.168 kb on - strand, within A4249_RS00250at 43.437 kb on + strand, within A4249_RS00250at 43.437 kb on + strand, within A4249_RS00250at 43.438 kb on - strand, within A4249_RS00250at 43.438 kb on - strand, within A4249_RS00250at 43.439 kb on + strand, within A4249_RS00250at 43.439 kb on + strand, within A4249_RS00250at 43.440 kb on - strand, within A4249_RS00250at 43.440 kb on - strand, within A4249_RS00250at 43.440 kb on - strand, within A4249_RS00250at 43.440 kb on - strand, within A4249_RS00250at 43.440 kb on - strand, within A4249_RS00250at 43.440 kb on - strand, within A4249_RS00250at 43.440 kb on - strand, within A4249_RS00250at 43.455 kb on + strand, within A4249_RS00250at 43.455 kb on + strand, within A4249_RS00250at 43.456 kb on - strand, within A4249_RS00250at 43.456 kb on - strand, within A4249_RS00250at 43.456 kb on - strand, within A4249_RS00250at 43.456 kb on - strand, within A4249_RS00250at 43.512 kb on + strand, within A4249_RS00250at 43.512 kb on + strand, within A4249_RS00250at 43.512 kb on + strand, within A4249_RS00250at 43.513 kb on - strand, within A4249_RS00250at 43.534 kb on - strand, within A4249_RS00250at 43.534 kb on - strand, within A4249_RS00250at 43.549 kb on + strand, within A4249_RS00250at 43.613 kb on + strand, within A4249_RS00250at 43.837 kb on - strandat 43.846 kb on + strandat 43.846 kb on + strandat 43.846 kb on + strandat 43.846 kb on + strandat 43.857 kb on + strandat 43.857 kb on + strandat 43.857 kb on + strandat 44.071 kb on + strand, within A4249_RS00255at 44.071 kb on + strand, within A4249_RS00255at 44.071 kb on + strand, within A4249_RS00255at 44.072 kb on - strand, within A4249_RS00255at 44.092 kb on + strand, within A4249_RS00255at 44.092 kb on + strand, within A4249_RS00255at 44.093 kb on - strand, within A4249_RS00255at 44.093 kb on - strand, within A4249_RS00255at 44.093 kb on - strand, within A4249_RS00255at 44.103 kb on + strand, within A4249_RS00255at 44.104 kb on - strand, within A4249_RS00255at 44.104 kb on - strand, within A4249_RS00255at 44.104 kb on - strand, within A4249_RS00255at 44.104 kb on - strand, within A4249_RS00255at 44.155 kb on + strand, within A4249_RS00255at 44.155 kb on + strand, within A4249_RS00255at 44.155 kb on + strand, within A4249_RS00255at 44.155 kb on + strand, within A4249_RS00255at 44.155 kb on + strand, within A4249_RS00255at 44.155 kb on + strand, within A4249_RS00255at 44.156 kb on - strand, within A4249_RS00255at 44.156 kb on - strand, within A4249_RS00255at 44.156 kb on - strand, within A4249_RS00255at 44.156 kb on - strand, within A4249_RS00255at 44.156 kb on - strand, within A4249_RS00255at 44.156 kb on - strand, within A4249_RS00255at 44.193 kb on + strand, within A4249_RS00255at 44.193 kb on + strand, within A4249_RS00255at 44.193 kb on + strand, within