Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15180

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15175 and A4249_RS15180 are separated by 78 nucleotidesA4249_RS15180 and A4249_RS15185 are separated by 186 nucleotides A4249_RS15175: A4249_RS15175 - hypothetical protein, at 3,067,576 to 3,068,487 _RS15175 A4249_RS15180: A4249_RS15180 - hypothetical protein, at 3,068,566 to 3,068,988 _RS15180 A4249_RS15185: A4249_RS15185 - bile acid:sodium symporter, at 3,069,175 to 3,070,170 _RS15185 Position (kb) 3068 3069Strain fitness (log2 ratio) -1 0 1at 3067.590 kb on + strandat 3067.591 kb on - strandat 3067.591 kb on - strandat 3067.763 kb on + strand, within A4249_RS15175at 3067.857 kb on + strand, within A4249_RS15175at 3067.857 kb on + strand, within A4249_RS15175at 3067.858 kb on - strand, within A4249_RS15175at 3067.858 kb on - strand, within A4249_RS15175at 3067.858 kb on - strand, within A4249_RS15175at 3067.858 kb on - strand, within A4249_RS15175at 3067.865 kb on - strand, within A4249_RS15175at 3067.865 kb on - strand, within A4249_RS15175at 3068.026 kb on + strand, within A4249_RS15175at 3068.026 kb on + strand, within A4249_RS15175at 3068.026 kb on + strand, within A4249_RS15175at 3068.026 kb on + strand, within A4249_RS15175at 3068.026 kb on + strand, within A4249_RS15175at 3068.026 kb on + strand, within A4249_RS15175at 3068.027 kb on - strand, within A4249_RS15175at 3068.027 kb on - strand, within A4249_RS15175at 3068.132 kb on + strand, within A4249_RS15175at 3068.133 kb on - strand, within A4249_RS15175at 3068.133 kb on - strand, within A4249_RS15175at 3068.133 kb on - strand, within A4249_RS15175at 3068.221 kb on + strand, within A4249_RS15175at 3068.221 kb on + strand, within A4249_RS15175at 3068.221 kb on + strand, within A4249_RS15175at 3068.221 kb on + strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.222 kb on - strand, within A4249_RS15175at 3068.243 kb on - strand, within A4249_RS15175at 3068.244 kb on + strand, within A4249_RS15175at 3068.244 kb on + strand, within A4249_RS15175at 3068.244 kb on + strand, within A4249_RS15175at 3068.244 kb on + strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.245 kb on - strand, within A4249_RS15175at 3068.302 kb on + strand, within A4249_RS15175at 3068.302 kb on + strand, within A4249_RS15175at 3068.302 kb on + strand, within A4249_RS15175at 3068.302 kb on + strand, within A4249_RS15175at 3068.302 kb on + strand, within A4249_RS15175at 3068.303 kb on - strand, within A4249_RS15175at 3068.303 kb on - strand, within A4249_RS15175at 3068.303 kb on - strand, within A4249_RS15175at 3068.303 kb on - strand, within A4249_RS15175at 3068.303 kb on - strand, within A4249_RS15175at 3068.303 kb on - strand, within A4249_RS15175at 3068.311 kb on + strand, within A4249_RS15175at 3068.311 kb on + strand, within A4249_RS15175at 3068.311 kb on + strand, within A4249_RS15175at 3068.449 kb on + strandat 3068.450 kb on - strandat 3068.485 kb on + strandat 3068.485 kb on + strandat 3068.485 kb on + strandat 3068.486 kb on - strandat 3068.486 