Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06985

Experiment: Planktonic; Day2; SGW; pH7

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Planktonic; Day2; SGW; pH7
1,572,515	+				-1.2
1,572,516	-				+0.5
1,572,517	+				-2.0
1,572,517	+				-0.0
1,572,524	+				-1.4
1,572,525	-				-1.7
1,572,525	-				+0.4
1,572,525	-				-0.5
1,572,536	-		LRK53_RS06975	0.11	+0.2
1,572,559	-		LRK53_RS06975	0.16	-0.7
1,572,569	-		LRK53_RS06975	0.18	-0.2
1,572,590	+		LRK53_RS06975	0.22	-2.2
1,572,591	-		LRK53_RS06975	0.22	-0.7
1,572,726	+		LRK53_RS06975	0.49	-2.0
1,572,727	-		LRK53_RS06975	0.49	+0.1
1,572,745	-		LRK53_RS06975	0.52	-1.3
1,572,780	-		LRK53_RS06975	0.59	-1.2
1,572,783	+		LRK53_RS06975	0.60	-1.5
1,572,783	+		LRK53_RS06975	0.60	+0.1
1,572,783	+		LRK53_RS06975	0.60	-2.0
1,572,784	-		LRK53_RS06975	0.60	+1.2
1,572,784	-		LRK53_RS06975	0.60	-0.3
1,572,784	-		LRK53_RS06975	0.60	-1.2
1,572,784	-		LRK53_RS06975	0.60	-1.6
1,572,784	-		LRK53_RS06975	0.60	-0.1
1,572,784	-		LRK53_RS06975	0.60	+0.3
1,572,784	-		LRK53_RS06975	0.60	+0.1
1,572,788	+		LRK53_RS06975	0.61	-1.8
1,572,789	-		LRK53_RS06975	0.61	-0.2
1,572,789	-		LRK53_RS06975	0.61	-1.8
1,572,789	-		LRK53_RS06975	0.61	-1.2
1,572,834	-		LRK53_RS06975	0.70	-2.1
1,572,855	+		LRK53_RS06975	0.74	+0.4
1,572,864	+		LRK53_RS06975	0.76	+0.1
1,572,889	+		LRK53_RS06975	0.81	-1.0
1,572,921	+		LRK53_RS06975	0.87	-2.0
1,572,922	-		LRK53_RS06975	0.87	-1.5
1,572,969	+				-0.6
1,572,975	+				-1.6
1,573,014	+				-0.7
1,573,112	+		LRK53_RS06980	0.40	-2.8
1,573,112	+		LRK53_RS06980	0.40	-1.0
1,573,114	+		LRK53_RS06980	0.40	-1.4
1,573,144	+		LRK53_RS06980	0.50	-0.8
1,573,145	-		LRK53_RS06980	0.50	+0.6
1,573,145	-		LRK53_RS06980	0.50	-0.4
1,573,145	-		LRK53_RS06980	0.50	-0.9
1,573,178	-		LRK53_RS06980	0.60	-0.2
1,573,188	-		LRK53_RS06980	0.64	-1.3
1,573,188	-		LRK53_RS06980	0.64	-1.9
1,573,189	+		LRK53_RS06980	0.64	-1.2
1,573,232	+		LRK53_RS06980	0.77	-0.2
1,573,232	+		LRK53_RS06980	0.77	-2.4
1,573,235	+		LRK53_RS06980	0.78	-0.9
1,573,236	-		LRK53_RS06980	0.79	-3.1
1,573,236	-		LRK53_RS06980	0.79	+0.5
1,573,236	-		LRK53_RS06980	0.79	+0.5
1,573,236	-		LRK53_RS06980	0.79	+0.9
1,573,250	+		LRK53_RS06980	0.83	+2.1
1,573,251	-		LRK53_RS06980	0.83	-0.9
1,573,251	-		LRK53_RS06980	0.83	-0.6
1,573,252	+		LRK53_RS06980	0.83	+2.5
1,573,253	-		LRK53_RS06980	0.84	-1.8
1,573,253	-		LRK53_RS06980	0.84	-0.2
1,573,253	-		LRK53_RS06980	0.84	-1.4
1,573,253	-		LRK53_RS06980	0.84	-1.0
1,573,253	-		LRK53_RS06980	0.84	+0.8
1,573,278	-				-0.1
1,573,311	+				-0.7
1,573,312	-				-2.5
1,573,312	-				-1.0
1,573,312	-				-0.9
1,573,316	+				-1.7
1,573,316	+				-0.3
1,573,316	+				-0.9
1,573,316	+				-0.9
1,573,317	-				-0.2
1,573,317	-				-1.2
1,573,340	-				-0.6
1,573,345	+				+0.4
1,573,358	+				-0.0
1,573,359	-				+1.3
1,573,408	+				-1.4
1,573,408	+				-0.2
