Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10415

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10410 and A4249_RS10415 are separated by 203 nucleotidesA4249_RS10415 and A4249_RS10420 are separated by 164 nucleotidesA4249_RS10420 and A4249_RS10425 overlap by 4 nucleotides A4249_RS10410: A4249_RS10410 - TonB-dependent receptor, at 2,091,148 to 2,093,787 _RS10410 A4249_RS10415: A4249_RS10415 - Na+/H+ antiporter NhaA, at 2,093,991 to 2,095,235 _RS10415 A4249_RS10420: A4249_RS10420 - YnfA family protein, at 2,095,400 to 2,095,723 _RS10420 A4249_RS10425: A4249_RS10425 - RNA methyltransferase, at 2,095,720 to 2,096,511 _RS10425 Position (kb) 2093 2094 2095 2096Strain fitness (log2 ratio) -2 -1 0 1 2at 2093.006 kb on + strand, within A4249_RS10410at 2093.006 kb on + strand, within A4249_RS10410at 2093.007 kb on - strand, within A4249_RS10410at 2093.007 kb on - strand, within A4249_RS10410at 2093.007 kb on - strand, within A4249_RS10410at 2093.007 kb on - strand, within A4249_RS10410at 2093.007 kb on - strand, within A4249_RS10410at 2093.007 kb on - strand, within A4249_RS10410at 2093.007 kb on - strand, within A4249_RS10410at 2093.024 kb on + strand, within A4249_RS10410at 2093.024 kb on + strand, within A4249_RS10410at 2093.093 kb on + strand, within A4249_RS10410at 2093.093 kb on + strand, within A4249_RS10410at 2093.093 kb on + strand, within A4249_RS10410at 2093.093 kb on + strand, within A4249_RS10410at 2093.094 kb on - strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.150 kb on + strand, within A4249_RS10410at 2093.151 kb on - strand, within A4249_RS10410at 2093.151 kb on - strand, within A4249_RS10410at 2093.151 kb on - strand, within A4249_RS10410at 2093.302 kb on - strand, within A4249_RS10410at 2093.423 kb on + strand, within A4249_RS10410at 2093.423 kb on + strand, within A4249_RS10410at 2093.423 kb on + strand, within A4249_RS10410at 2093.424 kb on - strand, within A4249_RS10410at 2093.424 kb on - strand, within A4249_RS10410at 2093.857 kb on + strandat 2093.857 kb on + strandat 2093.858 kb on - strandat 2093.858 kb on - strandat 2093.858 kb on - strandat 2093.858 kb on - strandat 2093.887 kb on + strandat 2093.887 kb on + strandat 2093.888 kb on - strandat 2093.992 kb on + strandat 2093.992 kb on + strandat 2093.992 kb on + strandat 2093.992 kb on + strandat 2093.992 kb on + strandat 2093.992 kb on + strandat 2093.992 kb on + strandat 2093.993 kb on - strandat 2093.993 kb on - strandat 2093.993 kb on - strandat 2093.993 kb on - strandat 2095.364 kb on + strandat 2095.365 kb on - strandat 2095.365 kb on - strandat 2095.365 kb on - strandat 2095.365 kb on - strandat 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.522 kb on + strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.523 kb on - strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.524 kb on + strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.525 kb on - strand, within A4249_RS10420at 2095.536 kb on + strand, within A4249_RS10420at 2095.536 kb