Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14720

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14710 and A4249_RS14715 overlap by 4 nucleotidesA4249_RS14715 and A4249_RS14720 overlap by 1 nucleotidesA4249_RS14720 and A4249_RS14725 are separated by 43 nucleotidesA4249_RS14725 and A4249_RS14730 are separated by 27 nucleotidesA4249_RS14730 and A4249_RS14735 overlap by 4 nucleotides A4249_RS14710: A4249_RS14710 - rRNA maturation RNase YbeY, at 2,980,332 to 2,980,778 _RS14710 A4249_RS14715: A4249_RS14715 - PhoH family protein, at 2,980,775 to 2,981,761 _RS14715 A4249_RS14720: A4249_RS14720 - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 2,981,761 to 2,983,197 _RS14720 A4249_RS14725: A4249_RS14725 - Fur family transcriptional regulator, at 2,983,241 to 2,983,726 _RS14725 A4249_RS14730: A4249_RS14730 - GNAT family N-acetyltransferase, at 2,983,754 to 2,984,197 _RS14730 A4249_RS14735: A4249_RS14735 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB, at 2,984,194 to 2,984,874 _RS14735 Position (kb) 2981 2982 2983 2984Strain fitness (log2 ratio) -2 -1 0 1at 2980.830 kb on + strandat 2980.830 kb on + strandat 2980.831 kb on - strandat 2980.831 kb on - strandat 2980.831 kb on - strandat 2980.831 kb on - strandat 2981.205 kb on + strand, within A4249_RS14715at 2981.325 kb on + strand, within A4249_RS14715at 2981.325 kb on + strand, within A4249_RS14715at 2981.325 kb on + strand, within A4249_RS14715at 2981.326 kb on - strand, within A4249_RS14715at 2981.326 kb on - strand, within A4249_RS14715at 2981.326 kb on - strand, within A4249_RS14715at 2981.406 kb on + strand, within A4249_RS14715at 2981.406 kb on + strand, within A4249_RS14715at 2981.407 kb on - strand, within A4249_RS14715at 2981.407 kb on - strand, within A4249_RS14715at 2981.407 kb on - strand, within A4249_RS14715at 2981.407 kb on - strand, within A4249_RS14715at 2981.516 kb on + strand, within A4249_RS14715at 2981.517 kb on - strand, within A4249_RS14715at 2981.828 kb on - strandat 2981.828 kb on - strandat 2981.828 kb on - strandat 2981.828 kb on - strandat 2981.930 kb on + strand, within A4249_RS14720at 2982.137 kb on + strand, within A4249_RS14720at 2982.161 kb on + strand, within A4249_RS14720at 2982.161 kb on + strand, within A4249_RS14720at 2982.162 kb on - strand, within A4249_RS14720at 2982.162 kb on - strand, within A4249_RS14720at 2982.294 kb on - strand, within A4249_RS14720at 2982.368 kb on + strand, within A4249_RS14720at 2982.441 kb on + strand, within A4249_RS14720at 2982.441 kb on + strand, within A4249_RS14720at 2982.441 kb on + strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.442 kb on - strand, within A4249_RS14720at 2982.482 kb on + strand, within A4249_RS14720at 2982.482 kb on + strand, within A4249_RS14720at 2982.482 kb on + strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.483 kb on - strand, within A4249_RS14720at 2982.533 kb on + strand, within A4249_RS14720at 2982.645 kb on + strand, within A4249_RS14720at 2982.645 kb on + strand, within A4249_RS14720at 2982.645 kb on + strand, within A4249_RS14720at 2982.645 kb on + strand, within A4249_RS14720at 2982.645 kb on + strand, within A4249_RS14720at 2982.646 kb on - strand, within A4249_RS14720at 2982.646 kb on - strand, within A4249_RS14720at 