Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01365 and A4249_RS01370 overlap by 4 nucleotides A4249_RS01370 and A4249_RS01375 overlap by 4 nucleotides A4249_RS01375 and A4249_RS16455 are separated by 47 nucleotides A4249_RS16455 and A4249_RS01390 are separated by 652 nucleotides
A4249_RS01365: A4249_RS01365 - hypothetical protein, at 257,506 to 257,952
_RS01365
A4249_RS01370: A4249_RS01370 - DUF6525 family protein, at 257,949 to 258,197
_RS01370
A4249_RS01375: A4249_RS01375 - hypothetical protein, at 258,194 to 258,655
_RS01375
A4249_RS16455: A4249_RS16455 - helix-turn-helix transcriptional regulator, at 258,703 to 259,320
_RS16455
A4249_RS01390: A4249_RS01390 - hypothetical protein, at 259,973 to 260,203
_RS01390
Position (kb) 258
259
260 Strain fitness (log2 ratio) -2
-1
0
1
2 at 258.759 kb on + strand at 258.857 kb on + strand, within A4249_RS16455 at 258.918 kb on + strand, within A4249_RS16455 at 258.918 kb on + strand, within A4249_RS16455 at 259.318 kb on + strand at 259.363 kb on + strand at 259.363 kb on + strand at 259.363 kb on + strand at 259.363 kb on + strand at 259.447 kb on + strand at 259.447 kb on + strand at 259.447 kb on + strand at 259.447 kb on + strand at 259.447 kb on + strand at 259.447 kb on + strand at 259.450 kb on + strand at 259.450 kb on + strand at 259.450 kb on + strand at 259.450 kb on + strand at 259.450 kb on + strand at 259.450 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.492 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.495 kb on + strand at 259.573 kb on + strand at 259.573 kb on + strand at 259.592 kb on + strand at 259.619 kb on + strand at 259.619 kb on + strand at 259.619 kb on + strand at 259.620 kb on - strand at 259.620 kb on - strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.621 kb on + strand at 259.622 kb on - strand at 259.642 kb on + strand at 259.642 kb on + strand at 259.642 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.669 kb on + strand at 259.670 kb on - strand at 259.670 kb on - strand at 259.670 kb on - strand at 259.778 kb on + strand at 259.779 kb on - strand at 259.779 kb on - strand at 259.798 kb on + strand at 259.878 kb on + strand at 259.940 kb on + strand at 259.940 kb on + strand at 259.940 kb on + strand at 259.940 kb on + strand at 259.941 kb on - strand at 259.949 kb on + strand at 259.949 kb on + strand at 259.968 kb on + strand at 259.968 kb on + strand at 259.968 kb on + strand at 259.974 kb on + strand at 259.974 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 258,759 + +0.1 258,857 + A4249_RS16455 0.25 -0.3 258,918 + A4249_RS16455 0.35 -1.1 258,918 + A4249_RS16455 0.35 -0.6 259,318 + +0.5 259,363 + +1.0 259,363 + +0.2 259,363 + -0.1 259,363 + -1.0 259,447 + +0.2 259,447 + -1.1 259,447 + +0.9 259,447 + +0.4 259,447 + -0.6 259,447 + +0.0 259,450 + -0.5 259,450 + +0.8 259,450 + -0.1 259,450 + +0.1 259,450 + -0.1 259,450 + -0.1 259,492 + -1.1 259,492 + -0.2 259,492 + -0.2 259,492 + +0.4 259,492 + -0.4 259,492 + -0.4 259,492 + -0.3 259,492 + +0.1 259,492 + -0.6 259,492 + +0.7 259,492 + -0.6 259,492 + -0.1 259,495 + -0.7 259,495 + +0.6 259,495 + -0.2 259,495 + +0.1 259,495 + +0.9 259,495 + +0.4 259,495 + +0.1 259,495 + +0.1 259,495 + +2.5 259,573 + -0.2 259,573 + +0.3 259,592 + +0.7 259,619 + +1.1 259,619 + -0.7 259,619 + +1.1 259,620 - -0.6 259,620 - -1.3 259,621 + +0.5 259,621 + -0.0 259,621 + -1.3 259,621 + -0.2 259,621 + +0.3 259,621 + +1.2 259,621 + +0.7 259,621 + -1.2 259,621 + +0.4 259,622 - -1.8 259,642 + -0.7 259,642 + +1.2 259,642 + -1.5 259,669 + +0.6 259,669 + -0.4 259,669 + +0.2 259,669 + +1.1 259,669 + -0.7 259,669 + -0.2 259,669 + +0.9 259,669 + -0.2 259,669 + +0.9 259,669 + +0.3 259,669 + +0.1 259,669 + -0.1 259,669 + +0.7 259,669 + +0.9 259,669 + +0.5 259,669 + +0.1 259,669 + +0.1 259,669 + +1.0 259,669 + +0.4 259,669 + +0.3 259,670 - -1.4 259,670 - -0.3 259,670 - -0.6 259,778 + +0.2 259,779 - -1.5 259,779 - +0.3 259,798 + -0.2 259,878 + -1.1 259,940 + -2.5 259,940 + -0.7 259,940 + -0.1 259,940 + +0.1 259,941 - -0.1 259,949 + +0.2 259,949 + +0.0 259,968 + +0.1 259,968 + +0.5 259,968 + -1.0 259,974 + -0.2 259,974 + -0.6
Or see this region's nucleotide sequence