Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14955 and A4249_RS14960 are separated by 1 nucleotides A4249_RS14960 and A4249_RS14965 are separated by 98 nucleotides A4249_RS14965 and A4249_RS14970 overlap by 4 nucleotides
A4249_RS14955: A4249_RS14955 - signal recognition particle-docking protein FtsY, at 3,026,695 to 3,027,630
_RS14955
A4249_RS14960: A4249_RS14960 - septation protein IspZ, at 3,027,632 to 3,028,252
_RS14960
A4249_RS14965: A4249_RS14965 - MarR family transcriptional regulator, at 3,028,351 to 3,028,965
_RS14965
A4249_RS14970: A4249_RS14970 - phasin, at 3,028,962 to 3,029,360
_RS14970
Position (kb)
3027
3028
3029 Strain fitness (log2 ratio)
-2
-1
0
1 at 3026.683 kb on + strand at 3027.812 kb on + strand, within A4249_RS14960 at 3027.813 kb on - strand, within A4249_RS14960 at 3027.813 kb on - strand, within A4249_RS14960 at 3027.813 kb on - strand, within A4249_RS14960 at 3027.995 kb on + strand, within A4249_RS14960 at 3027.995 kb on + strand, within A4249_RS14960 at 3027.995 kb on + strand, within A4249_RS14960 at 3027.996 kb on - strand, within A4249_RS14960 at 3027.996 kb on - strand, within A4249_RS14960 at 3027.996 kb on - strand, within A4249_RS14960 at 3028.064 kb on + strand, within A4249_RS14960 at 3028.064 kb on + strand, within A4249_RS14960 at 3028.064 kb on + strand, within A4249_RS14960 at 3028.065 kb on - strand, within A4249_RS14960 at 3028.065 kb on - strand, within A4249_RS14960 at 3028.083 kb on + strand, within A4249_RS14960 at 3028.083 kb on + strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.084 kb on - strand, within A4249_RS14960 at 3028.250 kb on + strand at 3028.251 kb on - strand at 3028.251 kb on - strand at 3028.251 kb on - strand at 3028.303 kb on - strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.316 kb on + strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.317 kb on - strand at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.447 kb on + strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.448 kb on - strand, within A4249_RS14965 at 3028.840 kb on - strand, within A4249_RS14965 at 3028.964 kb on - strand at 3028.964 kb on - strand at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.101 kb on + strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970 at 3029.102 kb on - strand, within A4249_RS14970
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 3,026,683 + -0.6 3,027,812 + A4249_RS14960 0.29 +0.4 3,027,813 - A4249_RS14960 0.29 -0.5 3,027,813 - A4249_RS14960 0.29 -0.7 3,027,813 - A4249_RS14960 0.29 -0.0 3,027,995 + A4249_RS14960 0.58 -1.1 3,027,995 + A4249_RS14960 0.58 -0.4 3,027,995 + A4249_RS14960 0.58 -0.6 3,027,996 - A4249_RS14960 0.59 -0.3 3,027,996 - A4249_RS14960 0.59 -0.5 3,027,996 - A4249_RS14960 0.59 +0.1 3,028,064 + A4249_RS14960 0.70 +0.5 3,028,064 + A4249_RS14960 0.70 -0.1 3,028,064 + A4249_RS14960 0.70 -0.5 3,028,065 - A4249_RS14960 0.70 +0.7 3,028,065 - A4249_RS14960 0.70 +1.4 3,028,083 + A4249_RS14960 0.73 +0.3 3,028,083 + A4249_RS14960 0.73 +0.2 3,028,084 - A4249_RS14960 0.73 +0.3 3,028,084 - A4249_RS14960 0.73 -0.3 3,028,084 - A4249_RS14960 0.73 +0.1 3,028,084 - A4249_RS14960 0.73 -2.1 3,028,250 + -1.6 3,028,251 - -0.9 3,028,251 - +0.4 3,028,251 - +0.4 3,028,303 - +0.4 3,028,316 + -0.3 3,028,316 + -0.2 3,028,316 + +0.8 3,028,316 + +0.4 3,028,316 + -0.2 3,028,316 + -0.7 3,028,317 - -0.4 3,028,317 - -0.2 3,028,317 - +0.1 3,028,317 - -1.8 3,028,317 - -1.7 3,028,447 + A4249_RS14965 0.16 -0.5 3,028,447 + A4249_RS14965 0.16 -0.5 3,028,447 + A4249_RS14965 0.16 +0.2 3,028,447 + A4249_RS14965 0.16 +0.7 3,028,447 + A4249_RS14965 0.16 +0.4 3,028,447 + A4249_RS14965 0.16 -0.3 3,028,447 + A4249_RS14965 0.16 +0.3 3,028,447 + A4249_RS14965 0.16 -0.2 3,028,448 - A4249_RS14965 0.16 -1.7 3,028,448 - A4249_RS14965 0.16 -0.8 3,028,448 - A4249_RS14965 0.16 -0.0 3,028,448 - A4249_RS14965 0.16 -0.1 3,028,448 - A4249_RS14965 0.16 +0.3 3,028,448 - A4249_RS14965 0.16 +0.6 3,028,448 - A4249_RS14965 0.16 -0.7 3,028,448 - A4249_RS14965 0.16 +0.3 3,028,840 - A4249_RS14965 0.80 +0.6 3,028,964 - -0.8 3,028,964 - +0.4 3,029,101 + A4249_RS14970 0.35 +0.4 3,029,101 + A4249_RS14970 0.35 +0.4 3,029,101 + A4249_RS14970 0.35 +0.4 3,029,101 + A4249_RS14970 0.35 +0.7 3,029,101 + A4249_RS14970 0.35 -0.1 3,029,101 + A4249_RS14970 0.35 -0.1 3,029,101 + A4249_RS14970 0.35 -0.4 3,029,102 - A4249_RS14970 0.35 +0.1 3,029,102 - A4249_RS14970 0.35 +0.9 3,029,102 - A4249_RS14970 0.35 -0.0 3,029,102 - A4249_RS14970 0.35 -0.8 3,029,102 - A4249_RS14970 0.35 -1.4 3,029,102 - A4249_RS14970 0.35 +0.6 3,029,102 - A4249_RS14970 0.35 +0.6
Or see this region's nucleotide sequence