Strain Fitness in Escherichia coli ECRC102 around NIAGMN_10505

Experiment: Sodium-DL-Lactate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sodium-DL-Lactate
2,064,038	+	phnG	NIAGMN_10495	0.23	-0.4
2,064,038	+	phnG	NIAGMN_10495	0.23	-0.1
2,064,038	+	phnG	NIAGMN_10495	0.23	-0.0
2,064,038	+	phnG	NIAGMN_10495	0.23	+0.5
2,064,039	-	phnG	NIAGMN_10495	0.23	-0.4
2,064,039	-	phnG	NIAGMN_10495	0.23	+0.2
2,064,039	-	phnG	NIAGMN_10495	0.23	+0.9
2,064,039	-	phnG	NIAGMN_10495	0.23	-0.3
2,064,147	+	phnG	NIAGMN_10495	0.47	-0.8
2,064,147	+	phnG	NIAGMN_10495	0.47	-1.3
2,064,147	+	phnG	NIAGMN_10495	0.47	-1.7
2,064,264	+	phnG	NIAGMN_10495	0.73	-0.2
2,064,277	+	phnG	NIAGMN_10495	0.76	-0.4
2,064,277	+	phnG	NIAGMN_10495	0.76	+0.1
2,064,302	-	phnG	NIAGMN_10495	0.81	+1.9
2,064,359	-				-0.3
2,064,402	+				-0.7
2,064,402	+				+0.9
2,064,403	-				+0.4
2,064,403	-				+0.7
2,064,403	-				-0.9
2,064,446	+	phnH	NIAGMN_10500	0.11	+0.3
2,064,446	+	phnH	NIAGMN_10500	0.11	-1.5
2,064,969	+				+0.3
2,064,969	+				+0.2
2,064,969	+				+0.6
2,064,969	+				-0.0
2,064,969	+				+0.6
2,064,969	+				+0.2
2,064,969	+				-0.6
2,064,970	-				-0.5
2,064,970	-				-0.3
2,064,970	-				+0.4
2,064,970	-				-0.1
2,064,970	-				+2.7
2,064,970	-				+0.8
2,064,970	-				+0.2
2,064,970	-				-2.0
2,065,089	-	phnI	NIAGMN_10505	0.12	-0.7
2,065,089	-	phnI	NIAGMN_10505	0.12	-0.5
2,065,089	-	phnI	NIAGMN_10505	0.12	+0.0
2,065,277	+	phnI	NIAGMN_10505	0.29	-0.4
2,065,278	-	phnI	NIAGMN_10505	0.29	+0.1
2,065,293	-	phnI	NIAGMN_10505	0.31	-0.2
2,065,293	-	phnI	NIAGMN_10505	0.31	+0.8
2,065,298	+	phnI	NIAGMN_10505	0.31	-0.7
2,065,298	+	phnI	NIAGMN_10505	0.31	+0.2
2,065,330	-	phnI	NIAGMN_10505	0.34	-0.6
2,065,330	-	phnI	NIAGMN_10505	0.34	-0.3
2,065,335	+	phnI	NIAGMN_10505	0.35	-1.0
2,065,335	+	phnI	NIAGMN_10505	0.35	+0.2
2,065,335	+	phnI	NIAGMN_10505	0.35	-1.1
2,065,336	-	phnI	NIAGMN_10505	0.35	-0.5
2,065,519	-	phnI	NIAGMN_10505	0.52	+0.7
2,065,573	-	phnI	NIAGMN_10505	0.57	-0.2
2,065,573	-	phnI	NIAGMN_10505	0.57	+0.8
2,065,651	-	phnI	NIAGMN_10505	0.64	+0.0
2,065,965	+				-0.1
2,065,966	-				+0.2
2,065,966	-				-0.2
2,065,966	-				+0.7
2,065,993	+				+0.4
2,065,994	-				+0.1
2,066,028	+				-0.1
2,066,042	-				+0.1
2,066,054	-				+1.0
2,066,187	+	phnJ	NIAGMN_10510	0.19	-1.0
2,066,281	-	phnJ	NIAGMN_10510	0.30	+2.0
2,066,385	+	phnJ	NIAGMN_10510	0.43	+0.5
2,066,386	-	phnJ	NIAGMN_10510	0.43	+0.3
2,066,470	+	phnJ	NIAGMN_10510	0.53	+0.7
2,066,470	+	phnJ	NIAGMN_10510	0.53	+1.8
2,066,471	-	phnJ	NIAGMN_10510	0.53	-0.1
2,066,494	+	phnJ	NIAGMN_10510	0.56	-0.2
2,066,495	-	phnJ	NIAGMN_10510	0.56	-1.0
2,066,533	+	phnJ	NIAGMN_10510	0.60	+0.1
2,066,533	+	phnJ	NIAGMN_10510	0.60	-0.2
2,066,533	+	phnJ	NIAGMN_10510	0.60	-0.9
2,066,533	+	phnJ	NIAGMN_10510	0.60	+0.7
2,066,533	+	phnJ	NIAGMN_10510	0.60	+1.1
2,066,533	+	phnJ	NIAGMN_10510	0.60	+2.1
2,066,533	+	phnJ	NIAGMN_10510	0.60	-2.5
2,066,533	+	phnJ	NIAGMN_10510	0.60	-0.4
2,066,534	-	phnJ	NIAGMN_10510	0.60	-0.5
2,066,534	-	phnJ	NIAGMN_10510	0.60	+1.0
2,066,534	-	phnJ	NIAGMN_10510	0.60	-0.3
2,066,534	-	phnJ	NIAGMN_10510	0.60	-1.0
2,066,534	-	phnJ	NIAGMN_10510	0.60	+0.1
2,066,534	-	phnJ	NIAGMN_10510	0.60	-0.0
2,066,567	+	phnJ	NIAGMN_10510	0.64	-0.2
2,066,567	+	phnJ	NIAGMN_10510	0.64	+3.0
2,066,568	-	phnJ	NIAGMN_10510	0.64	-0.3
2,066,568	-	phnJ	NIAGMN_10510	0.64	+1.4
2,066,568	-	phnJ	NIAGMN_10510	0.64	-0.4
2,066,662	+	phnJ	NIAGMN_10510	0.76	+0.3
2,066,662	+	phnJ	NIAGMN_10510	0.76	-0.2
2,066,663	-	phnJ	NIAGMN_10510	0.76	-0.7
2,066,663	-	phnJ	NIAGMN_10510	0.76	-0.3
2,066,770	+	phnJ	NIAGMN_10510	0.88	-0.9
2,066,770	+	phnJ	NIAGMN_10510	0.88	-1.5
2,066,770	+	phnJ	NIAGMN_10510	0.88	+0.5
2,066,834	-				-0.6
2,066,879	-				-0.0
2,066,891	+				-0.1
2,066,892	-				+0.7
2,066,892	-				-1.7
2,066,928	-				+1.9
2,066,947	+	phnK	NIAGMN_10515	0.11	+0.2
2,066,947	+	phnK	NIAGMN_10515	0.11	-0.4
2,066,948	-	phnK	NIAGMN_10515	0.11	+1.3
2,066,948	-	phnK	NIAGMN_10515	0.11	-1.2