kb on - strandat 3068.486 kb on - strandat 3068.486 kb on - strandat 3068.630 kb on + strand, within A4249_RS15180at 3068.631 kb on - strand, within A4249_RS15180at 3068.631 kb on - strand, within A4249_RS15180at 3068.714 kb on + strand, within A4249_RS15180at 3068.714 kb on + strand, within A4249_RS15180at 3068.714 kb on + strand, within A4249_RS15180at 3068.715 kb on - strand, within A4249_RS15180at 3068.715 kb on - strand, within A4249_RS15180at 3068.715 kb on - strand, within A4249_RS15180at 3068.754 kb on - strand, within A4249_RS15180at 3068.886 kb on - strand, within A4249_RS15180at 3068.886 kb on - strand, within A4249_RS15180at 3068.886 kb on - strand, within A4249_RS15180at 3068.886 kb on - strand, within A4249_RS15180at 3068.886 kb on - strand, within A4249_RS15180at 3068.976 kb on + strandat 3068.976 kb on + strandat 3068.977 kb on - strandat 3068.977 kb on - strandat 3069.024 kb on - strandat 3069.024 kb on - strandat 3069.024 kb on - strandat 3069.024 kb on - strandat 3069.024 kb on - strandat 3069.024 kb on - strandat 3069.024 kb on - strandat 3069.114 kb on + strandat 3069.115 kb on - strandat 3069.126 kb on + strandat 3069.127 kb on - strandat 3069.129 kb on + strandat 3069.130 kb on - strandat 3069.177 kb on - strandat 3069.221 kb on + strandat 3069.221 kb on + strandat 3069.222 kb on - strandat 3069.222 kb on - strandat 3069.222 kb on - strandat 3069.536 kb on + strand, within A4249_RS15185at 3069.536 kb on + strand, within A4249_RS15185at 3069.536 kb on + strand, within A4249_RS15185at 3069.536 kb on + strand, within A4249_RS15185at 3069.537 kb on - strand, within A4249_RS15185at 3069.851 kb on + strand, within A4249_RS15185at 3069.851 kb on + strand, within A4249_RS15185at 3069.851 kb on + strand, within A4249_RS15185at 3069.851 kb on + strand, within A4249_RS15185at 3069.851 kb on + strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185at 3069.852 kb on - strand, within A4249_RS15185

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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3,067,590 + -0.3
3,067,591 - -1.2
3,067,591 - +0.0
3,067,763 + A4249_RS15175 0.21 +0.0
3,067,857 + A4249_RS15175 0.31 -0.4
3,067,857 + A4249_RS15175 0.31 +0.5
3,067,858 - A4249_RS15175 0.31 -0.4
3,067,858 - A4249_RS15175 0.31 +0.4
3,067,858 - A4249_RS15175 0.31 +1.5
3,067,858 - A4249_RS15175 0.31 +0.0
3,067,865 - A4249_RS15175 0.32 +1.0
3,067,865 - A4249_RS15175 0.32 +0.5
3,068,026 + A4249_RS15175 0.49 +0.3
3,068,026 + A4249_RS15175 0.49 +0.1
3,068,026 + A4249_RS15175 0.49 -0.4
3,068,026 + A4249_RS15175 0.49 -1.4
3,068,026 + A4249_RS15175 0.49 +0.2
3,068,026 + A4249_RS15175 0.49 -0.2
3,068,027 - A4249_RS15175 0.49 -0.6
3,068,027 - A4249_RS15175 0.49 +0.1
3,068,132 + A4249_RS15175 0.61 +0.2
3,068,133 - A4249_RS15175 0.61 +0.7
3,068,133 - A4249_RS15175 0.61 +0.9
3,068,133 - A4249_RS15175 0.61 -0.2
3,068,221 + A4249_RS15175 0.71 +0.1
3,068,221 + A4249_RS15175 0.71 +0.4
3,068,221 + A4249_RS15175 0.71 -0.3
3,068,221 + A4249_RS15175 0.71 -0.4
3,068,222 - A4249_RS15175 0.71 +0.4