on + strand, within A4249_RS10420at 2095.537 kb on - strand, within A4249_RS10420at 2095.704 kb on + strandat 2095.705 kb on - strandat 2095.705 kb on - strandat 2095.705 kb on - strandat 2095.731 kb on + strandat 2095.731 kb on + strandat 2095.732 kb on - strandat 2095.732 kb on - strandat 2095.907 kb on + strand, within A4249_RS10425at 2095.908 kb on - strand, within A4249_RS10425at 2095.908 kb on - strand, within A4249_RS10425at 2095.908 kb on - strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.949 kb on + strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2095.950 kb on - strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.039 kb on + strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.040 kb on - strand, within A4249_RS10425at 2096.201 kb on + strand, within A4249_RS10425at 2096.201 kb on + strand, within A4249_RS10425at 2096.201 kb on + strand, within A4249_RS10425at 2096.202 kb on - strand, within A4249_RS10425at 2096.202 kb on - strand, within A4249_RS10425at 2096.202 kb on - strand, within A4249_RS10425

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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2,093,006 + A4249_RS10410 0.70 -0.9
2,093,006 + A4249_RS10410 0.70 -0.0
2,093,007 - A4249_RS10410 0.70 +0.2
2,093,007 - A4249_RS10410 0.70 +1.0
2,093,007 - A4249_RS10410 0.70 +0.6
2,093,007 - A4249_RS10410 0.70 -0.5
2,093,007 - A4249_RS10410 0.70 -0.5
2,093,007 - A4249_RS10410 0.70 -0.4
2,093,007 - A4249_RS10410 0.70 +0.4
2,093,024 + A4249_RS10410 0.71 +1.0
2,093,024 + A4249_RS10410 0.71 -0.4
2,093,093 + A4249_RS10410 0.74 -0.0
2,093,093 + A4249_RS10410 0.74 +0.6
2,093,093 + A4249_RS10410 0.74 -0.6
2,093,093 + A4249_RS10410 0.74 -0.2
2,093,094 - A4249_RS10410 0.74 -0.0
2,093,150 + A4249_RS10410 0.76 +1.2
2,093,150 + A4249_RS10410 0.76 -0.1
2,093,150 + A4249_RS10410 0.76 +0.4
2,093,150 + A4249_RS10410 0.76 -0.4
2,093,150 + A4249_RS10410 0.76 +0.1
2,093,150 + A4249_RS10410 0.76 -0.1
2,093,150 + A4249_RS10410 0.76 -0.5
2,093,150 + A4249_RS10410 0.76 +0.1
2,093,151 - A4249_RS10410 0.76 -0.2
2,093,151 - A4249_RS10410 0.76 -0.3
2,093,151 - A4249_RS10410 0.76 -0.7
2,093,302 - A4249_RS10410 0.82 -0.3
2,093,423 + A4249_RS10410 0.86 -0.5
2,093,423 + A4249_RS10410 0.86 +1.7
2,093,423 + A4249_RS10410 0.86 +0.2
2,093,424 - A4249_RS10410 0.86 +0.0
2,093,424 - A4249_RS10410 0.86 -0.2
2,093,857 + +0.2
2,093,857 + -0.2
2,093,858 - -0.9
2,093,858 - -0.2
2,093,858 - +0.3
2,093,858 - -0.5
2,093,887 + +0.5
2,093,887 + -1.7
2,093,888 - -1.5
2,093,992 + +0.1
2,093,992 + -1.1
2,093,992 + +0.6
2,093,992 + +0.2
2,093,992 + +0.7
2,093,992 + -1.3
2,093,992 + -0.4
2,093,993 - -0.6
2,093,993 - -0.1
2,093,993 - -0.4
2,093,993 - -0.4
2,095,364 + -0.6
2,095,365 - +0.6
2,095,365 - +0.5
2,095,365 - -0.3
2,095,365 - -1.5
2,095,522 + A4249_RS10420 0.38 +0.5
2,095,522 + A4249_RS10420 0.38 -0.7
2,095,522 + A4249_RS10420 0.38 -0.1
2,095,522 + A4249_RS10420 0.38 -0.3
2,095,522 + A4249_RS10420 0.38 -0.5
2,095,522 + A4249_RS10420 0.38 +0.2
