Strain Fitness in Erwinia amylovora T8 around OLJFJH_13100

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-4
2,757,211	+				+0.1
2,757,211	+				-0.4
2,757,211	+				+0.8
2,757,211	+				-0.9
2,757,266	+				+0.2
2,757,296	-				-0.3
2,757,318	-				+0.4
2,757,459	+		OLJFJH_13095	0.25	-0.3
2,757,459	+		OLJFJH_13095	0.25	-0.2
2,757,459	+		OLJFJH_13095	0.25	+0.8
2,757,459	+		OLJFJH_13095	0.25	-1.1
2,757,461	+		OLJFJH_13095	0.25	-0.4
2,757,610	+		OLJFJH_13095	0.50	+0.3
2,757,611	-		OLJFJH_13095	0.50	+0.7
2,757,611	-		OLJFJH_13095	0.50	+0.9
2,757,812	+		OLJFJH_13095	0.84	-0.2
2,757,859	-				-1.2
2,757,861	+				+0.1
2,757,861	+				-0.8
2,757,904	-				+0.3
2,757,957	+				+0.0
2,757,957	+				-0.3
2,757,958	-				-0.0
2,757,958	-				-0.4
2,757,976	-				+0.7
2,758,116	+				-0.0
2,758,162	-				+0.2
2,758,271	+		OLJFJH_13100	0.11	-0.1
2,758,271	+		OLJFJH_13100	0.11	-1.7
2,758,433	-		OLJFJH_13100	0.21	+0.7
2,758,435	-		OLJFJH_13100	0.21	+0.4
2,758,509	+		OLJFJH_13100	0.25	+0.1
2,758,510	-		OLJFJH_13100	0.25	-0.3
2,758,510	-		OLJFJH_13100	0.25	-1.0
2,758,614	+		OLJFJH_13100	0.31	-1.0
2,758,618	+		OLJFJH_13100	0.31	-0.8
2,758,618	+		OLJFJH_13100	0.31	+1.9
2,758,618	+		OLJFJH_13100	0.31	-0.0
2,758,618	+		OLJFJH_13100	0.31	+0.0
2,758,619	-		OLJFJH_13100	0.31	-1.4
2,758,702	+		OLJFJH_13100	0.36	-0.2
2,758,703	-		OLJFJH_13100	0.36	-1.4
2,758,723	-		OLJFJH_13100	0.38	-0.1
2,758,747	+		OLJFJH_13100	0.39	-0.6
2,758,748	-		OLJFJH_13100	0.39	-0.5
2,758,748	-		OLJFJH_13100	0.39	-0.7
2,758,750	-		OLJFJH_13100	0.39	-1.2
2,758,800	+		OLJFJH_13100	0.42	+0.2
2,758,824	+		OLJFJH_13100	0.43	-0.6
2,758,835	-		OLJFJH_13100	0.44	+0.7
2,758,835	-		OLJFJH_13100	0.44	-0.2
2,758,868	+		OLJFJH_13100	0.46	+0.8
2,758,888	+		OLJFJH_13100	0.47	+0.2
2,758,893	+		OLJFJH_13100	0.47	-0.4
2,758,893	+		OLJFJH_13100	0.47	-1.5
2,758,893	+		OLJFJH_13100	0.47	-0.6
2,758,893	+		OLJFJH_13100	0.47	+1.2
2,758,896	-		OLJFJH_13100	0.48	+0.2
2,758,896	-		OLJFJH_13100	0.48	-2.4
2,758,919	+		OLJFJH_13100	0.49	-0.0
2,758,926	+		OLJFJH_13100	0.49	-0.2
2,758,926	+		OLJFJH_13100	0.49	-0.2
2,758,960	-		OLJFJH_13100	0.51	+0.0
2,758,960	-		OLJFJH_13100	0.51	-1.5
2,759,120	+		OLJFJH_13100	0.61	-1.4
2,759,121	-		OLJFJH_13100	0.61	-0.8
2,759,165	-		OLJFJH_13100	0.63	-1.0
2,759,226	+		OLJFJH_13100	0.67	+1.0
2,759,278	-		OLJFJH_13100	0.70	+0.2
2,759,334	+		OLJFJH_13100	0.73	-0.6
2,759,424	+		OLJFJH_13100	0.78	+0.6
2,759,821	+				+0.2
2,759,821	+				+0.0
2,759,821	+				+0.7
2,759,821	+				-0.5
2,759,822	-				-0.4
2,759,822	-				+1.1
2,759,822	-				+0.2
2,759,822	-				-1.0
2,759,822	-				+0.5
2,759,822	-				+0.7
2,759,825	-				-0.3
2,759,825	-				-0.5
2,759,859	+				+0.1
2,759,860	-				+0.3
2,759,860	-				-1.0
2,759,860	-				+1.0
2,759,862	+				+1.5
2,759,862	+				-1.1
2,759,914	-				+0.2
2,760,015	+				+4.3
2,760,037	+		OLJFJH_13105	0.11	+0.7
2,760,037	+		OLJFJH_13105	0.11	+0.5
2,760,037	+		OLJFJH_13105	0.11	-0.4
2,760,037	+		OLJFJH_13105	0.11	+1.5
2,760,038	-		OLJFJH_13105	0.11	+0.6
2,760,046	-		OLJFJH_13105	0.11	-0.8
2,760,046	-		OLJFJH_13105	0.11	-0.8
2,760,059	+		OLJFJH_13105	0.13	-0.3
2,760,060	-		OLJFJH_13105	0.13	-0.0
2,760,138	+		OLJFJH_13105	0.20	-0.4
2,760,379	-		OLJFJH_13105	0.41	+0.1
2,760,379	-		OLJFJH_13105	0.41	-0.9
2,760,688	+		OLJFJH_13105	0.69	+0.3
2,760,688	+		OLJFJH_13105	0.69	+1.7