3,068,222 - A4249_RS15175 0.71 -0.1
3,068,222 - A4249_RS15175 0.71 -0.5
3,068,222 - A4249_RS15175 0.71 -1.3
3,068,222 - A4249_RS15175 0.71 -0.8
3,068,222 - A4249_RS15175 0.71 -0.5
3,068,222 - A4249_RS15175 0.71 +0.5
3,068,222 - A4249_RS15175 0.71 -0.0
3,068,243 - A4249_RS15175 0.73 -0.8
3,068,244 + A4249_RS15175 0.73 -0.0
3,068,244 + A4249_RS15175 0.73 -0.3
3,068,244 + A4249_RS15175 0.73 -0.0
3,068,244 + A4249_RS15175 0.73 -0.5
3,068,245 - A4249_RS15175 0.73 +0.1
3,068,245 - A4249_RS15175 0.73 -0.3
3,068,245 - A4249_RS15175 0.73 -0.1
3,068,245 - A4249_RS15175 0.73 -0.4
3,068,245 - A4249_RS15175 0.73 +0.1
3,068,245 - A4249_RS15175 0.73 +0.0
3,068,245 - A4249_RS15175 0.73 +0.8
3,068,245 - A4249_RS15175 0.73 -1.0
3,068,302 + A4249_RS15175 0.80 +0.8
3,068,302 + A4249_RS15175 0.80 +0.1
3,068,302 + A4249_RS15175 0.80 +0.7
3,068,302 + A4249_RS15175 0.80 +0.1
3,068,302 + A4249_RS15175 0.80 +0.9
3,068,303 - A4249_RS15175 0.80 +0.4
3,068,303 - A4249_RS15175 0.80 -1.2
3,068,303 - A4249_RS15175 0.80 +0.4
3,068,303 - A4249_RS15175 0.80 +0.4
3,068,303 - A4249_RS15175 0.80 -0.6
3,068,303 - A4249_RS15175 0.80 +0.9
3,068,311 + A4249_RS15175 0.81 +1.0
3,068,311 + A4249_RS15175 0.81 +0.6
3,068,311 + A4249_RS15175 0.81 -0.3
3,068,449 + -0.8
3,068,450 - +0.8
3,068,485 + -0.3
3,068,485 + -0.1
3,068,485 + +1.1
3,068,486 - +0.2
3,068,486 - +0.3
3,068,486 - +0.4
3,068,486 - +0.9
3,068,630 + A4249_RS15180 0.15 -0.8
3,068,631 - A4249_RS15180 0.15 +1.1
3,068,631 - A4249_RS15180 0.15 +0.6
3,068,714 + A4249_RS15180 0.35 -0.0
3,068,714 + A4249_RS15180 0.35 -0.1
3,068,714 + A4249_RS15180 0.35 -0.4
3,068,715 - A4249_RS15180 0.35 +0.5
3,068,715 - A4249_RS15180 0.35 -0.4
3,068,715 - A4249_RS15180 0.35 +0.4
3,068,754 - A4249_RS15180 0.44 -0.7
3,068,886 - A4249_RS15180 0.76 +0.1
3,068,886 - A4249_RS15180 0.76 -0.1
3,068,886 - A4249_RS15180 0.76 -0.6
3,068,886 - A4249_RS15180 0.76 -0.2
3,068,886 - A4249_RS15180 0.76 -0.6
3,068,976 + -0.0
3,068,976 + -0.4
3,068,977 - +0.3
3,068,977 - +0.4
3,069,024 - +1.2
3,069,024 - -1.6
3,069,024 - +0.4
3,069,024 - -0.8
3,069,024 - +0.1
3,069,024 - +0.1
3,069,024 - +0.6
3,069,114 + +0.0
3,069,115 - -0.3
3,069,126 + -0.2
3,069,127 - +0.1
3,069,129 + -0.2
3,069,130 - +0.2
3,069,177 - +0.4
3,069,221 + +0.5
3,069,221 + -0.4
3,069,222 - -0.3
3,069,222 - +0.2
3,069,222 - +1.2
3,069,536 + A4249_RS15185 0.36 +0.2
3,069,536 + A4249_RS15185 0.36 -0.7
3,069,536 + A4249_RS15185 0.36 +0.2
3,069,536 + A4249_RS15185 0.36 +0.0
3,069,537 - A4249_RS15185 0.36 +1.4
3,069,851 + A4249_RS15185 0.68 +0.3
3,069,851 + A4249_RS15185 0.68 +0.4
3,069,851 + A4249_RS15185 0.68 -1.2
3,069,851 + A4249_RS15185 0.68 -0.8
3,069,851 + A4249_RS15185 0.68 -1.0
3,069,852 - A4249_RS15185 0.68 -0.1
3,069,852 - A4249_RS15185 0.68 +0.3
3,069,852 - A4249_RS15185 0.68 -0.7
3,069,852 - A4249_RS15185 0.68 +0.5
3,069,852 - A4249_RS15185 0.68 -0.1
3,069,852 - A4249_RS15185 0.68 +0.4
3,069,852 - A4249_RS15185 0.68 +0.4
3,069,852 - A4249_RS15185 0.68 -0.5
3,069,852 - A4249_RS15185 0.68 +1.1
3,069,852 - A4249_RS15185 0.68 +0.9

Or see this region's nucleotide sequence