A4249_RS00255at 44.194 kb on - strand, within A4249_RS00255at 44.312 kb on - strand, within A4249_RS00255at 44.312 kb on - strand, within A4249_RS00255at 44.356 kb on + strand, within A4249_RS00255at 44.357 kb on - strand, within A4249_RS00255at 44.357 kb on - strand, within A4249_RS00255at 44.357 kb on - strand, within A4249_RS00255at 44.413 kb on + strand, within A4249_RS00255at 44.413 kb on + strand, within A4249_RS00255at 44.413 kb on + strand, within A4249_RS00255at 44.413 kb on + strand, within A4249_RS00255at 44.413 kb on + strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.414 kb on - strand, within A4249_RS00255at 44.467 kb on + strand, within A4249_RS00255at 44.467 kb on + strand, within A4249_RS00255at 44.467 kb on + strand, within A4249_RS00255at 44.468 kb on - strand, within A4249_RS00255at 44.468 kb on - strand, within A4249_RS00255at 44.491 kb on + strand, within A4249_RS00255at 44.491 kb on + strand, within A4249_RS00255at 44.491 kb on + strand, within A4249_RS00255at 44.491 kb on + strand, within A4249_RS00255at 44.492 kb on - strand, within A4249_RS00255at 44.492 kb on - strand, within A4249_RS00255at 44.492 kb on - strand, within A4249_RS00255at 44.492 kb on - strand, within A4249_RS00255at 44.492 kb on - strand, within A4249_RS00255at 44.492 kb on - strand, within A4249_RS00255at 44.492 kb on - strand, within A4249_RS00255at 44.512 kb on + strand, within A4249_RS00255at 44.571 kb on + strand, within A4249_RS00255at 44.571 kb on + strand, within A4249_RS00255at 44.620 kb on + strand, within A4249_RS00255at 44.621 kb on - strand, within A4249_RS00255at 44.621 kb on - strand, within A4249_RS00255at 44.621 kb on - strand, within A4249_RS00255at 44.621 kb on - strand, within A4249_RS00255at 44.621 kb on - strand, within A4249_RS00255at 44.621 kb on - strand, within A4249_RS00255at 44.656 kb on + strand, within A4249_RS00255at 44.656 kb on + strand, within A4249_RS00255at 44.656 kb on + strand, within A4249_RS00255at 44.656 kb on + strand, within A4249_RS00255at 44.657 kb on - strand, within A4249_RS00255at 44.657 kb on - strand, within A4249_RS00255at 44.657 kb on - strand, within A4249_RS00255at 44.662 kb on + strand, within A4249_RS00255at 44.662 kb on + strand, within A4249_RS00255at 44.662 kb on + strand, within A4249_RS00255at 44.662 kb on + strand, within A4249_RS00255at 44.663 kb on - strand, within A4249_RS00255at 44.663 kb on - strand, within A4249_RS00255at 44.663 kb on - strand, within A4249_RS00255at 44.818 kb on + strandat 44.818 kb on + strandat 44.819 kb on - strandat 44.819 kb on - strandat 44.819 kb on - strandat 45.161 kb on + strand, within A4249_RS00260at 45.162 kb on - strand, within A4249_RS00260at 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.496 kb on + strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.497 kb on - strandat 45.762 kb on - strand, within A4249_RS00265

