Strain Fitness in Escherichia coli ECRC102 around NIAGMN_14065

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,801,089	+	gadE	NIAGMN_14060	0.73	+0.6
2,801,089	+	gadE	NIAGMN_14060	0.73	+0.1
2,801,093	+	gadE	NIAGMN_14060	0.74	+1.3
2,801,094	-	gadE	NIAGMN_14060	0.74	+1.0
2,801,284	-				+0.4
2,801,310	+				+0.4
2,801,312	+				+2.2
2,801,348	+				+1.3
2,801,348	+				+1.3
2,801,349	-				+0.8
2,801,349	-				+2.3
2,801,349	-				+0.3
2,801,351	+				+0.8
2,801,351	+				+1.6
2,801,351	+				+1.6
2,801,352	-				-0.3
2,801,352	-				+0.8
2,801,352	-				+0.8
2,801,358	-				+2.0
2,801,360	+				+1.7
2,801,366	+				+1.3
2,801,403	-				+0.8
2,801,403	-				+1.0
2,801,405	-				+1.0
2,801,405	-				+2.6
2,801,405	-				+1.2
2,801,418	-				+1.0
2,801,489	+				-1.4
2,801,490	-				-1.4
2,801,490	-				-0.7
2,801,526	-				+0.1
2,801,544	+				-0.1
2,801,581	+				-0.4
2,801,581	+				+0.6
2,801,634	+				-0.5
2,801,664	-				-1.2
2,801,665	+				-0.4
2,801,667	+				-3.6
2,801,668	-				+0.1
2,801,668	-				+2.2
2,801,686	+				+1.6
2,801,686	+				-0.2
2,801,691	-				-0.1
2,801,691	-				-0.2
2,801,691	-				+0.2
2,801,699	+				-0.0
2,801,699	+				-0.8
2,801,700	-				+0.5
2,801,700	-				-0.8
2,801,700	-				-0.7
2,801,734	+				+1.0
2,801,743	-				+0.8
2,801,809	-				+2.2
2,801,809	-				-0.8
2,801,828	-				+0.7
2,801,840	-				-0.2
2,801,922	+				+0.6
2,801,923	-				+0.9
2,801,933	+				+0.1
2,801,934	-				-0.9
2,802,005	-				+1.1
2,802,031	+				+1.2
2,802,031	+				-0.7
2,802,032	-				-2.0
2,802,032	-				+1.2
2,802,032	-				+0.6
2,802,032	-				-0.9
2,802,042	-				-1.2
2,802,085	-				-0.2
2,802,085	-				+1.4
2,802,120	+	hdeD	NIAGMN_14065	0.16	-0.5
2,802,121	-	hdeD	NIAGMN_14065	0.16	+0.6
2,802,151	-	hdeD	NIAGMN_14065	0.21	+0.4
2,802,151	-	hdeD	NIAGMN_14065	0.21	+0.1
2,802,272	+	hdeD	NIAGMN_14065	0.42	-1.1
2,802,322	+	hdeD	NIAGMN_14065	0.51	-1.2
2,802,323	-	hdeD	NIAGMN_14065	0.51	+0.2
2,802,366	+	hdeD	NIAGMN_14065	0.59	+0.2
2,802,399	+	hdeD	NIAGMN_14065	0.64	-0.3
2,802,400	-	hdeD	NIAGMN_14065	0.65	+0.5
2,802,432	+	hdeD	NIAGMN_14065	0.70	+0.2
2,802,435	+	hdeD	NIAGMN_14065	0.71	+0.7
2,802,436	-	hdeD	NIAGMN_14065	0.71	+0.4
2,802,436	-	hdeD	NIAGMN_14065	0.71	-1.1
2,802,444	+	hdeD	NIAGMN_14065	0.72	-0.1
2,802,445	-	hdeD	NIAGMN_14065	0.72	+0.9
2,802,445	-	hdeD	NIAGMN_14065	0.72	+0.8
2,802,447	+	hdeD	NIAGMN_14065	0.73	-0.2
2,802,448	-	hdeD	NIAGMN_14065	0.73	+0.0
2,802,456	+	hdeD	NIAGMN_14065	0.74	-0.4
2,802,489	-	hdeD	NIAGMN_14065	0.80	-0.8
2,802,587	+				+1.9
2,802,588	-				+0.3
2,802,591	+				-0.2
2,802,591	+				-1.0
2,802,592	-				-0.6
2,802,592	-				-0.7
2,802,592	-				-0.2
2,802,592	-				+0.2
2,802,593	+				-0.3
2,802,593	+				+1.1
2,802,593	+				-1.2
2,802,594	-				-0.4
2,802,595	+				+0.5
2,802,595	+				+0.3
2,802,595	+				+0.9
2,802,595	+				+0.3
2,802,595	+				+0.7
2,802,595	+				-0.2
2,802,596	-				-0.2
2,802,596	-				+0.0
2,802,596	-				-0.0
2,802,596	-				+0.8
2,802,597	+				+0.1
2,802,597	+				+0.7
2,802,598	-				+2.2
2,802,598	-				-1.1
2,802,598	-				+0.4
2,802,603	-				+0.7
2,802,603	-				+0.0
2,802,603	-				-0.9
2,802,603	-				-1.1
2,802,603	-				+0.3
2,802,603	-				+0.1
2,802,603	-				-0.3
2,802,603	-				+0.2
2,802,621	+				-0.8
2,802,640	+				+0.3
2,802,777	+				-0.2
2,802,777	+				+0.2
2,802,778	-				+0.9
2,802,794	+				-0.5
2,802,796	+				+0.2
2,802,838	+				-0.7
2,802,840	+				+0.1
2,802,840	+				-0.3
2,802,841	-				+1.1
2,802,853	+				+0.5
2,802,854	-				+0.1
2,803,068	+	hdeA	NIAGMN_14070	0.63	-0.5
2,803,069	-	hdeA	NIAGMN_14070	0.64	+1.2
2,803,148	-	hdeA	NIAGMN_14070	0.87	+0.6
2,803,148	-	hdeA	NIAGMN_14070	0.87	+0.2
2,803,183	+				+0.4
2,803,183	+				+0.7
2,803,240	+				+1.1
2,803,274	+				+0.1
2,803,276	+				+0.6
2,803,286	-				+0.7
2,803,412	+	hdeB	NIAGMN_14075	0.35	-0.1
2,803,492	+	hdeB	NIAGMN_14075	0.59	-0.2
2,803,493	-	hdeB	NIAGMN_14075	0.59	-1.0
2,803,494	+	hdeB	NIAGMN_14075	0.59	-1.6
2,803,494	+	hdeB	NIAGMN_14075	0.59	-0.8
2,803,497	-	hdeB	NIAGMN_14075	0.60	-1.1
2,803,515	-	hdeB	NIAGMN_14075	0.65	-1.2
2,803,561	-	hdeB	NIAGMN_14075	0.79	+0.1