1,573,408	+				-1.0
1,573,408	+				-1.0
1,573,409	-				-0.9
1,573,409	-				-0.5
1,573,409	-				+0.1
1,573,488	+				+0.9
1,573,489	-				+0.3
1,573,619	+		LRK53_RS06985	0.14	-0.4
1,573,619	+		LRK53_RS06985	0.14	-0.7
1,573,619	+		LRK53_RS06985	0.14	-0.5
1,573,631	+		LRK53_RS06985	0.15	-0.8
1,573,631	+		LRK53_RS06985	0.15	+0.7
1,573,631	+		LRK53_RS06985	0.15	-2.0
1,573,631	+		LRK53_RS06985	0.15	+1.1
1,573,631	+		LRK53_RS06985	0.15	-0.2
1,573,631	+		LRK53_RS06985	0.15	+1.4
1,573,631	+		LRK53_RS06985	0.15	-0.7
1,573,655	+		LRK53_RS06985	0.18	-1.3
1,573,655	+		LRK53_RS06985	0.18	-2.4
1,573,655	+		LRK53_RS06985	0.18	+0.7
1,573,655	+		LRK53_RS06985	0.18	-1.4
1,573,656	-		LRK53_RS06985	0.18	-1.2
1,573,798	+		LRK53_RS06985	0.33	-0.9
1,573,798	+		LRK53_RS06985	0.33	+0.8
1,573,798	+		LRK53_RS06985	0.33	-0.5
1,573,799	-		LRK53_RS06985	0.33	-0.5
1,573,799	-		LRK53_RS06985	0.33	+1.5
1,574,003	+		LRK53_RS06985	0.54	-2.0
1,574,003	+		LRK53_RS06985	0.54	-1.4
1,574,003	+		LRK53_RS06985	0.54	+1.1
1,574,003	+		LRK53_RS06985	0.54	-0.3
1,574,003	+		LRK53_RS06985	0.54	-1.2
1,574,003	+		LRK53_RS06985	0.54	-0.7
1,574,003	+		LRK53_RS06985	0.54	-0.3
1,574,004	-		LRK53_RS06985	0.54	-0.2
1,574,004	-		LRK53_RS06985	0.54	-1.0
1,574,102	+		LRK53_RS06985	0.64	-1.5
1,574,102	+		LRK53_RS06985	0.64	-0.9
1,574,102	+		LRK53_RS06985	0.64	+1.3
1,574,102	+		LRK53_RS06985	0.64	-0.4
1,574,102	+		LRK53_RS06985	0.64	-1.3
1,574,102	+		LRK53_RS06985	0.64	-0.7
1,574,103	-		LRK53_RS06985	0.64	+0.8
1,574,103	-		LRK53_RS06985	0.64	-0.5
1,574,265	-		LRK53_RS06985	0.81	-0.9
1,574,265	-		LRK53_RS06985	0.81	-0.7
1,574,265	-		LRK53_RS06985	0.81	-1.4
1,574,267	+		LRK53_RS06985	0.81	-1.3
1,574,267	+		LRK53_RS06985	0.81	-1.4
1,574,267	+		LRK53_RS06985	0.81	-1.5
1,574,267	+		LRK53_RS06985	0.81	-1.7
1,574,267	+		LRK53_RS06985	0.81	-1.6
1,574,267	+		LRK53_RS06985	0.81	-1.0
1,574,268	-		LRK53_RS06985	0.82	+0.5
1,574,268	-		LRK53_RS06985	0.82	-2.3
1,574,268	-		LRK53_RS06985	0.82	-2.9
1,574,268	-		LRK53_RS06985	0.82	-0.9
1,574,268	-		LRK53_RS06985	0.82	-1.3
1,574,352	-				-1.2
1,574,384	+				-1.5
1,574,384	+				+0.1
1,574,384	+				-0.9
1,574,384	+				+0.7
1,574,385	-				-0.3
1,574,385	-				-1.7
1,574,463	+				-0.5
1,574,463	+				-3.5
1,574,463	+				-0.0
1,574,463	+				-0.2
1,574,464	-				-0.5
1,574,464	-				-1.5
1,574,464	-				-3.9
1,574,464	-				-0.3
1,574,464	-				-1.7
1,574,464	-				-1.6
1,574,557	+				-0.2
1,574,558	-				+0.1
1,574,558	-				-0.5
1,574,627	+				-1.0
1,574,627	+				-0.1
1,574,628	-				-0.9
1,574,632	+				-1.0
1,574,632	+				-1.7
1,574,633	-				+0.2
1,574,633	-				+0.0
1,574,633	-				-0.5
1,574,636	+				-1.6
1,574,637	-				-0.3
1,574,637	-				+1.4
1,574,637	-				-0.4
1,574,660	-				+0.5
1,574,666	-				-1.8
1,574,666	-				-0.0
1,574,666	-				+0.8
1,574,666	-				-1.5
1,574,666	-				+0.3