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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43,167 + A4249_RS00250 0.60 +0.1
43,167 + A4249_RS00250 0.60 -0.3
43,167 + A4249_RS00250 0.60 +0.4
43,167 + A4249_RS00250 0.60 -0.4
43,167 + A4249_RS00250 0.60 -0.9
43,167 + A4249_RS00250 0.60 +0.1
43,167 + A4249_RS00250 0.60 -0.0
43,167 + A4249_RS00250 0.60 +0.5
43,167 + A4249_RS00250 0.60 +0.9
43,167 + A4249_RS00250 0.60 +0.3
43,167 + A4249_RS00250 0.60 +0.3
43,167 + A4249_RS00250 0.60 -0.3
43,167 + A4249_RS00250 0.60 +1.5
43,168 - A4249_RS00250 0.61 +1.1
43,168 - A4249_RS00250 0.61 +0.5
43,168 - A4249_RS00250 0.61 +0.0
43,168 - A4249_RS00250 0.61 +0.6
43,168 - A4249_RS00250 0.61 +0.3
43,168 - A4249_RS00250 0.61 -0.1
43,168 - A4249_RS00250 0.61 -0.2
43,168 - A4249_RS00250 0.61 -2.2
43,168 - A4249_RS00250 0.61 -0.6
43,168 - A4249_RS00250 0.61 +0.1
43,168 - A4249_RS00250 0.61 -0.5
43,437 + A4249_RS00250 0.76 -0.3
43,437 + A4249_RS00250 0.76 -0.9
43,438 - A4249_RS00250 0.76 -0.2
43,438 - A4249_RS00250 0.76 +0.5
43,439 + A4249_RS00250 0.76 +0.1
43,439 + A4249_RS00250 0.76 +0.9
43,440 - A4249_RS00250 0.77 +0.1
43,440 - A4249_RS00250 0.77 -2.0
43,440 - A4249_RS00250 0.77 +1.1
43,440 - A4249_RS00250 0.77 +0.0
43,440 - A4249_RS00250 0.77 +0.2
43,440 - A4249_RS00250 0.77 -0.5
43,440 - A4249_RS00250 0.77 -0.5
43,455 + A4249_RS00250 0.77 -1.2
43,455 + A4249_RS00250 0.77 +0.3
43,456 - A4249_RS00250 0.77 +0.7
43,456 - A4249_RS00250 0.77 +0.8
43,456 - A4249_RS00250 0.77 +1.7
43,456 - A4249_RS00250 0.77 +0.0
43,512 + A4249_RS00250 0.81 +0.6
43,512 + A4249_RS00250 0.81 +0.9
43,512 + A4249_RS00250 0.81 +0.5
43,513 - A4249_RS00250 0.81 +0.5
43,534 - A4249_RS00250 0.82 +0.6
43,534 - A4249_RS00250 0.82 -0.3
43,549 + A4249_RS00250 0.83 +0.2
43,613 + A4249_RS00250 0.87 +0.2
43,837 - -0.1
43,846 + +0.2
43,846 + -0.7
43,846 + -2.2
43,846 + +0.0
43,857 + +0.2
43,857 + -0.3
43,857 + +0.1
44,071 + A4249_RS00255 0.11 +0.2
44,071 + A4249_RS00255 0.11 +0.0
44,071 + A4249_RS00255 0.11 -0.1
44,072 - A4249_RS00255 0.11 -0.6
44,092 + A4249_RS00255 0.13 +0.6
44,092 + A4249_RS00255 0.13 -0.4
44,093 - A4249_RS00255 0.13 +0.4
44,093 - A4249_RS00255 0.13 -1.4
44,093 - A4249_RS00255 0.13 +0.3
44,103 + A4249_RS00255 0.15 -1.6
44,104 - A4249_RS00255 0.15 -0.5
44,104 - A4249_RS00255 0.15 +0.0
44,104 - A4249_RS00255 0.15 +0.1
44,104 - A4249_RS00255 0.15 +0.8
44,155 + A4249_RS00255 0.21 +0.8
44,155 + A4249_RS00255 0.21 -0.6
44,155 + A4249_RS00255 0.21 -0.3
44,155 + A4249_RS00255 0.21 +0.1
44,155 + A4249_RS00255 0.21 -0.4
44,155 + A4249_RS00255 0.21 +0.3
44,156 - A4249_RS00255 0.21 -0.9
44,156 - A4249_RS00255 0.21 +0.1
44,156 - A4249_RS00255 0.21 +0.6
44,156 - A4249_RS00255 0.21 +0.4
44,156 - A4249_RS00255 0.21 +0.4
