Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11375 and A4249_RS11380 are separated by 44 nucleotides A4249_RS11380 and A4249_RS11385 overlap by 20 nucleotides A4249_RS11385 and A4249_RS11390 are separated by 173 nucleotides A4249_RS11390 and A4249_RS11395 are separated by 116 nucleotides
A4249_RS11375: A4249_RS11375 - tRNA epoxyqueuosine(34) reductase QueG, at 2,291,561 to 2,292,670
_RS11375
A4249_RS11380: A4249_RS11380 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 2,292,715 to 2,293,230
_RS11380
A4249_RS11385: A4249_RS11385 - threonine ammonia-lyase, at 2,293,211 to 2,294,413
_RS11385
A4249_RS11390: A4249_RS11390 - hypothetical protein, at 2,294,587 to 2,295,102
_RS11390
A4249_RS11395: A4249_RS11395 - hypothetical protein, at 2,295,219 to 2,295,416
_RS11395
Position (kb)
2293
2294
2295 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.272 kb on + strand, within A4249_RS11375 at 2292.273 kb on - strand, within A4249_RS11375 at 2292.273 kb on - strand, within A4249_RS11375 at 2292.273 kb on - strand, within A4249_RS11375 at 2292.273 kb on - strand, within A4249_RS11375 at 2292.273 kb on - strand, within A4249_RS11375 at 2292.476 kb on + strand, within A4249_RS11375 at 2292.476 kb on + strand, within A4249_RS11375 at 2292.477 kb on - strand, within A4249_RS11375 at 2292.477 kb on - strand, within A4249_RS11375 at 2292.477 kb on - strand, within A4249_RS11375 at 2292.640 kb on + strand at 2292.641 kb on - strand at 2292.641 kb on - strand at 2292.641 kb on - strand at 2292.641 kb on - strand at 2292.641 kb on - strand at 2292.648 kb on + strand at 2292.649 kb on - strand at 2292.649 kb on - strand at 2292.675 kb on + strand at 2292.675 kb on + strand at 2292.676 kb on - strand at 2292.819 kb on + strand, within A4249_RS11380 at 2292.819 kb on + strand, within A4249_RS11380 at 2292.820 kb on - strand, within A4249_RS11380 at 2292.834 kb on - strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.854 kb on + strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.855 kb on - strand, within A4249_RS11380 at 2292.968 kb on - strand, within A4249_RS11380 at 2292.995 kb on + strand, within A4249_RS11380 at 2292.995 kb on + strand, within A4249_RS11380 at 2292.996 kb on - strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.064 kb on + strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.065 kb on - strand, within A4249_RS11380 at 2293.435 kb on - strand, within A4249_RS11385 at 2293.435 kb on - strand, within A4249_RS11385 at 2293.554 kb on + strand, within A4249_RS11385 at 2293.611 kb on + strand, within A4249_RS11385 at 2293.611 kb on + strand, within A4249_RS11385 at 2293.612 kb on - strand, within A4249_RS11385 at 2293.612 kb on - strand, within A4249_RS11385 at 2293.612 kb on - strand, within A4249_RS11385 at 2293.612 kb on - strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.620 kb on + strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.621 kb on - strand, within A4249_RS11385 at 2293.795 kb on - strand, within A4249_RS11385 at 2293.992 kb on + strand, within A4249_RS11385 at 2293.992 kb on + strand, within A4249_RS11385 at 2293.992 kb on + strand, within A4249_RS11385 at 2293.993 kb on - strand, within A4249_RS11385 at 2293.993 kb on - strand, within A4249_RS11385 at 2293.993 kb on - strand, within A4249_RS11385 at 2293.993 kb on - strand, within A4249_RS11385 at 2293.993 kb on - strand, within A4249_RS11385 at 2293.993 kb on - strand, within A4249_RS11385 at 2293.993 kb on - strand, within A4249_RS11385 at 2294.157 kb on + strand, within A4249_RS11385 at 2294.157 kb on + strand, within A4249_RS11385 at 2294.157 kb on + strand, within A4249_RS11385 at 2294.157 kb on + strand, within A4249_RS11385 at 2294.338 kb on - strand at 2294.413 kb on + strand at 2294.413 kb on + strand at 2294.539 kb on + strand at 2294.830 kb on + strand, within A4249_RS11390 at 2294.830 kb on + strand, within A4249_RS11390 at 2294.830 kb on + strand, within A4249_RS11390 at 2294.858 kb on - strand, within A4249_RS11390 at 2294.858 kb on - strand, within A4249_RS11390 at 2294.932 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.941 kb on + strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.942 kb on - strand, within A4249_RS11390 at 2294.991 kb on - strand, within A4249_RS11390 at 2295.238 kb on + strand at 2295.238 kb on + strand at 2295.238 kb on + strand at 2295.238 kb on + strand at 2295.238 kb on + strand at 2295.238 kb on + strand at 2295.238 kb on + strand at 2295.239 kb on - strand, within A4249_RS11395 at 2295.239 kb on - strand, within A4249_RS11395 at 2295.239 kb on - strand, within A4249_RS11395 at 2295.239 kb on - strand, within A4249_RS11395 at 2295.239 kb on - strand, within A4249_RS11395 at 2295.254 kb on + strand, within A4249_RS11395 at 2295.254 kb on + strand, within A4249_RS11395 at 2295.255 kb on - strand, within A4249_RS11395 at 2295.255 kb on - strand, within A4249_RS11395 at 2295.285 kb on + strand, within A4249_RS11395 at 2295.390 kb on + strand, within A4249_RS11395 at 2295.390 kb on + strand, within A4249_RS11395 at 2295.391 kb on - strand, within A4249_RS11395 at 2295.391 kb on - strand, within A4249_RS11395 at 2295.391 kb on - strand, within A4249_RS11395 at 2295.391 kb on - strand, within A4249_RS11395
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,292,272 + A4249_RS11375 0.64 +1.6 2,292,272 + A4249_RS11375 0.64 +0.3 2,292,272 + A4249_RS11375 0.64 -1.0 2,292,272 + A4249_RS11375 0.64 -0.2 2,292,272 + A4249_RS11375 0.64 +0.0 2,292,272 + A4249_RS11375 0.64 +0.1 2,292,272 + A4249_RS11375 0.64 -1.4 2,292,272 + A4249_RS11375 0.64 -0.0 2,292,273 - A4249_RS11375 0.64 +0.5 2,292,273 - A4249_RS11375 0.64 +0.2 2,292,273 - A4249_RS11375 0.64 +0.6 2,292,273 - A4249_RS11375 0.64 -0.0 2,292,273 - A4249_RS11375 0.64 +0.3 2,292,476 + A4249_RS11375 0.82 +0.6 2,292,476 + A4249_RS11375 0.82 -0.1 2,292,477 - A4249_RS11375 0.83 -0.5 2,292,477 - A4249_RS11375 0.83 -0.4 2,292,477 - A4249_RS11375 0.83 +0.1 2,292,640 + -0.0 2,292,641 - +0.2 2,292,641 - +0.6 2,292,641 - -0.4 2,292,641 - -1.0 2,292,641 - -1.3 2,292,648 + -0.9 2,292,649 - +0.3 2,292,649 - -1.6 2,292,675 + +0.2 2,292,675 + -0.3 2,292,676 - -0.6 2,292,819 + A4249_RS11380 0.20 +2.2 2,292,819 + A4249_RS11380 0.20 -0.6 2,292,820 - A4249_RS11380 0.20 +0.2 2,292,834 - A4249_RS11380 0.23 -1.0 2,292,854 + A4249_RS11380 0.27 -0.6 2,292,854 + A4249_RS11380 0.27 +0.4 2,292,854 + A4249_RS11380 0.27 -0.1 2,292,854 + A4249_RS11380 0.27 -0.7 2,292,854 + A4249_RS11380 0.27 -1.0 2,292,854 + A4249_RS11380 0.27 -1.8 2,292,854 + A4249_RS11380 0.27 +0.5 2,292,854 + A4249_RS11380 0.27 -0.7 2,292,855 - A4249_RS11380 0.27 +0.3 2,292,855 - A4249_RS11380 0.27 +0.4 2,292,855 - A4249_RS11380 0.27 -0.3 2,292,855 - A4249_RS11380 0.27 +0.7 2,292,855 - A4249_RS11380 0.27 -0.3 2,292,855 - A4249_RS11380 0.27 -0.9 2,292,855 - A4249_RS11380 0.27 +0.1 2,292,855 - A4249_RS11380 0.27 -0.7 2,292,855 - A4249_RS11380 0.27 -0.1 2,292,855 - A4249_RS11380 0.27 -0.7 2,292,855 - A4249_RS11380 0.27 +0.1 2,292,855 - A4249_RS11380 0.27 -1.0 2,292,855 - A4249_RS11380 0.27 -0.9 2,292,968 - A4249_RS11380 0.49 -0.3 2,292,995 + A4249_RS11380 0.54 -1.7 2,292,995 + A4249_RS11380 0.54 +0.2 2,292,996 - A4249_RS11380 0.54 +0.5 2,293,064 + A4249_RS11380 0.68 -1.0 2,293,064 + A4249_RS11380 0.68 +1.9 2,293,064 + A4249_RS11380 0.68 -0.1 2,293,064 + A4249_RS11380 0.68 -1.5 2,293,064 + A4249_RS11380 0.68 -0.5 2,293,064 + A4249_RS11380 0.68 -0.6 2,293,064 + A4249_RS11380 0.68 -0.5 2,293,064 + A4249_RS11380 0.68 -0.6 2,293,064 + A4249_RS11380 0.68 -0.9 2,293,064 + A4249_RS11380 0.68 -0.4 2,293,065 - A4249_RS11380 0.68 -0.9 2,293,065 - A4249_RS11380 0.68 +0.1 2,293,065 - A4249_RS11380 0.68 +0.7 2,293,065 - A4249_RS11380 0.68 -1.2 2,293,065 - A4249_RS11380 0.68 +0.4 2,293,065 - A4249_RS11380 0.68 +1.0 2,293,065 - A4249_RS11380 0.68 +1.3 2,293,065 - A4249_RS11380 0.68 +0.5 2,293,065 - A4249_RS11380 0.68 +0.3 2,293,065 - A4249_RS11380 0.68 +0.5 2,293,065 - A4249_RS11380 0.68 -1.1 2,293,435 - A4249_RS11385 0.19 -0.4 2,293,435 - A4249_RS11385 0.19 -0.4 2,293,554 + A4249_RS11385 0.29 -0.4 2,293,611 + A4249_RS11385 0.33 +0.5 2,293,611 + A4249_RS11385 0.33 -0.4 2,293,612 - A4249_RS11385 0.33 -0.3 2,293,612 - A4249_RS11385 0.33 -0.5 2,293,612 - A4249_RS11385 0.33 +0.8 2,293,612 - A4249_RS11385 0.33 +0.9 2,293,620 + A4249_RS11385 0.34 -0.3 2,293,620 + A4249_RS11385 0.34 -1.3 2,293,620 + A4249_RS11385 0.34 -0.5 2,293,620 + A4249_RS11385 0.34 -0.6 2,293,620 + A4249_RS11385 0.34 +0.6 2,293,620 + A4249_RS11385 0.34 +0.5 2,293,620 + A4249_RS11385 0.34 -0.4 2,293,620 + A4249_RS11385 0.34 -0.1 2,293,620 + A4249_RS11385 0.34 +0.3 2,293,621 - A4249_RS11385 0.34 +0.3 2,293,621 - A4249_RS11385 0.34 +0.2 2,293,621 - A4249_RS11385 0.34 -0.0 2,293,621 - A4249_RS11385 0.34 +0.2 2,293,621 - A4249_RS11385 0.34 +0.3 2,293,621 - A4249_RS11385 0.34 +0.0 2,293,621 - A4249_RS11385 0.34 +1.7 2,293,621 - A4249_RS11385 0.34 -0.6 2,293,621 - A4249_RS11385 0.34 +0.3 2,293,621 - A4249_RS11385 0.34 +0.9 2,293,621 - A4249_RS11385 0.34 -0.2 2,293,621 - A4249_RS11385 0.34 -0.5 2,293,621 - A4249_RS11385 0.34 +0.2 2,293,621 - A4249_RS11385 0.34 +0.4 2,293,621 - A4249_RS11385 0.34 +0.5 2,293,795 - A4249_RS11385 0.49 +0.9 2,293,992 + A4249_RS11385 0.65 -1.3 2,293,992 + A4249_RS11385 0.65 -0.4 2,293,992 + A4249_RS11385 0.65 +0.1 2,293,993 - A4249_RS11385 0.65 +0.6 2,293,993 - A4249_RS11385 0.65 +1.0 2,293,993 - A4249_RS11385 0.65 +0.2 2,293,993 - A4249_RS11385 0.65 +0.3 2,293,993 - A4249_RS11385 0.65 -0.2 2,293,993 - A4249_RS11385 0.65 +0.8 2,293,993 - A4249_RS11385 0.65 -0.3 2,294,157 + A4249_RS11385 0.79 -0.3 2,294,157 + A4249_RS11385 0.79 -0.1 2,294,157 + A4249_RS11385 0.79 -0.2 2,294,157 + A4249_RS11385 0.79 +0.3 2,294,338 - +0.7 2,294,413 + +0.7 2,294,413 + -0.3 2,294,539 + -0.6 2,294,830 + A4249_RS11390 0.47 +0.2 2,294,830 + A4249_RS11390 0.47 -0.8 2,294,830 + A4249_RS11390 0.47 -0.2 2,294,858 - A4249_RS11390 0.53 +0.3 2,294,858 - A4249_RS11390 0.53 +0.4 2,294,932 + A4249_RS11390 0.67 -0.3 2,294,941 + A4249_RS11390 0.69 -2.3 2,294,941 + A4249_RS11390 0.69 -0.5 2,294,941 + A4249_RS11390 0.69 -2.5 2,294,941 + A4249_RS11390 0.69 -0.1 2,294,941 + A4249_RS11390 0.69 -0.6 2,294,941 + A4249_RS11390 0.69 +0.6 2,294,941 + A4249_RS11390 0.69 +0.2 2,294,941 + A4249_RS11390 0.69 -0.3 2,294,941 + A4249_RS11390 0.69 -0.4 2,294,941 + A4249_RS11390 0.69 +1.4 2,294,941 + A4249_RS11390 0.69 +0.6 2,294,941 + A4249_RS11390 0.69 +0.8 2,294,941 + A4249_RS11390 0.69 +0.2 2,294,941 + A4249_RS11390 0.69 -0.5 2,294,941 + A4249_RS11390 0.69 -0.0 2,294,942 - A4249_RS11390 0.69 -1.3 2,294,942 - A4249_RS11390 0.69 +0.4 2,294,942 - A4249_RS11390 0.69 -1.4 2,294,942 - A4249_RS11390 0.69 -0.2 2,294,942 - A4249_RS11390 0.69 -0.7 2,294,942 - A4249_RS11390 0.69 -0.4 2,294,942 - A4249_RS11390 0.69 +0.7 2,294,942 - A4249_RS11390 0.69 +0.6 2,294,942 - A4249_RS11390 0.69 +0.1 2,294,942 - A4249_RS11390 0.69 +0.4 2,294,942 - A4249_RS11390 0.69 +0.0 2,294,942 - A4249_RS11390 0.69 -0.1 2,294,942 - A4249_RS11390 0.69 +0.2 2,294,942 - A4249_RS11390 0.69 -0.4 2,294,942 - A4249_RS11390 0.69 -0.1 2,294,942 - A4249_RS11390 0.69 +0.4 2,294,942 - A4249_RS11390 0.69 -0.4 2,294,942 - A4249_RS11390 0.69 +0.1 2,294,942 - A4249_RS11390 0.69 +0.2 2,294,991 - A4249_RS11390 0.78 +0.5 2,295,238 + +0.1 2,295,238 + -0.1 2,295,238 + -1.3 2,295,238 + +0.0 2,295,238 + -0.6 2,295,238 + -0.2 2,295,238 + -0.7 2,295,239 - A4249_RS11395 0.10 +0.2 2,295,239 - A4249_RS11395 0.10 -0.5 2,295,239 - A4249_RS11395 0.10 +0.1 2,295,239 - A4249_RS11395 0.10 -0.5 2,295,239 - A4249_RS11395 0.10 -0.9 2,295,254 + A4249_RS11395 0.18 +0.2 2,295,254 + A4249_RS11395 0.18 -0.6 2,295,255 - A4249_RS11395 0.18 +1.4 2,295,255 - A4249_RS11395 0.18 +0.6 2,295,285 + A4249_RS11395 0.33 -0.9 2,295,390 + A4249_RS11395 0.86 -0.4 2,295,390 + A4249_RS11395 0.86 -1.7 2,295,391 - A4249_RS11395 0.87 +0.7 2,295,391 - A4249_RS11395 0.87 -0.2 2,295,391 - A4249_RS11395 0.87 +0.9 2,295,391 - A4249_RS11395 0.87 -0.8
Or see this region's nucleotide sequence