1,574,684	+				-0.7
1,574,685	-				-2.6
1,574,685	-				-0.5
1,574,759	-				-1.8
1,574,763	-				+1.1
1,574,786	+				-2.4
1,574,786	+				-0.9
1,574,786	+				+0.3
1,574,787	-				-1.1
1,574,787	-				+0.3
1,574,787	-				-1.1
1,574,790	+				-0.5
1,574,790	+				-0.7
1,574,790	+				+0.3
1,574,790	+				+0.4
1,574,790	+				-0.6
1,574,790	+				-0.5
1,574,790	+				-1.4
1,574,790	+				-0.5
1,574,790	+				-0.1
1,574,791	-				-0.4
1,574,791	-				-1.6
1,574,791	-				-2.2
1,574,791	-				-0.2
1,574,791	-				-0.7
1,574,791	-				-2.3
1,574,791	-				-2.4
1,574,791	-				-0.2
1,574,791	-				-3.9
1,574,791	-				+0.5
1,574,791	-				-0.7
1,574,791	-				-2.2
1,574,791	-				-0.7
1,574,880	+		LRK53_RS06990	0.33	-1.2
1,574,880	+		LRK53_RS06990	0.33	+0.3
1,574,880	+		LRK53_RS06990	0.33	-2.4
1,574,880	+		LRK53_RS06990	0.33	-0.4
1,574,880	+		LRK53_RS06990	0.33	+1.1
1,574,880	+		LRK53_RS06990	0.33	-0.2
1,574,880	+		LRK53_RS06990	0.33	-0.0
1,574,881	-		LRK53_RS06990	0.33	+1.9
1,574,881	-		LRK53_RS06990	0.33	+0.2
1,574,894	-		LRK53_RS06990	0.38	-0.8
1,575,007	+		LRK53_RS06990	0.80	-1.2
1,575,010	+		LRK53_RS06990	0.81	-0.7
1,575,011	-		LRK53_RS06990	0.81	-0.3
1,575,058	+				-1.7
1,575,058	+				+1.5
1,575,058	+				-0.4
1,575,058	+				-0.3
1,575,058	+				-0.1
1,575,058	+				-1.0
1,575,058	+				+0.2
1,575,058	+				+0.1
1,575,058	+				-2.3
1,575,059	-				-1.5
1,575,059	-				-0.9
1,575,059	-				-2.4
1,575,059	-				-1.7
1,575,059	-				-0.3
1,575,059	-				-1.4
1,575,059	-				-1.3
1,575,059	-				+2.0
1,575,059	-				-2.4
1,575,072	+				+0.1
1,575,072	+				-0.3
1,575,073	-				-0.5
1,575,073	-				+0.8
1,575,073	-				-2.8
1,575,073	-				-3.0
1,575,126	+				-1.0
1,575,126	+				-1.0
1,575,162	+				-0.3
1,575,162	+				-0.7
1,575,162	+				-2.0
1,575,162	+				-1.0
1,575,162	+				-0.9
1,575,162	+				-0.3
1,575,162	+				-1.4
1,575,162	+				+0.5
1,575,162	+				-0.8
1,575,162	+				-0.7
1,575,162	+				-1.4
1,575,162	+				-0.8
1,575,162	+				+0.3
1,575,162	+				-0.9
1,575,162	+				-0.7
1,575,162	+				+1.4
1,575,162	+				-0.3
1,575,163	-				+0.1
1,575,163	-				-1.5
1,575,163	-				+0.8
1,575,163	-				+0.2
1,575,163	-				+0.1
1,575,163	-				-0.5
1,575,163	-				-1.4
1,575,167	+				-1.8
1,575,167	+				+2.3
1,575,255	-		LRK53_RS06995	0.10	+0.7
1,575,266	+		LRK53_RS06995	0.11	-0.8
1,575,284	+		LRK53_RS06995	0.12	-1.4
1,575,285	-		LRK53_RS06995	0.12	-1.0
1,575,290	+		LRK53_RS06995	0.12	-1.7
1,575,290	+		LRK53_RS06995	0.12	+0.4
1,575,290	+		LRK53_RS06995	0.12	-0.3
1,575,290	+		LRK53_RS06995	0.12	-0.5
1,575,290	+		LRK53_RS06995	0.12	-1.1
1,575,290	+		LRK53_RS06995	0.12	-1.2
1,575,291	-		LRK53_RS06995	0.12	-1.0
1,575,291	-		LRK53_RS06995	0.12	+1.4
1,575,291	-		LRK53_RS06995	0.12	-1.0
1,575,413	+		LRK53_RS06995	0.20	-1.8
1,575,413	+		LRK53_RS06995	0.20	-0.1
1,575,414	-		LRK53_RS06995	0.20	-1.9
1,575,414	-		LRK53_RS06995	0.20	-0.9