Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11385

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS11375 and A4249_RS11380 are separated by 44 nucleotidesA4249_RS11380 and A4249_RS11385 overlap by 20 nucleotidesA4249_RS11385 and A4249_RS11390 are separated by 173 nucleotidesA4249_RS11390 and A4249_RS11395 are separated by 116 nucleotides A4249_RS11375: A4249_RS11375 - tRNA epoxyqueuosine(34) reductase QueG, at 2,291,561 to 2,292,670 _RS11375 A4249_RS11380: A4249_RS11380 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 2,292,715 to 2,293,230 _RS11380 A4249_RS11385: A4249_RS11385 - threonine ammonia-lyase, at 2,293,211 to 2,294,413 _RS11385 A4249_RS11390: A4249_RS11390 - hypothetical protein, at 2,294,587 to 2,295,102 _RS11390 A4249_RS11395: A4249_RS11395 - hypothetical protein, at 2,295,219 to 2,295,416 _RS11395 Position (kb) 2293 2294 2295Strain fitness (log2 ratio) -2 -1 0 1 2at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.272 kb on + strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.273 kb on - strand, within A4249_RS11375at 2292.476 kb on + strand, within A4249_RS11375at 2292.476 kb on + strand, within A4249_RS11375at 2292.477 kb on - strand, within A4249_RS11375at 2292.477 kb on - strand, within A4249_RS11375at 2292.477 kb on - strand, within A4249_RS11375at 2292.640 kb on + strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.641 kb on - strandat 2292.648 kb on + strandat 2292.649 kb on - strandat 2292.649 kb on - strandat 2292.675 kb on + strandat 2292.675 kb on + strandat 2292.676 kb on - strandat 2292.819 kb on + strand, within A4249_RS11380at 2292.819 kb on + strand, within A4249_RS11380at 2292.820 kb on - strand, within A4249_RS11380at 2292.834 kb on - strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.854 kb on + strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.855 kb on - strand, within A4249_RS11380at 2292.968 kb on - strand, within A4249_RS11380at 2292.995 kb on + strand, within A4249_RS11380at 2292.995 kb on + strand, within A4249_RS11380at 2292.996 kb on - strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.064 kb on + strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.065 kb on - strand, within A4249_RS11380at 2293.435 kb on - strand, within A4249_RS11385at 2293.435 kb on - strand, within A4249_RS11385at 2293.554 kb on + strand, within A4249_RS11385at 2293.611 kb on + strand, within A4249_RS11385at 2293.611 kb on + strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.612 kb on - strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.620 kb on + strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.621 kb on - strand, within A4249_RS11385at 2293.795 kb on - strand, within A4249_RS11385at 2293.992 kb on + strand, within A4249_RS11385at 2293.992 kb on + strand, within A4249_RS11385at 2293.992 kb on + strand, within A4249_RS11385at 2293.993 kb on - strand, within A4249_RS11385at 