2,095,522 + A4249_RS10420 0.38 +1.3
2,095,523 - A4249_RS10420 0.38 +1.3
2,095,523 - A4249_RS10420 0.38 -0.0
2,095,523 - A4249_RS10420 0.38 +0.2
2,095,523 - A4249_RS10420 0.38 -0.8
2,095,523 - A4249_RS10420 0.38 -0.8
2,095,523 - A4249_RS10420 0.38 +0.5
2,095,523 - A4249_RS10420 0.38 +0.0
2,095,524 + A4249_RS10420 0.38 +0.1
2,095,524 + A4249_RS10420 0.38 -0.1
2,095,524 + A4249_RS10420 0.38 -0.7
2,095,524 + A4249_RS10420 0.38 +0.2
2,095,524 + A4249_RS10420 0.38 -0.5
2,095,524 + A4249_RS10420 0.38 -0.3
2,095,524 + A4249_RS10420 0.38 +0.4
2,095,524 + A4249_RS10420 0.38 +0.9
2,095,524 + A4249_RS10420 0.38 -0.0
2,095,524 + A4249_RS10420 0.38 +0.0
2,095,524 + A4249_RS10420 0.38 -0.4
2,095,525 - A4249_RS10420 0.39 +0.1
2,095,525 - A4249_RS10420 0.39 -0.4
2,095,525 - A4249_RS10420 0.39 -0.4
2,095,525 - A4249_RS10420 0.39 +2.1
2,095,525 - A4249_RS10420 0.39 -1.0
2,095,525 - A4249_RS10420 0.39 +0.4
2,095,525 - A4249_RS10420 0.39 -1.1
2,095,525 - A4249_RS10420 0.39 +0.2
2,095,525 - A4249_RS10420 0.39 +0.3
2,095,525 - A4249_RS10420 0.39 -1.1
2,095,536 + A4249_RS10420 0.42 +0.4
2,095,536 + A4249_RS10420 0.42 -0.3
2,095,537 - A4249_RS10420 0.42 +0.5
2,095,704 + +0.1
2,095,705 - -0.3
2,095,705 - +0.1
2,095,705 - +0.3
2,095,731 + -0.2
2,095,731 + +0.3
2,095,732 - -1.8
2,095,732 - +0.1
2,095,907 + A4249_RS10425 0.24 +0.3
2,095,908 - A4249_RS10425 0.24 -0.3
2,095,908 - A4249_RS10425 0.24 -0.3
2,095,908 - A4249_RS10425 0.24 -1.5
2,095,949 + A4249_RS10425 0.29 +0.4
2,095,949 + A4249_RS10425 0.29 -0.7
2,095,949 + A4249_RS10425 0.29 +0.5
2,095,949 + A4249_RS10425 0.29 -0.8
2,095,949 + A4249_RS10425 0.29 -0.1
2,095,949 + A4249_RS10425 0.29 +0.2
2,095,949 + A4249_RS10425 0.29 -0.4
2,095,949 + A4249_RS10425 0.29 -0.4
2,095,949 + A4249_RS10425 0.29 +0.3
2,095,949 + A4249_RS10425 0.29 +0.3
2,095,949 + A4249_RS10425 0.29 -1.5
2,095,950 - A4249_RS10425 0.29 +0.8
2,095,950 - A4249_RS10425 0.29 -0.2
2,095,950 - A4249_RS10425 0.29 +0.6
2,095,950 - A4249_RS10425 0.29 -0.3
2,095,950 - A4249_RS10425 0.29 -1.1
2,095,950 - A4249_RS10425 0.29 +0.3
2,095,950 - A4249_RS10425 0.29 +0.2
2,095,950 - A4249_RS10425 0.29 +0.4
2,095,950 - A4249_RS10425 0.29 +0.1
2,095,950 - A4249_RS10425 0.29 -0.8
2,095,950 - A4249_RS10425 0.29 +0.3
2,096,039 + A4249_RS10425 0.40 -0.7
2,096,039 + A4249_RS10425 0.40 -0.7
2,096,039 + A4249_RS10425 0.40 +0.9
2,096,039 + A4249_RS10425 0.40 -1.7
2,096,039 + A4249_RS10425 0.40 -0.3
2,096,039 + A4249_RS10425 0.40 +0.8
2,096,039 + A4249_RS10425 0.40 +0.5
2,096,039 + A4249_RS10425 0.40 +0.4
2,096,040 - A4249_RS10425 0.40 +0.0
2,096,040 - A4249_RS10425 0.40 +1.5
2,096,040 - A4249_RS10425 0.40 -1.0
2,096,040 - A4249_RS10425 0.40 -0.0
2,096,040 - A4249_RS10425 0.40 +0.7
2,096,040 - A4249_RS10425 0.40 -0.1
2,096,040 - A4249_RS10425 0.40 +1.3
2,096,201 + A4249_RS10425 0.61 -0.6
2,096,201 + A4249_RS10425 0.61 +0.8
2,096,201 + A4249_RS10425 0.61 +0.8
2,096,202 - A4249_RS10425 0.61 +0.1
2,096,202 - A4249_RS10425 0.61 +0.6
2,096,202 - A4249_RS10425 0.61 +1.5

Or see this region's nucleotide sequence