2982.647 kb on + strand, within A4249_RS14720at 2982.648 kb on - strand, within A4249_RS14720at 2982.648 kb on - strand, within A4249_RS14720at 2982.830 kb on + strand, within A4249_RS14720at 2982.830 kb on + strand, within A4249_RS14720at 2982.830 kb on + strand, within A4249_RS14720at 2982.830 kb on + strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.831 kb on - strand, within A4249_RS14720at 2982.986 kb on + strand, within A4249_RS14720at 2982.986 kb on + strand, within A4249_RS14720at 2982.986 kb on + strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2982.987 kb on - strand, within A4249_RS14720at 2983.071 kb on - strandat 2983.071 kb on - strandat 2983.107 kb on + strandat 2983.108 kb on - strandat 2983.108 kb on - strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.112 kb on + strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.113 kb on - strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.133 kb on + strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.134 kb on - strandat 2983.206 kb on + strandat 2983.206 kb on + strandat 2983.207 kb on - strandat 2983.207 kb on - strandat 2983.207 kb on - strandat 2983.207 kb on - strandat 2983.733 kb on - strandat 2983.839 kb on + strand, within A4249_RS14730at 2983.839 kb on + strand, within A4249_RS14730at 2983.839 kb on + strand, within A4249_RS14730at 2983.839 kb on + strand, within A4249_RS14730at 2983.840 kb on - strand, within A4249_RS14730at 2983.840 kb on - strand, within A4249_RS14730at 2983.840 kb on - strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.842 kb on + strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.843 kb on - strand, within A4249_RS14730at 2983.884 kb on + strand, within A4249_RS14730at 2983.884 kb on + strand, within A4249_RS14730at 2983.884 kb on + strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2983.885 kb on - strand, within A4249_RS14730at 2984.093 kb on + strand, within A4249_RS14730

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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2,980,830 + -1.3
2,980,830 + +0.7
2,980,831 - +0.1
2,980,831 - +0.1
2,980,831 - +0.9
2,980,831 - +0.4
2,981,205 + A4249_RS14715 0.44 +1.3
2,981,325 + A4249_RS14715 0.56 -0.9
2,981,325 + A4249_RS14715 0.56 -0.7
2,981,325 + A4249_RS14715 0.56 -0.1
2,981,326 - A4249_RS14715 0.56 +0.3
2,981,326 - A4249_RS14715 0.56 -1.1
2,981,326 - A4249_RS14715 0.56 +0.2
2,981,406 + A4249_RS14715 0.64 -0.0
2,981,406 + A4249_RS14715 0.64 -0.2
2,981,407 - A4249_RS14715 0.64 +0.3
2,981,407 - A4249_RS14715 0.64 +0.0
2,981,407 - A4249_RS14715 0.64 +0.1
2,981,407 - A4249_RS14715 0.64 +0.5
2,981,516 + A4249_RS14715 0.75 +1.3
2,981,517 - A4249_RS14715 0.75 -0.2
2,981,828 - +0.0
2,981,828 - -0.3
2,981,828 - +0.4
2,981,828 - -0.1
2,981,930 + A4249_RS14720 0.12 +0.9
2,982,137 + A4249_RS14720 0.26 -0.9
2,982,161 + A4249_RS14720 0.28 +0.0
2,982,161 + A4249_RS14720 0.28 -0.1
2,982,162 - A4249_RS14720 0.28 +0.3
2,982,162 - A4249_RS14720 0.28 -0.2
2,982,294 - A4249_RS14720 0.37 -0.8
2,982,368 + A4249_RS14720 0.42 -0.4
2,982,441 + A4249_RS14720 0.47 -0.0
2,982,441 + A4249_RS14720 0.47 +0.1
2,982,441 + A4249_RS14720 0.47 -1.5
2,982,442 - A4249_RS14720 0.47 -1.4
2,982,442 - A4249_RS14720 0.47 -0.1
2,982,442 - A4249_RS14720 0.47 +0.4