2293.993 kb on - strand, within A4249_RS11385at 2293.993 kb on - strand, within A4249_RS11385at 2293.993 kb on - strand, within A4249_RS11385at 2293.993 kb on - strand, within A4249_RS11385at 2293.993 kb on - strand, within A4249_RS11385at 2293.993 kb on - strand, within A4249_RS11385at 2294.157 kb on + strand, within A4249_RS11385at 2294.157 kb on + strand, within A4249_RS11385at 2294.157 kb on + strand, within A4249_RS11385at 2294.157 kb on + strand, within A4249_RS11385at 2294.338 kb on - strandat 2294.413 kb on + strandat 2294.413 kb on + strandat 2294.539 kb on + strandat 2294.830 kb on + strand, within A4249_RS11390at 2294.830 kb on + strand, within A4249_RS11390at 2294.830 kb on + strand, within A4249_RS11390at 2294.858 kb on - strand, within A4249_RS11390at 2294.858 kb on - strand, within A4249_RS11390at 2294.932 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.941 kb on + strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.942 kb on - strand, within A4249_RS11390at 2294.991 kb on - strand, within A4249_RS11390at 2295.238 kb on + strandat 2295.238 kb on + strandat 2295.238 kb on + strandat 2295.238 kb on + strandat 2295.238 kb on + strandat 2295.238 kb on + strandat 2295.238 kb on + strandat 2295.239 kb on - strand, within A4249_RS11395at 2295.239 kb on - strand, within A4249_RS11395at 2295.239 kb on - strand, within A4249_RS11395at 2295.239 kb on - strand, within A4249_RS11395at 2295.239 kb on - strand, within A4249_RS11395at 2295.254 kb on + strand, within A4249_RS11395at 2295.254 kb on + strand, within A4249_RS11395at 2295.255 kb on - strand, within A4249_RS11395at 2295.255 kb on - strand, within A4249_RS11395at 2295.285 kb on + strand, within A4249_RS11395at 2295.390 kb on + strand, within A4249_RS11395at 2295.390 kb on + strand, within A4249_RS11395at 2295.391 kb on - strand, within A4249_RS11395at 2295.391 kb on - strand, within A4249_RS11395at 2295.391 kb on - strand, within A4249_RS11395at 2295.391 kb on - strand, within A4249_RS11395

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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2,292,272 + A4249_RS11375 0.64 +1.6
2,292,272 + A4249_RS11375 0.64 +0.3
2,292,272 + A4249_RS11375 0.64 -1.0
2,292,272 + A4249_RS11375 0.64 -0.2
2,292,272 + A4249_RS11375 0.64 +0.0
2,292,272 + A4249_RS11375 0.64 +0.1
2,292,272 + A4249_RS11375 0.64 -1.4
2,292,272 + A4249_RS11375 0.64 -0.0
2,292,273 - A4249_RS11375 0.64 +0.5
2,292,273 - A4249_RS11375 0.64 +0.2
2,292,273 - A4249_RS11375 0.64 +0.6
2,292,273 - A4249_RS11375 0.64 -0.0
2,292,273 - A4249_RS11375 0.64 +0.3
2,292,476 + A4249_RS11375 0.82 +0.6
2,292,476 + A4249_RS11375 0.82 -0.1
2,292,477 - A4249_RS11375 0.83 -0.5
2,292,477 - A4249_RS11375 0.83 -0.4
2,292,477 - A4249_RS11375 0.83 +0.1
2,292,640 + -0.0
2,292,641 - +0.2
2,292,641 - +0.6
2,292,641 - -0.4
2,292,641 - -1.0
2,292,641 - -1.3
2,292,648 + -0.9
2,292,649 - +0.3
2,292,649 - -1.6
2,292,675 + +0.2
