Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14840 and A4249_RS14845 are separated by 13 nucleotides A4249_RS14845 and A4249_RS14850 are separated by 315 nucleotides
A4249_RS14840: A4249_RS14840 - carboxynorspermidine decarboxylase, at 3,003,464 to 3,004,636
_RS14840
A4249_RS14845: A4249_RS14845 - saccharopine dehydrogenase family protein, at 3,004,650 to 3,005,855
_RS14845
A4249_RS14850: A4249_RS14850 - signal recognition particle protein, at 3,006,171 to 3,007,706
_RS14850
Position (kb)
3004
3005
3006 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3003.654 kb on + strand, within A4249_RS14840 at 3003.654 kb on + strand, within A4249_RS14840 at 3003.654 kb on + strand, within A4249_RS14840 at 3003.654 kb on + strand, within A4249_RS14840 at 3003.769 kb on + strand, within A4249_RS14840 at 3003.770 kb on - strand, within A4249_RS14840 at 3003.885 kb on + strand, within A4249_RS14840 at 3003.886 kb on - strand, within A4249_RS14840 at 3004.084 kb on + strand, within A4249_RS14840 at 3004.170 kb on + strand, within A4249_RS14840 at 3004.170 kb on + strand, within A4249_RS14840 at 3004.170 kb on + strand, within A4249_RS14840 at 3004.171 kb on - strand, within A4249_RS14840 at 3004.171 kb on - strand, within A4249_RS14840 at 3004.342 kb on + strand, within A4249_RS14840 at 3004.342 kb on + strand, within A4249_RS14840 at 3004.345 kb on - strand, within A4249_RS14840 at 3004.345 kb on - strand, within A4249_RS14840 at 3004.345 kb on - strand, within A4249_RS14840 at 3004.356 kb on + strand, within A4249_RS14840 at 3004.356 kb on + strand, within A4249_RS14840 at 3004.356 kb on + strand, within A4249_RS14840 at 3004.356 kb on + strand, within A4249_RS14840 at 3004.356 kb on + strand, within A4249_RS14840 at 3004.357 kb on - strand, within A4249_RS14840 at 3004.377 kb on + strand, within A4249_RS14840 at 3004.378 kb on - strand, within A4249_RS14840 at 3004.378 kb on - strand, within A4249_RS14840 at 3004.378 kb on - strand, within A4249_RS14840 at 3004.378 kb on - strand, within A4249_RS14840 at 3004.406 kb on + strand, within A4249_RS14840 at 3004.406 kb on + strand, within A4249_RS14840 at 3004.407 kb on - strand, within A4249_RS14840 at 3004.434 kb on + strand, within A4249_RS14840 at 3004.435 kb on - strand, within A4249_RS14840 at 3004.822 kb on + strand, within A4249_RS14845 at 3004.823 kb on - strand, within A4249_RS14845 at 3004.823 kb on - strand, within A4249_RS14845 at 3004.823 kb on - strand, within A4249_RS14845 at 3004.823 kb on - strand, within A4249_RS14845 at 3004.852 kb on + strand, within A4249_RS14845 at 3004.852 kb on + strand, within A4249_RS14845 at 3004.852 kb on + strand, within A4249_RS14845 at 3004.853 kb on - strand, within A4249_RS14845 at 3004.853 kb on - strand, within A4249_RS14845 at 3004.853 kb on - strand, within A4249_RS14845 at 3004.853 kb on - strand, within A4249_RS14845 at 3004.853 kb on - strand, within A4249_RS14845 at 3004.885 kb on + strand, within