Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13115 and A4249_RS13120 overlap by 4 nucleotides A4249_RS13120 and A4249_RS13125 are separated by 64 nucleotides A4249_RS13125 and A4249_RS13130 are separated by 66 nucleotides
A4249_RS13115: A4249_RS13115 - phosphoglucosamine mutase, at 2,639,542 to 2,639,787
_RS13115
A4249_RS13120: A4249_RS13120 - hypothetical protein, at 2,639,784 to 2,640,245
_RS13120
A4249_RS13125: A4249_RS13125 - ribonuclease PH, at 2,640,310 to 2,641,035
_RS13125
A4249_RS13130: A4249_RS13130 - heat-inducible transcriptional repressor HrcA, at 2,641,102 to 2,642,196
_RS13130
Position (kb)
2640
2641
2642 Strain fitness (log2 ratio)
-2
-1
0
1 at 2639.390 kb on + strand at 2639.390 kb on + strand at 2639.390 kb on + strand at 2639.391 kb on - strand at 2639.393 kb on + strand at 2639.393 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.516 kb on + strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.517 kb on - strand at 2639.775 kb on - strand at 2639.785 kb on + strand at 2640.311 kb on + strand at 2640.507 kb on - strand, within A4249_RS13125 at 2640.608 kb on + strand, within A4249_RS13125 at 2640.608 kb on + strand, within A4249_RS13125 at 2640.608 kb on + strand, within A4249_RS13125 at 2640.609 kb on - strand, within A4249_RS13125 at 2640.609 kb on - strand, within A4249_RS13125 at 2640.609 kb on - strand, within A4249_RS13125 at 2640.848 kb on + strand, within A4249_RS13125 at 2640.849 kb on - strand, within A4249_RS13125 at 2641.084 kb on + strand at 2641.084 kb on + strand at 2641.084 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.105 kb on + strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.106 kb on - strand at 2641.207 kb on + strand at 2641.207 kb on + strand at 2641.207 kb on + strand at 2641.208 kb on - strand at 2641.208 kb on - strand at 2641.410 kb on + strand, within A4249_RS13130 at 2641.410 kb on + strand, within A4249_RS13130 at 2641.410 kb on + strand, within A4249_RS13130 at 2641.410 kb on + strand, within A4249_RS13130 at 2641.411 kb on - strand, within A4249_RS13130 at 2641.411 kb on - strand, within A4249_RS13130
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,639,390 + +0.3 2,639,390 + -0.5 2,639,390 + +0.4 2,639,391 - -1.3 2,639,393 + +1.5 2,639,393 + +0.6 2,639,516 + -0.7 2,639,516 + -0.6 2,639,516 + +0.2 2,639,516 + +0.9 2,639,516 + -0.5 2,639,516 + +0.1 2,639,516 + +0.7 2,639,516 + +0.2 2,639,516 + -0.5 2,639,517 - +0.1 2,639,517 - +1.0 2,639,517 - +0.0 2,639,517 - -1.1 2,639,517 - +1.5 2,639,517 - -0.1 2,639,517 - -0.5 2,639,517 - -1.7 2,639,517 - -0.1 2,639,517 - +1.0 2,639,517 - +0.3 2,639,775 - -0.2 2,639,785 + +0.5 2,640,311 + -0.0 2,640,507 - A4249_RS13125 0.27 +0.3 2,640,608 + A4249_RS13125 0.41 -0.4 2,640,608 + A4249_RS13125 0.41 -0.0 2,640,608 + A4249_RS13125 0.41 +0.2 2,640,609 - A4249_RS13125 0.41 -0.4 2,640,609 - A4249_RS13125 0.41 -0.0 2,640,609 - A4249_RS13125 0.41 +0.4 2,640,848 + A4249_RS13125 0.74 +1.7 2,640,849 - A4249_RS13125 0.74 -0.6 2,641,084 + -0.2 2,641,084 + +0.1 2,641,084 + +0.1 2,641,105 + -1.0 2,641,105 + +0.8 2,641,105 + +0.5 2,641,105 + +0.3 2,641,105 + -0.4 2,641,106 - -0.5 2,641,106 - -0.0 2,641,106 - -0.6 2,641,106 - -0.8 2,641,106 - -0.1 2,641,207 + -0.6 2,641,207 + +0.7 2,641,207 + +0.2 2,641,208 - -0.0 2,641,208 - -1.0 2,641,410 + A4249_RS13130 0.28 -0.4 2,641,410 + A4249_RS13130 0.28 -2.1 2,641,410 + A4249_RS13130 0.28 +0.9 2,641,410 + A4249_RS13130 0.28 -0.0 2,641,411 - A4249_RS13130 0.28 +0.2 2,641,411 - A4249_RS13130 0.28 +0.9
Or see this region's nucleotide sequence