2,292,675 + -0.3
2,292,676 - -0.6
2,292,819 + A4249_RS11380 0.20 +2.2
2,292,819 + A4249_RS11380 0.20 -0.6
2,292,820 - A4249_RS11380 0.20 +0.2
2,292,834 - A4249_RS11380 0.23 -1.0
2,292,854 + A4249_RS11380 0.27 -0.6
2,292,854 + A4249_RS11380 0.27 +0.4
2,292,854 + A4249_RS11380 0.27 -0.1
2,292,854 + A4249_RS11380 0.27 -0.7
2,292,854 + A4249_RS11380 0.27 -1.0
2,292,854 + A4249_RS11380 0.27 -1.8
2,292,854 + A4249_RS11380 0.27 +0.5
2,292,854 + A4249_RS11380 0.27 -0.7
2,292,855 - A4249_RS11380 0.27 +0.3
2,292,855 - A4249_RS11380 0.27 +0.4
2,292,855 - A4249_RS11380 0.27 -0.3
2,292,855 - A4249_RS11380 0.27 +0.7
2,292,855 - A4249_RS11380 0.27 -0.3
2,292,855 - A4249_RS11380 0.27 -0.9
2,292,855 - A4249_RS11380 0.27 +0.1
2,292,855 - A4249_RS11380 0.27 -0.7
2,292,855 - A4249_RS11380 0.27 -0.1
2,292,855 - A4249_RS11380 0.27 -0.7
2,292,855 - A4249_RS11380 0.27 +0.1
2,292,855 - A4249_RS11380 0.27 -1.0
2,292,855 - A4249_RS11380 0.27 -0.9
2,292,968 - A4249_RS11380 0.49 -0.3
2,292,995 + A4249_RS11380 0.54 -1.7
2,292,995 + A4249_RS11380 0.54 +0.2
2,292,996 - A4249_RS11380 0.54 +0.5
2,293,064 + A4249_RS11380 0.68 -1.0
2,293,064 + A4249_RS11380 0.68 +1.9
2,293,064 + A4249_RS11380 0.68 -0.1
2,293,064 + A4249_RS11380 0.68 -1.5
2,293,064 + A4249_RS11380 0.68 -0.5
2,293,064 + A4249_RS11380 0.68 -0.6
2,293,064 + A4249_RS11380 0.68 -0.5
2,293,064 + A4249_RS11380 0.68 -0.6
2,293,064 + A4249_RS11380 0.68 -0.9
2,293,064 + A4249_RS11380 0.68 -0.4
2,293,065 - A4249_RS11380 0.68 -0.9
2,293,065 - A4249_RS11380 0.68 +0.1
2,293,065 - A4249_RS11380 0.68 +0.7
2,293,065 - A4249_RS11380 0.68 -1.2
2,293,065 - A4249_RS11380 0.68 +0.4
2,293,065 - A4249_RS11380 0.68 +1.0
2,293,065 - A4249_RS11380 0.68 +1.3
2,293,065 - A4249_RS11380 0.68 +0.5
2,293,065 - A4249_RS11380 0.68 +0.3
2,293,065 - A4249_RS11380 0.68 +0.5
2,293,065 - A4249_RS11380 0.68 -1.1
2,293,435 - A4249_RS11385 0.19 -0.4
2,293,435 - A4249_RS11385 0.19 -0.4
2,293,554 + A4249_RS11385 0.29 -0.4
2,293,611 + A4249_RS11385 0.33 +0.5
2,293,611 + A4249_RS11385 0.33 -0.4
2,293,612 - A4249_RS11385 0.33 -0.3
2,293,612 - A4249_RS11385 0.33 -0.5
2,293,612 - A4249_RS11385 0.33 +0.8
2,293,612 - A4249_RS11385 0.33 +0.9
2,293,620 + A4249_RS11385 0.34 -0.3
2,293,620 + A4249_RS11385 0.34 -1.3
2,293,620 + A4249_RS11385 0.34 -0.5
2,293,620 + A4249_RS11385 0.34 -0.6
2,293,620 + A4249_RS11385 0.34 +0.6
2,293,620 + A4249_RS11385 0.34 +0.5
2,293,620 + A4249_RS11385 0.34 -0.4
2,293,620 + A4249_RS11385 0.34 -0.1
2,293,620 + A4249_RS11385 0.34 +0.3
2,293,621 - A4249_RS11385 0.34 +0.3
2,293,621 - A4249_RS11385 0.34 +0.2
2,293,621 - A4249_RS11385 0.34 -0.0
2,293,621 - A4249_RS11385 0.34 +0.2
2,293,621 - A4249_RS11385 0.34 +0.3
2,293,621 - A4249_RS11385 0.34 +0.0
2,293,621 - A4249_RS11385 0.34 +1.7
2,293,621 - A4249_RS11385 0.34 -0.6
2,293,621 - A4249_RS11385 0.34 +0.3
2,293,621 - A4249_RS11385 0.34 +0.9
2,293,621 - A4249_RS11385 0.34 -0.2
2,293,621 - A4249_RS11385 0.34 -0.5