A4249_RS14845 at 3004.885 kb on + strand, within A4249_RS14845 at 3004.886 kb on - strand, within A4249_RS14845 at 3004.886 kb on - strand, within A4249_RS14845 at 3005.086 kb on + strand, within A4249_RS14845 at 3005.086 kb on + strand, within A4249_RS14845 at 3005.086 kb on + strand, within A4249_RS14845 at 3005.087 kb on - strand, within A4249_RS14845 at 3005.087 kb on - strand, within A4249_RS14845 at 3005.087 kb on - strand, within A4249_RS14845 at 3005.087 kb on - strand, within A4249_RS14845 at 3005.087 kb on - strand, within A4249_RS14845 at 3005.087 kb on - strand, within A4249_RS14845 at 3005.124 kb on - strand, within A4249_RS14845 at 3005.134 kb on + strand, within A4249_RS14845 at 3005.167 kb on + strand, within A4249_RS14845 at 3005.167 kb on + strand, within A4249_RS14845 at 3005.167 kb on + strand, within A4249_RS14845 at 3005.167 kb on + strand, within A4249_RS14845 at 3005.168 kb on - strand, within A4249_RS14845 at 3005.168 kb on - strand, within A4249_RS14845 at 3005.168 kb on - strand, within A4249_RS14845 at 3005.168 kb on - strand, within A4249_RS14845 at 3005.176 kb on + strand, within A4249_RS14845 at 3005.176 kb on + strand, within A4249_RS14845 at 3005.176 kb on + strand, within A4249_RS14845 at 3005.176 kb on + strand, within A4249_RS14845 at 3005.176 kb on + strand, within A4249_RS14845 at 3005.176 kb on + strand, within A4249_RS14845 at 3005.177 kb on - strand, within A4249_RS14845 at 3005.177 kb on - strand, within A4249_RS14845 at 3005.177 kb on - strand, within A4249_RS14845 at 3005.177 kb on - strand, within A4249_RS14845 at 3005.177 kb on - strand, within A4249_RS14845 at 3005.177 kb on - strand, within A4249_RS14845 at 3005.398 kb on + strand, within A4249_RS14845 at 3005.398 kb on + strand, within A4249_RS14845 at 3005.398 kb on + strand, within A4249_RS14845 at 3005.398 kb on + strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.399 kb on - strand, within A4249_RS14845 at 3005.482 kb on + strand, within A4249_RS14845 at 3005.482 kb on + strand, within A4249_RS14845 at 3005.483 kb on - strand, within A4249_RS14845 at 3005.483 kb on - strand, within A4249_RS14845 at 3005.500 kb on + strand, within A4249_RS14845 at 3005.500 kb on + strand, within A4249_RS14845 at 3005.501 kb on - strand, within A4249_RS14845 at 3005.501 kb on - strand, within A4249_RS14845 at 3005.501 kb on - strand, within A4249_RS14845 at 3005.501 kb on - strand, within A4249_RS14845 at 3005.501 kb on - strand, within A4249_RS14845 at 3005.501 kb on - strand, within A4249_RS14845 at 3005.530 kb on + strand, within A4249_RS14845 at 3005.530 kb on + strand, within A4249_RS14845 at 3005.530 kb on + strand, within A4249_RS14845 at 3005.530 kb on + strand, within A4249_RS14845 at 3005.531 kb on - strand, within A4249_RS14845 at 3005.531 kb on - strand, within A4249_RS14845 at 3005.549 kb on - strand, within A4249_RS14845 at 3005.549 kb on - strand, within A4249_RS14845 at 3005.586 kb on + strand, within