44,156 - A4249_RS00255 0.21 +0.5
44,193 + A4249_RS00255 0.25 +1.2
44,193 + A4249_RS00255 0.25 -1.0
44,193 + A4249_RS00255 0.25 +1.6
44,194 - A4249_RS00255 0.25 +0.0
44,312 - A4249_RS00255 0.39 +0.5
44,312 - A4249_RS00255 0.39 +0.4
44,356 + A4249_RS00255 0.44 +0.3
44,357 - A4249_RS00255 0.44 +0.6
44,357 - A4249_RS00255 0.44 -0.7
44,357 - A4249_RS00255 0.44 -1.2
44,413 + A4249_RS00255 0.51 +0.0
44,413 + A4249_RS00255 0.51 -0.5
44,413 + A4249_RS00255 0.51 -0.7
44,413 + A4249_RS00255 0.51 -0.2
44,413 + A4249_RS00255 0.51 +0.7
44,414 - A4249_RS00255 0.51 +0.4
44,414 - A4249_RS00255 0.51 -0.1
44,414 - A4249_RS00255 0.51 +1.7
44,414 - A4249_RS00255 0.51 -0.2
44,414 - A4249_RS00255 0.51 +0.6
44,414 - A4249_RS00255 0.51 -0.7
44,414 - A4249_RS00255 0.51 +1.6
44,414 - A4249_RS00255 0.51 +0.5
44,467 + A4249_RS00255 0.57 -2.0
44,467 + A4249_RS00255 0.57 +0.7
44,467 + A4249_RS00255 0.57 -1.0
44,468 - A4249_RS00255 0.58 +0.5
44,468 - A4249_RS00255 0.58 +0.7
44,491 + A4249_RS00255 0.60 -0.3
44,491 + A4249_RS00255 0.60 +2.1
44,491 + A4249_RS00255 0.60 -0.5
44,491 + A4249_RS00255 0.60 -1.5
44,492 - A4249_RS00255 0.60 +0.5
44,492 - A4249_RS00255 0.60 -0.1
44,492 - A4249_RS00255 0.60 +0.3
44,492 - A4249_RS00255 0.60 +0.2
44,492 - A4249_RS00255 0.60 -0.1
44,492 - A4249_RS00255 0.60 -0.7
44,492 - A4249_RS00255 0.60 +0.7
44,512 + A4249_RS00255 0.63 -0.0
44,571 + A4249_RS00255 0.70 +0.7
44,571 + A4249_RS00255 0.70 +0.3
44,620 + A4249_RS00255 0.75 -0.5
44,621 - A4249_RS00255 0.75 -0.1
44,621 - A4249_RS00255 0.75 +0.2
44,621 - A4249_RS00255 0.75 -0.7
44,621 - A4249_RS00255 0.75 +0.6
44,621 - A4249_RS00255 0.75 +1.0
44,621 - A4249_RS00255 0.75 +0.3
44,656 + A4249_RS00255 0.80 -0.1
44,656 + A4249_RS00255 0.80 +0.9
44,656 + A4249_RS00255 0.80 +0.0
44,656 + A4249_RS00255 0.80 -0.4
44,657 - A4249_RS00255 0.80 -0.8
44,657 - A4249_RS00255 0.80 -0.4
44,657 - A4249_RS00255 0.80 +0.0
44,662 + A4249_RS00255 0.80 -0.3
44,662 + A4249_RS00255 0.80 -0.0
44,662 + A4249_RS00255 0.80 -0.7
44,662 + A4249_RS00255 0.80 +0.8
44,663 - A4249_RS00255 0.80 +0.2
44,663 - A4249_RS00255 0.80 +1.9
44,663 - A4249_RS00255 0.80 +0.1
44,818 + +0.3
44,818 + -0.2
44,819 - -0.1
44,819 - +0.2
44,819 - +0.7
45,161 + A4249_RS00260 0.54 -0.3
45,162 - A4249_RS00260 0.54 -0.6
45,496 + +0.2
45,496 + +0.6
45,496 + -0.6
45,496 + +0.3
45,496 + -1.2
45,496 + +0.9
45,496 + +1.2
45,496 + +0.0
45,496 + -0.5
45,496 + +0.7
45,496 + +0.4
45,496 + +0.1
45,496 + -1.0
45,496 + -0.2
45,496 + -1.7
45,496 + -0.4
45,496 + -1.0
45,496 + -1.1
45,497 - -0.2
45,497 - +0.3
45,497 - +0.5
45,497 - +0.6
45,497 - -0.4
45,497 - +0.2
45,497 - +0.1
45,497 - +0.1
45,497 - -1.3
45,497 - -0.7
45,497 - -0.3
45,497 - -0.1
45,497 - -0.4
45,497 - +2.6
45,497 - +0.5
45,497 - +0.3
45,762 - A4249_RS00265 0.43 -0.6

Or see this region's nucleotide sequence