2,293,621 - A4249_RS11385 0.34 +0.2
2,293,621 - A4249_RS11385 0.34 +0.4
2,293,621 - A4249_RS11385 0.34 +0.5
2,293,795 - A4249_RS11385 0.49 +0.9
2,293,992 + A4249_RS11385 0.65 -1.3
2,293,992 + A4249_RS11385 0.65 -0.4
2,293,992 + A4249_RS11385 0.65 +0.1
2,293,993 - A4249_RS11385 0.65 +0.6
2,293,993 - A4249_RS11385 0.65 +1.0
2,293,993 - A4249_RS11385 0.65 +0.2
2,293,993 - A4249_RS11385 0.65 +0.3
2,293,993 - A4249_RS11385 0.65 -0.2
2,293,993 - A4249_RS11385 0.65 +0.8
2,293,993 - A4249_RS11385 0.65 -0.3
2,294,157 + A4249_RS11385 0.79 -0.3
2,294,157 + A4249_RS11385 0.79 -0.1
2,294,157 + A4249_RS11385 0.79 -0.2
2,294,157 + A4249_RS11385 0.79 +0.3
2,294,338 - +0.7
2,294,413 + +0.7
2,294,413 + -0.3
2,294,539 + -0.6
2,294,830 + A4249_RS11390 0.47 +0.2
2,294,830 + A4249_RS11390 0.47 -0.8
2,294,830 + A4249_RS11390 0.47 -0.2
2,294,858 - A4249_RS11390 0.53 +0.3
2,294,858 - A4249_RS11390 0.53 +0.4
2,294,932 + A4249_RS11390 0.67 -0.3
2,294,941 + A4249_RS11390 0.69 -2.3
2,294,941 + A4249_RS11390 0.69 -0.5
2,294,941 + A4249_RS11390 0.69 -2.5
2,294,941 + A4249_RS11390 0.69 -0.1
2,294,941 + A4249_RS11390 0.69 -0.6
2,294,941 + A4249_RS11390 0.69 +0.6
2,294,941 + A4249_RS11390 0.69 +0.2
2,294,941 + A4249_RS11390 0.69 -0.3
2,294,941 + A4249_RS11390 0.69 -0.4
2,294,941 + A4249_RS11390 0.69 +1.4
2,294,941 + A4249_RS11390 0.69 +0.6
2,294,941 + A4249_RS11390 0.69 +0.8
2,294,941 + A4249_RS11390 0.69 +0.2
2,294,941 + A4249_RS11390 0.69 -0.5
2,294,941 + A4249_RS11390 0.69 -0.0
2,294,942 - A4249_RS11390 0.69 -1.3
2,294,942 - A4249_RS11390 0.69 +0.4
2,294,942 - A4249_RS11390 0.69 -1.4
2,294,942 - A4249_RS11390 0.69 -0.2
2,294,942 - A4249_RS11390 0.69 -0.7
2,294,942 - A4249_RS11390 0.69 -0.4
2,294,942 - A4249_RS11390 0.69 +0.7
2,294,942 - A4249_RS11390 0.69 +0.6
2,294,942 - A4249_RS11390 0.69 +0.1
2,294,942 - A4249_RS11390 0.69 +0.4
2,294,942 - A4249_RS11390 0.69 +0.0
2,294,942 - A4249_RS11390 0.69 -0.1
2,294,942 - A4249_RS11390 0.69 +0.2
2,294,942 - A4249_RS11390 0.69 -0.4
2,294,942 - A4249_RS11390 0.69 -0.1
2,294,942 - A4249_RS11390 0.69 +0.4
2,294,942 - A4249_RS11390 0.69 -0.4
2,294,942 - A4249_RS11390 0.69 +0.1
2,294,942 - A4249_RS11390 0.69 +0.2
2,294,991 - A4249_RS11390 0.78 +0.5
2,295,238 + +0.1
2,295,238 + -0.1
2,295,238 + -1.3
2,295,238 + +0.0
2,295,238 + -0.6
2,295,238 + -0.2
2,295,238 + -0.7
2,295,239 - A4249_RS11395 0.10 +0.2
2,295,239 - A4249_RS11395 0.10 -0.5
2,295,239 - A4249_RS11395 0.10 +0.1
2,295,239 - A4249_RS11395 0.10 -0.5
2,295,239 - A4249_RS11395 0.10 -0.9
2,295,254 + A4249_RS11395 0.18 +0.2
2,295,254 + A4249_RS11395 0.18 -0.6
2,295,255 - A4249_RS11395 0.18 +1.4
2,295,255 - A4249_RS11395 0.18 +0.6
2,295,285 + A4249_RS11395 0.33 -0.9
2,295,390 + A4249_RS11395 0.86 -0.4
2,295,390 + A4249_RS11395 0.86 -1.7
2,295,391 - A4249_RS11395 0.87 +0.7
2,295,391 - A4249_RS11395 0.87 -0.2
2,295,391 - A4249_RS11395 0.87 +0.9
2,295,391 - A4249_RS11395 0.87 -0.8

Or see this region's nucleotide sequence