Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14510

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14505 and A4249_RS14510 are separated by 18 nucleotidesA4249_RS14510 and A4249_RS14515 are separated by 59 nucleotidesA4249_RS14515 and A4249_RS14520 are separated by 48 nucleotides A4249_RS14505: A4249_RS14505 - bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase, at 2,936,940 to 2,937,818 _RS14505 A4249_RS14510: A4249_RS14510 - hypothetical protein, at 2,937,837 to 2,938,280 _RS14510 A4249_RS14515: A4249_RS14515 - enoyl-CoA hydratase-related protein, at 2,938,340 to 2,939,128 _RS14515 A4249_RS14520: A4249_RS14520 - alpha/beta hydrolase, at 2,939,177 to 2,940,067 _RS14520 Position (kb) 2937 2938 2939Strain fitness (log2 ratio) -1 0 1 2 3at 2936.846 kb on + strandat 2936.846 kb on + strandat 2936.846 kb on + strandat 2936.846 kb on + strandat 2936.847 kb on - strandat 2936.847 kb on - strandat 2936.847 kb on - strandat 2936.928 kb on + strandat 2936.929 kb on - strandat 2937.098 kb on - strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.114 kb on + strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.115 kb on - strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.491 kb on + strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.492 kb on - strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.495 kb on + strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.496 kb on - strand, within A4249_RS14505at 2937.593 kb on + strand, within A4249_RS14505at 2937.593 kb on + strand, within A4249_RS14505at 2937.594 kb on - strand, within A4249_RS14505at 2937.669 kb on + strand, within A4249_RS14505at 2937.669 kb on + strand, within A4249_RS14505at 2937.670 kb on - strand, within A4249_RS14505at 2937.693 kb on + strand, within A4249_RS14505at 2937.694 kb on - strand, within A4249_RS14505at 2937.694 kb on - strand, within A4249_RS14505at 2937.694 kb on - strand, within A4249_RS14505at 2937.792 kb on + strandat 2937.792 kb on + strandat 2937.792 kb on + strandat 2937.792 kb on + strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.793 kb on - strandat 2937.894 kb on + strand, within A4249_RS14510at 2937.894 kb on + strand, within A4249_RS14510at 2937.894 kb on + strand, within A4249_RS14510at 2937.895 kb on - strand, within A4249_RS14510at 2938.279 kb on - strandat 2938.313 kb on + strandat 2938.313 kb on + strandat 2938.313 kb on + strandat 2938.313 kb on + strandat 2938.313 kb on + strandat 2938.314 kb on - strandat 2938.314 kb on - strandat 2938.314 kb on - strandat 2938.352 kb on + strandat 2938.352 kb on + strandat 2938.352 kb on + strandat 2938.353 kb on - strandat 2938.389 kb on - strandat 2938.574 kb on + strand, within A4249_RS14515at 2938.574 kb on + strand, within A4249_RS14515at 