A4249_RS14845 at 3005.586 kb on + strand, within A4249_RS14845 at 3005.586 kb on + strand, within A4249_RS14845 at 3005.587 kb on - strand, within A4249_RS14845 at 3005.587 kb on - strand, within A4249_RS14845 at 3005.768 kb on + strand at 3005.768 kb on + strand at 3005.768 kb on + strand at 3005.769 kb on - strand at 3005.769 kb on - strand at 3005.769 kb on - strand at 3005.769 kb on - strand at 3005.769 kb on - strand at 3005.769 kb on - strand at 3005.901 kb on + strand at 3005.902 kb on - strand at 3005.903 kb on + strand at 3005.903 kb on + strand at 3005.904 kb on - strand at 3005.920 kb on - strand at 3005.967 kb on + strand at 3005.967 kb on + strand at 3005.967 kb on + strand at 3005.967 kb on + strand at 3005.968 kb on - strand at 3005.968 kb on - strand at 3005.968 kb on - strand at 3005.968 kb on - strand at 3005.968 kb on - strand at 3005.968 kb on - strand at 3005.969 kb on + strand at 3005.970 kb on - strand at 3006.134 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 3,003,654 + A4249_RS14840 0.16 +0.5 3,003,654 + A4249_RS14840 0.16 -1.1 3,003,654 + A4249_RS14840 0.16 -0.7 3,003,654 + A4249_RS14840 0.16 +0.9 3,003,769 + A4249_RS14840 0.26 -0.1 3,003,770 - A4249_RS14840 0.26 +0.6 3,003,885 + A4249_RS14840 0.36 +0.9 3,003,886 - A4249_RS14840 0.36 +0.6 3,004,084 + A4249_RS14840 0.53 +0.0 3,004,170 + A4249_RS14840 0.60 +0.4 3,004,170 + A4249_RS14840 0.60 +0.0 3,004,170 + A4249_RS14840 0.60 +0.4 3,004,171 - A4249_RS14840 0.60 -1.1 3,004,171 - A4249_RS14840 0.60 +0.4 3,004,342 + A4249_RS14840 0.75 -0.6 3,004,342 + A4249_RS14840 0.75 +0.9 3,004,345 - A4249_RS14840 0.75 -1.3 3,004,345 - A4249_RS14840 0.75 +1.4 3,004,345 - A4249_RS14840 0.75 +1.3 3,004,356 + A4249_RS14840 0.76 +0.2 3,004,356 + A4249_RS14840 0.76 -1.0 3,004,356 + A4249_RS14840 0.76 +0.9 3,004,356 + A4249_RS14840 0.76 -0.7 3,004,356 + A4249_RS14840 0.76 +1.0 3,004,357 - A4249_RS14840 0.76 -0.5 3,004,377 + A4249_RS14840 0.78 -0.5 3,004,378 - A4249_RS14840 0.78 +1.4 3,004,378 - A4249_RS14840 0.78 -0.7 3,004,378 - A4249_RS14840 0.78 -1.6 3,004,378 - A4249_RS14840 0.78 -0.5 3,004,406 + A4249_RS14840 0.80 -1.0 3,004,406 + A4249_RS14840 0.80 +2.0 3,004,407 - A4249_RS14840 0.80 -0.2 3,004,434 + A4249_RS14840 0.83 +0.6 3,004,435 - A4249_RS14840 0.83 -0.3 3,004,822 + A4249_RS14845 0.14 +0.6 3,004,823 - A4249_RS14845 0.14 -2.1 3,004,823 - A4249_RS14845 0.14 -0.6 3,004,823 - A4249_RS14845 0.14 -0.1 3,004,823 - A4249_RS14845 0.14 -0.7 3,004,852 + A4249_RS14845 0.17 -0.5 3,004,852 + A4249_RS14845 0.17 +1.5 3,004,852 + A4249_RS14845 0.17 +0.9 3,004,853 - A4249_RS14845 0.17 -1.4 3,004,853 - A4249_RS14845 0.17 +0.9 3,004,853 - A4249_RS14845 0.17 -0.3 3,004,853 - A4249_RS14845 0.17 -0.6 3,004,853 - A4249_RS14845 0.17 +1.0 3,004,885 + A4249_RS14845 0.19 +1.2 3,004,885 + A4249_RS14845 0.19 -0.9 3,004,886 - A4249_RS14845 0.20 -0.1 3,004,886 - A4249_RS14845 0.20 +0.3 3,005,086 + A4249_RS14845 0.36 +0.8 3,005,086 + A4249_RS14845 0.36 +1.9 3,005,086 + A4249_RS14845 0.36 -0.5 3,005,087 - A4249_RS14845 0.36 -2.1 3,005,087 - A4249_RS14845 0.36 +0.1 3,005,087 - A4249_RS14845 0.36 +0.5 3,005,087 - A4249_RS14845 0.36 -2.7 3,005,087 - A4249_RS14845 0.36 +0.5 3,005,087 - A4249_RS14845 0.36 -0.3 3,005,124 - A4249_RS14845 0.39 +0.4 3,005,134 + A4249_RS14845 0.40 +0.0 3,005,167 + A4249_RS14845 0.43 +0.0 3,005,167 + A4249_RS14845 0.43 -2.1 3,005,167 + A4249_RS14845 0.43 -1.1 3,005,167 + A4249_RS14845 0.43 +0.6 3,005,168 - A4249_RS14845 0.43 +0.0 3,005,168 - A4249_RS14845 0.43 +1.4 3,005,168 - A4249_RS14845 0.43 +0.1 3,005,168 - A4249_RS14845 0.43 -0.0 3,005,176 + A4249_RS14845 0.44 +0.3 3,005,176 + A4249_RS14845 0.44 +0.4 3,005,176 + A4249_RS14845 0.44 +0.4 3,005,176 + A4249_RS14845 0.44 +0.3 3,005,176 + A4249_RS14845 0.44 -0.1 3,005,176 + A4249_RS14845 0.44 -0.1 3,005,177 - A4249_RS14845 0.44 +0.0 3,005,177 - A4249_RS14845 0.44 -0.7 3,005,177 - A4249_RS14845 0.44 -0.8 3,005,177 - A4249_RS14845 0.44 -1.0 3,005,177 - A4249_RS14845 0.44 +0.0 3,005,177 - A4249_RS14845 0.44 +0.0 3,005,398 + A4249_RS14845 0.62 +1.0 3,005,398 + A4249_RS14845 0.62 -1.3 3,005,398 + A4249_RS14845 0.62 -0.1 3,005,398 + A4249_RS14845 0.62 -0.7 3,005,399 - A4249_RS14845 0.62 -0.6 3,005,399 - A4249_RS14845 0.62 +0.9 3,005,399 - A4249_RS14845 0.62 -1.0 3,005,399 - A4249_RS14845 0.62 +0.3 3,005,399 - A4249_RS14845 0.62 +0.0 3,005,399 - A4249_RS14845 0.62 +0.1 3,005,399 - A4249_RS14845 0.62 -0.5 3,005,399 - A4249_RS14845 0.62 +0.6 3,005,399 - A4249_RS14845 0.62 +0.7 3,005,399 - A4249_RS14845 0.62 -0.1 3,005,482 + A4249_RS14845 0.69 -0.6 3,005,482 + A4249_RS14845 0.69 +0.2 3,005,483 - A4249_RS14845 0.69 +0.7 3,005,483 - A4249_RS14845 0.69 +0.1 3,005,500 + A4249_RS14845 0.70 -0.9 3,005,500 + A4249_RS14845 0.70 -2.3 3,005,501 - A4249_RS14845 0.71 -0.3 3,005,501 - A4249_RS14845 0.71 +1.5 3,005,501 - A4249_RS14845 0.71 -2.0 3,005,501 - A4249_RS14845 0.71 -1.5 3,005,501 - A4249_RS14845 0.71 +0.0 3,005,501 - A4249_RS14845 0.71 -0.2 3,005,530 + A4249_RS14845 0.73 -0.5 3,005,530 + A4249_RS14845 0.73 +0.4 3,005,530 + A4249_RS14845 0.73 -2.0 3,005,530 + A4249_RS14845 0.73 +0.5 3,005,531 - A4249_RS14845 0.73 -0.1 3,005,531 - A4249_RS14845 0.73 +0.3 3,005,549 - A4249_RS14845 0.75 +0.9 3,005,549 - A4249_RS14845 0.75 -0.4 3,005,586 + A4249_RS14845 0.78 -0.7 3,005,586 + A4249_RS14845 0.78 -0.1 3,005,586 + A4249_RS14845 0.78 -2.1 3,005,587 - A4249_RS14845 0.78 +0.8 3,005,587 - A4249_RS14845 0.78 +1.9 3,005,768 + -0.7 3,005,768 + -0.5 3,005,768 + -1.1 3,005,769 - -0.6 3,005,769 - +0.3 3,005,769 - +0.4 3,005,769 - -1.7 3,005,769 - -1.0 3,005,769 - -0.1 3,005,901 + -0.3 3,005,902 - +0.2 3,005,903 + -0.1 3,005,903 + -0.6 3,005,904 - -0.2 3,005,920 - +0.9 3,005,967 + -1.8 3,005,967 + +0.9 3,005,967 + +0.4 3,005,967 + +0.8 3,005,968 - +0.4 3,005,968 - -0.1 3,005,968 - +0.6 3,005,968 - -0.1 3,005,968 - +0.4 3,005,968 - +0.1 3,005,969 + -0.3 3,005,970 - -0.8 3,006,134 + +0.8
Or see this region's nucleotide sequence