2,982,442 - A4249_RS14720 0.47 -2.0
2,982,442 - A4249_RS14720 0.47 +0.3
2,982,442 - A4249_RS14720 0.47 -0.3
2,982,442 - A4249_RS14720 0.47 +0.1
2,982,442 - A4249_RS14720 0.47 +0.9
2,982,442 - A4249_RS14720 0.47 -0.0
2,982,442 - A4249_RS14720 0.47 -1.7
2,982,482 + A4249_RS14720 0.50 -0.9
2,982,482 + A4249_RS14720 0.50 +0.3
2,982,482 + A4249_RS14720 0.50 +0.3
2,982,483 - A4249_RS14720 0.50 +0.1
2,982,483 - A4249_RS14720 0.50 -0.3
2,982,483 - A4249_RS14720 0.50 -1.8
2,982,483 - A4249_RS14720 0.50 +0.0
2,982,483 - A4249_RS14720 0.50 -0.7
2,982,483 - A4249_RS14720 0.50 -0.4
2,982,483 - A4249_RS14720 0.50 -1.1
2,982,483 - A4249_RS14720 0.50 +0.1
2,982,533 + A4249_RS14720 0.54 +0.5
2,982,645 + A4249_RS14720 0.62 +0.2
2,982,645 + A4249_RS14720 0.62 -1.4
2,982,645 + A4249_RS14720 0.62 -0.4
2,982,645 + A4249_RS14720 0.62 -0.0
2,982,645 + A4249_RS14720 0.62 -0.5
2,982,646 - A4249_RS14720 0.62 +0.2
2,982,646 - A4249_RS14720 0.62 -0.1
2,982,647 + A4249_RS14720 0.62 +0.5
2,982,648 - A4249_RS14720 0.62 -2.0
2,982,648 - A4249_RS14720 0.62 -1.6
2,982,830 + A4249_RS14720 0.74 -0.1
2,982,830 + A4249_RS14720 0.74 +0.0
2,982,830 + A4249_RS14720 0.74 -1.4
2,982,830 + A4249_RS14720 0.74 -0.5
2,982,831 - A4249_RS14720 0.74 -0.6
2,982,831 - A4249_RS14720 0.74 -2.2
2,982,831 - A4249_RS14720 0.74 -0.5
2,982,831 - A4249_RS14720 0.74 -0.6
2,982,831 - A4249_RS14720 0.74 -0.6
2,982,986 + A4249_RS14720 0.85 -0.3
2,982,986 + A4249_RS14720 0.85 +0.9
2,982,986 + A4249_RS14720 0.85 -1.3
2,982,987 - A4249_RS14720 0.85 -0.1
2,982,987 - A4249_RS14720 0.85 -1.5
2,982,987 - A4249_RS14720 0.85 +1.3
2,982,987 - A4249_RS14720 0.85 -0.9
2,983,071 - -0.2
2,983,071 - +0.5
2,983,107 + -1.1
2,983,108 - +0.2
2,983,108 - -0.6
2,983,112 + -0.5
2,983,112 + +0.1
2,983,112 + +0.2
2,983,112 + -1.6
2,983,112 + +0.1
2,983,112 + +1.0
2,983,112 + -0.3
2,983,112 + -0.6
2,983,112 + -0.7
2,983,112 + -1.2
2,983,112 + -1.3
2,983,113 - -0.1
2,983,113 - +0.5
2,983,113 - -1.0
2,983,113 - +0.2
2,983,113 - -1.3
2,983,113 - -0.6
2,983,113 - +0.3
2,983,133 + +0.3
2,983,133 + -0.2
2,983,133 + -0.5
2,983,133 + -0.3
2,983,133 + -1.9
2,983,134 - -0.1
2,983,134 - +1.4
2,983,134 - +0.6
2,983,134 - +0.6
2,983,134 - -0.2
2,983,206 + +0.0
2,983,206 + +0.7
2,983,207 - +0.9
2,983,207 - +1.5
2,983,207 - -0.2
2,983,207 - +0.1
2,983,733 - +0.5
2,983,839 + A4249_RS14730 0.19 -1.2
2,983,839 + A4249_RS14730 0.19 +0.5
2,983,839 + A4249_RS14730 0.19 +1.3
2,983,839 + A4249_RS14730 0.19 -0.7
2,983,840 - A4249_RS14730 0.19 -1.0
2,983,840 - A4249_RS14730 0.19 +0.1
2,983,840 - A4249_RS14730 0.19 -0.4
2,983,842 + A4249_RS14730 0.20 -1.1
2,983,842 + A4249_RS14730 0.20 +0.1
2,983,842 + A4249_RS14730 0.20 -0.4
2,983,842 + A4249_RS14730 0.20 +0.6
2,983,842 + A4249_RS14730 0.20 -1.5
2,983,842 + A4249_RS14730 0.20 -0.1
2,983,843 - A4249_RS14730 0.20 +0.4
2,983,843 - A4249_RS14730 0.20 +0.3
2,983,843 - A4249_RS14730 0.20 +0.1
2,983,843 - A4249_RS14730 0.20 -0.5
2,983,884 + A4249_RS14730 0.29 +0.2
2,983,884 + A4249_RS14730 0.29 +1.3
2,983,884 + A4249_RS14730 0.29 +1.3
2,983,885 - A4249_RS14730 0.30 -1.2
2,983,885 - A4249_RS14730 0.30 +0.3
2,983,885 - A4249_RS14730 0.30 +1.3
2,983,885 - A4249_RS14730 0.30 +0.0
2,983,885 - A4249_RS14730 0.30 -0.5
2,984,093 + A4249_RS14730 0.76 +0.3

Or see this region's nucleotide sequence