2938.574 kb on + strand, within A4249_RS14515at 2938.574 kb on + strand, within A4249_RS14515at 2938.575 kb on - strand, within A4249_RS14515at 2938.575 kb on - strand, within A4249_RS14515at 2938.575 kb on - strand, within A4249_RS14515at 2938.575 kb on - strand, within A4249_RS14515at 2938.575 kb on - strand, within A4249_RS14515at 2938.586 kb on + strand, within A4249_RS14515at 2938.586 kb on + strand, within A4249_RS14515at 2938.586 kb on + strand, within A4249_RS14515at 2938.586 kb on + strand, within A4249_RS14515at 2938.587 kb on - strand, within A4249_RS14515at 2938.587 kb on - strand, within A4249_RS14515at 2938.587 kb on - strand, within A4249_RS14515at 2938.587 kb on - strand, within A4249_RS14515at 2938.598 kb on + strand, within A4249_RS14515at 2938.598 kb on + strand, within A4249_RS14515at 2938.599 kb on - strand, within A4249_RS14515at 2938.599 kb on - strand, within A4249_RS14515at 2938.599 kb on - strand, within A4249_RS14515at 2938.599 kb on - strand, within A4249_RS14515at 2939.126 kb on + strandat 2939.126 kb on + strandat 2939.126 kb on + strandat 2939.127 kb on - strandat 2939.127 kb on - strandat 2939.127 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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2,936,846 + -0.1
2,936,846 + +0.3
2,936,846 + -0.5
2,936,846 + +0.0
2,936,847 - -0.0
2,936,847 - -0.1
2,936,847 - -0.3
2,936,928 + +0.6
2,936,929 - +0.3
2,937,098 - A4249_RS14505 0.18 -0.6
2,937,114 + A4249_RS14505 0.20 -0.4
2,937,114 + A4249_RS14505 0.20 -0.0
2,937,114 + A4249_RS14505 0.20 +0.6
2,937,114 + A4249_RS14505 0.20 -1.5
2,937,114 + A4249_RS14505 0.20 -0.2
2,937,114 + A4249_RS14505 0.20 +0.2
2,937,115 - A4249_RS14505 0.20 +0.0
2,937,115 - A4249_RS14505 0.20 +0.3
2,937,115 - A4249_RS14505 0.20 +0.4
2,937,115 - A4249_RS14505 0.20 +0.5
2,937,491 + A4249_RS14505 0.63 -0.5
2,937,491 + A4249_RS14505 0.63 -1.7
2,937,491 + A4249_RS14505 0.63 +0.5
2,937,491 + A4249_RS14505 0.63 -0.4
2,937,491 + A4249_RS14505 0.63 -0.7
2,937,491 + A4249_RS14505 0.63 +0.2
2,937,491 + A4249_RS14505 0.63 -0.5
2,937,491 + A4249_RS14505 0.63 -1.7
2,937,491 + A4249_RS14505 0.63 -0.6
2,937,491 + A4249_RS14505 0.63 -0.7
2,937,491 + A4249_RS14505 0.63 +0.7
2,937,491 + A4249_RS14505 0.63 +0.3
2,937,491 + A4249_RS14505 0.63 -0.8
2,937,492 - A4249_RS14505 0.63 -1.1
2,937,492 - A4249_RS14505 0.63 +1.3
2,937,492 - A4249_RS14505 0.63 -0.7
2,937,492 - A4249_RS14505 0.63 +1.2
2,937,492 - A4249_RS14505 0.63 +0.6
2,937,492 - A4249_RS14505 0.63 -1.0
2,937,492 - A4249_RS14505 0.63 +0.9
2,937,492 - A4249_RS14505 0.63 -1.3
2,937,492 - A4249_RS14505 0.63 +0.1
2,937,492 - A4249_RS14505 0.63 -0.8
2,937,492 - A4249_RS14505 0.63 -0.3
2,937,492 - A4249_RS14505 0.63 -1.1
2,937,495 + A4249_RS14505 0.63 +0.7
2,937,495 + A4249_RS14505 0.63 +0.1
