Strain Fitness in Escherichia coli ECRC102 around NIAGMN_03380

Experiment: Sodium-DL-Lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntNIAGMN_03375 and NIAGMN_03380 overlap by 4 nucleotidesNIAGMN_03380 and NIAGMN_03385 overlap by 4 nucleotides NIAGMN_03375: NIAGMN_03375 - phospholipase, at 603,073 to 604,143 _03375 NIAGMN_03380: NIAGMN_03380 - chemotaxis protein, at 604,140 to 605,045 _03380 NIAGMN_03385: NIAGMN_03385 - dGTPase, at 605,042 to 607,426 _03385 Position (kb) 604 605 606Strain fitness (log2 ratio) -1 0 1at 605.317 kb on + strand, within NIAGMN_03385at 605.917 kb on - strand, within NIAGMN_03385at 605.961 kb on - strand, within NIAGMN_03385

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Per-strain Table

Position Strand Gene LocusTag Fraction Sodium-DL-Lactate
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605,317 + NIAGMN_03385 0.12 +1.0
605,917 - NIAGMN_03385 0.37 -0.3
605,961 - NIAGMN_03385 0.39 -0.1

Or see this region's nucleotide sequence