Strain Fitness in Erwinia amylovora T8 around OLJFJH_05645

Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-4
1,148,221	+		OLJFJH_05635	0.59	-3.6
1,148,648	+				-0.3
1,148,649	-				-4.8
1,148,898	+		OLJFJH_05640	0.43	-1.1
1,148,901	-		OLJFJH_05640	0.44	-0.5
1,149,070	-		OLJFJH_05640	0.78	+0.9
1,149,203	+				+1.6
1,149,308	+		OLJFJH_05645	0.22	-0.4
1,149,345	-		OLJFJH_05645	0.29	-1.8
1,149,424	+		OLJFJH_05645	0.42	-0.5
1,149,726	-				+0.9
1,149,744	-				-0.9
1,149,793	+				-1.3
1,149,799	+				+0.4
1,149,898	-				+0.1
1,150,006	+				+0.3
1,150,056	+				+0.1
1,150,057	-				+0.6
1,150,063	+				-1.2
1,150,089	-				+0.5
1,150,118	+				+0.1
1,150,118	+				-1.1
1,150,118	+				-0.1
1,150,118	+				-0.7
1,150,151	+		OLJFJH_05650	0.11	-0.0
1,150,152	-		OLJFJH_05650	0.12	-1.1
1,150,168	+		OLJFJH_05650	0.16	+1.2
1,150,265	+		OLJFJH_05650	0.43	-0.5
1,150,266	-		OLJFJH_05650	0.43	-0.2
1,150,365	+		OLJFJH_05650	0.71	+1.4
1,150,366	-		OLJFJH_05650	0.71	+0.8
1,150,446	-				+0.5
1,150,566	+				+0.1
1,150,574	-				+1.1
1,150,574	-				+0.4
1,150,602	+				+1.2
1,150,657	-				-0.3
1,150,700	-		OLJFJH_05655	0.11	+2.5
1,150,730	+		OLJFJH_05655	0.14	+0.2
1,150,730	+		OLJFJH_05655	0.14	-0.3
1,150,730	+		OLJFJH_05655	0.14	+0.8
1,150,730	+		OLJFJH_05655	0.14	+1.6