Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12185 and A4249_RS12190 are separated by 135 nucleotides A4249_RS12190 and A4249_RS12195 are separated by 4 nucleotides A4249_RS12195 and A4249_RS12200 are separated by 30 nucleotides A4249_RS12200 and A4249_RS12205 are separated by 37 nucleotides
A4249_RS12185: A4249_RS12185 - adenosylhomocysteinase, at 2,447,391 to 2,448,782
_RS12185
A4249_RS12190: A4249_RS12190 - Tat pathway signal protein, at 2,448,918 to 2,449,313
_RS12190
A4249_RS12195: A4249_RS12195 - primosomal protein N', at 2,449,318 to 2,451,495
_RS12195
A4249_RS12200: A4249_RS12200 - fructose-6-phosphate aldolase, at 2,451,526 to 2,452,179
_RS12200
A4249_RS12205: A4249_RS12205 - DUF484 family protein, at 2,452,217 to 2,452,930
_RS12205
Position (kb)
2449
2450
2451
2452 Strain fitness (log2 ratio)
-2
-1
0
1 at 2448.840 kb on - strand at 2448.840 kb on - strand at 2448.853 kb on + strand at 2448.854 kb on - strand at 2448.854 kb on - strand at 2448.854 kb on - strand at 2448.854 kb on - strand at 2448.859 kb on + strand at 2448.866 kb on - strand at 2448.891 kb on + strand at 2448.891 kb on + strand at 2448.891 kb on + strand at 2448.891 kb on + strand at 2448.892 kb on - strand at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.017 kb on + strand, within A4249_RS12190 at 2449.018 kb on - strand, within A4249_RS12190 at 2449.018 kb on - strand, within A4249_RS12190 at 2449.018 kb on - strand, within A4249_RS12190 at 2449.018 kb on - strand, within A4249_RS12190 at 2449.018 kb on - strand, within A4249_RS12190 at 2449.018 kb on - strand, within A4249_RS12190 at 2449.161 kb on + strand, within A4249_RS12190 at 2449.162 kb on - strand, within A4249_RS12190 at 2449.162 kb on - strand, within A4249_RS12190 at 2449.162 kb on - strand, within A4249_RS12190 at 2449.162 kb on - strand, within A4249_RS12190 at 2449.331 kb on + strand at 2451.513 kb on + strand at 2451.514 kb on - strand at 2451.514 kb on - strand at 2451.923 kb on + strand, within A4249_RS12200 at 2451.923 kb on + strand, within A4249_RS12200 at 2451.923 kb on + strand, within A4249_RS12200 at 2451.923 kb on + strand, within A4249_RS12200 at 2451.924 kb on - strand, within A4249_RS12200 at 2451.924 kb on - strand, within A4249_RS12200 at 2451.924 kb on - strand, within A4249_RS12200 at 2451.925 kb on - strand, within A4249_RS12200 at 2451.976 kb on + strand, within A4249_RS12200 at 2451.977 kb on - strand, within A4249_RS12200 at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.170 kb on + strand at 2452.171 kb on - strand at 2452.171 kb on - strand at 2452.171 kb on - strand at 2452.171 kb on - strand at 2452.171 kb on - strand at 2452.171 kb on - strand at 2452.177 kb on + strand at 2452.178 kb on - strand at 2452.178 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,448,840 - +1.2 2,448,840 - -0.1 2,448,853 + -1.0 2,448,854 - +0.2 2,448,854 - -0.0 2,448,854 - -0.3 2,448,854 - +0.1 2,448,859 + +0.9 2,448,866 - -0.4 2,448,891 + -0.3 2,448,891 + +0.7 2,448,891 + +0.6 2,448,891 + +0.2 2,448,892 - +0.7 2,449,017 + A4249_RS12190 0.25 +0.0 2,449,017 + A4249_RS12190 0.25 -0.5 2,449,017 + A4249_RS12190 0.25 -0.4 2,449,017 + A4249_RS12190 0.25 -2.4 2,449,017 + A4249_RS12190 0.25 -0.1 2,449,017 + A4249_RS12190 0.25 -0.2 2,449,017 + A4249_RS12190 0.25 -0.0 2,449,017 + A4249_RS12190 0.25 -0.0 2,449,017 + A4249_RS12190 0.25 -0.2 2,449,017 + A4249_RS12190 0.25 +0.2 2,449,017 + A4249_RS12190 0.25 +0.5 2,449,017 + A4249_RS12190 0.25 -0.7 2,449,017 + A4249_RS12190 0.25 +0.1 2,449,017 + A4249_RS12190 0.25 +0.2 2,449,017 + A4249_RS12190 0.25 +0.5 2,449,017 + A4249_RS12190 0.25 +0.4 2,449,017 + A4249_RS12190 0.25 -0.4 2,449,017 + A4249_RS12190 0.25 +0.0 2,449,018 - A4249_RS12190 0.25 +0.7 2,449,018 - A4249_RS12190 0.25 -0.1 2,449,018 - A4249_RS12190 0.25 -0.2 2,449,018 - A4249_RS12190 0.25 -0.4 2,449,018 - A4249_RS12190 0.25 -0.8 2,449,018 - A4249_RS12190 0.25 -0.0 2,449,161 + A4249_RS12190 0.61 -0.1 2,449,162 - A4249_RS12190 0.62 +0.2 2,449,162 - A4249_RS12190 0.62 +0.2 2,449,162 - A4249_RS12190 0.62 -0.3 2,449,162 - A4249_RS12190 0.62 +0.1 2,449,331 + -0.6 2,451,513 + -0.2 2,451,514 - +0.2 2,451,514 - +0.4 2,451,923 + A4249_RS12200 0.61 +0.5 2,451,923 + A4249_RS12200 0.61 -0.2 2,451,923 + A4249_RS12200 0.61 -0.5 2,451,923 + A4249_RS12200 0.61 +0.0 2,451,924 - A4249_RS12200 0.61 +0.2 2,451,924 - A4249_RS12200 0.61 -0.5 2,451,924 - A4249_RS12200 0.61 -0.3 2,451,925 - A4249_RS12200 0.61 +1.0 2,451,976 + A4249_RS12200 0.69 +0.2 2,451,977 - A4249_RS12200 0.69 -0.6 2,452,170 + +0.3 2,452,170 + +0.1 2,452,170 + -0.2 2,452,170 + +0.4 2,452,170 + -0.1 2,452,170 + -0.4 2,452,170 + -0.7 2,452,170 + +0.2 2,452,170 + -0.4 2,452,171 - +1.0 2,452,171 - +0.6 2,452,171 - +1.4 2,452,171 - -1.3 2,452,171 - -0.3 2,452,171 - -0.3 2,452,177 + -0.3 2,452,178 - +0.1 2,452,178 - +0.2
Or see this region's nucleotide sequence