2,937,495 + A4249_RS14505 0.63 +0.6
2,937,495 + A4249_RS14505 0.63 -0.0
2,937,495 + A4249_RS14505 0.63 +0.0
2,937,495 + A4249_RS14505 0.63 -0.5
2,937,495 + A4249_RS14505 0.63 -1.0
2,937,495 + A4249_RS14505 0.63 +0.1
2,937,495 + A4249_RS14505 0.63 -0.6
2,937,495 + A4249_RS14505 0.63 +0.5
2,937,495 + A4249_RS14505 0.63 +0.2
2,937,495 + A4249_RS14505 0.63 +0.0
2,937,496 - A4249_RS14505 0.63 -0.3
2,937,496 - A4249_RS14505 0.63 +1.3
2,937,496 - A4249_RS14505 0.63 +3.2
2,937,496 - A4249_RS14505 0.63 -0.4
2,937,496 - A4249_RS14505 0.63 -0.8
2,937,496 - A4249_RS14505 0.63 -0.7
2,937,496 - A4249_RS14505 0.63 +0.2
2,937,496 - A4249_RS14505 0.63 +0.5
2,937,496 - A4249_RS14505 0.63 -0.0
2,937,496 - A4249_RS14505 0.63 +0.4
2,937,496 - A4249_RS14505 0.63 +0.2
2,937,496 - A4249_RS14505 0.63 -1.1
2,937,496 - A4249_RS14505 0.63 -0.1
2,937,496 - A4249_RS14505 0.63 -1.5
2,937,593 + A4249_RS14505 0.74 -0.3
2,937,593 + A4249_RS14505 0.74 +0.9
2,937,594 - A4249_RS14505 0.74 -0.6
2,937,669 + A4249_RS14505 0.83 +2.4
2,937,669 + A4249_RS14505 0.83 -0.7
2,937,670 - A4249_RS14505 0.83 -0.4
2,937,693 + A4249_RS14505 0.86 -0.0
2,937,694 - A4249_RS14505 0.86 -0.1
2,937,694 - A4249_RS14505 0.86 -0.5
2,937,694 - A4249_RS14505 0.86 -1.2
2,937,792 + +0.6
2,937,792 + +0.9
2,937,792 + +0.4
2,937,792 + -1.6
2,937,793 - +0.6
2,937,793 - +0.6
2,937,793 - -0.1
2,937,793 - -0.3
2,937,793 - -0.0
2,937,793 - -1.1
2,937,894 + A4249_RS14510 0.13 -0.4
2,937,894 + A4249_RS14510 0.13 +0.4
2,937,894 + A4249_RS14510 0.13 -1.3
2,937,895 - A4249_RS14510 0.13 +0.5
2,938,279 - -0.1
2,938,313 + -1.3
2,938,313 + +0.1
2,938,313 + +0.9
2,938,313 + -0.2
2,938,313 + -0.9
2,938,314 - +0.9
2,938,314 - +0.1
2,938,314 - +0.9
2,938,352 + -0.2
2,938,352 + +0.1
2,938,352 + -0.3
2,938,353 - -0.0
2,938,389 - -0.3
2,938,574 + A4249_RS14515 0.30 -1.0
2,938,574 + A4249_RS14515 0.30 -0.2
2,938,574 + A4249_RS14515 0.30 -0.1
2,938,574 + A4249_RS14515 0.30 -0.1
2,938,575 - A4249_RS14515 0.30 -0.2
2,938,575 - A4249_RS14515 0.30 +0.1
2,938,575 - A4249_RS14515 0.30 -0.0
2,938,575 - A4249_RS14515 0.30 -0.2
2,938,575 - A4249_RS14515 0.30 -0.3
2,938,586 + A4249_RS14515 0.31 -0.2
2,938,586 + A4249_RS14515 0.31 -0.0
2,938,586 + A4249_RS14515 0.31 -0.1
2,938,586 + A4249_RS14515 0.31 -0.1
2,938,587 - A4249_RS14515 0.31 -0.3
2,938,587 - A4249_RS14515 0.31 +0.1
2,938,587 - A4249_RS14515 0.31 -0.4
2,938,587 - A4249_RS14515 0.31 +0.1
2,938,598 + A4249_RS14515 0.33 +0.2
2,938,598 + A4249_RS14515 0.33 -0.2
2,938,599 - A4249_RS14515 0.33 -0.2
2,938,599 - A4249_RS14515 0.33 -0.3
2,938,599 - A4249_RS14515 0.33 -0.3
2,938,599 - A4249_RS14515 0.33 -0.2
2,939,126 + -0.4
2,939,126 + +0.2
2,939,126 + -0.5
2,939,127 - -1.0
2,939,127 - -1.6
2,939,127 - -0.0

Or see this region's nucleotide sequence