Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10265 and A4249_RS10270 are separated by 153 nucleotides A4249_RS10270 and A4249_RS10275 overlap by 4 nucleotides A4249_RS10275 and A4249_RS10280 are separated by 84 nucleotides
A4249_RS10265: A4249_RS10265 - hypothetical protein, at 2,061,121 to 2,062,110
_RS10265
A4249_RS10270: A4249_RS10270 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 2,062,264 to 2,063,559
_RS10270
A4249_RS10275: A4249_RS10275 - Lrp/AsnC family transcriptional regulator, at 2,063,556 to 2,064,038
_RS10275
A4249_RS10280: A4249_RS10280 - DMT family transporter, at 2,064,123 to 2,065,031
_RS10280
Position (kb)
2062
2063
2064 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2061.472 kb on + strand, within A4249_RS10265 at 2061.472 kb on + strand, within A4249_RS10265 at 2061.472 kb on + strand, within A4249_RS10265 at 2061.472 kb on + strand, within A4249_RS10265 at 2061.472 kb on + strand, within A4249_RS10265 at 2061.473 kb on - strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.538 kb on + strand, within A4249_RS10265 at 2061.539 kb on - strand, within A4249_RS10265 at 2061.539 kb on - strand, within A4249_RS10265 at 2061.539 kb on - strand, within A4249_RS10265 at 2061.539 kb on - strand, within A4249_RS10265 at 2061.539 kb on - strand, within A4249_RS10265 at 2061.539 kb on - strand, within A4249_RS10265 at 2061.539 kb on - strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.540 kb on + strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.541 kb on - strand, within A4249_RS10265 at 2061.898 kb on + strand, within A4249_RS10265 at 2061.899 kb on - strand, within A4249_RS10265 at 2061.899 kb on - strand, within A4249_RS10265 at 2061.944 kb on - strand, within A4249_RS10265 at 2061.971 kb on - strand, within A4249_RS10265 at 2061.971 kb on - strand, within A4249_RS10265 at 2062.108 kb on + strand at 2062.108 kb on + strand at 2062.218 kb on + strand at 2062.219 kb on - strand at 2062.228 kb on + strand at 2062.228 kb on + strand at 2062.228 kb on + strand at 2062.228 kb on + strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.229 kb on - strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.230 kb on + strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.231 kb on - strand at 2062.685 kb on - strand, within A4249_RS10270 at 2062.976 kb on + strand, within A4249_RS10270 at 2062.976 kb on + strand, within A4249_RS10270 at 2062.977 kb on - strand, within A4249_RS10270 at 2063.320 kb on + strand, within A4249_RS10270 at 2063.320 kb on + strand, within A4249_RS10270 at 2063.320 kb on + strand, within A4249_RS10270 at 2063.320 kb on + strand, within A4249_RS10270 at 2063.321 kb on - strand, within A4249_RS10270 at 2063.321 kb on - strand, within A4249_RS10270 at 2063.321 kb on - strand, within A4249_RS10270 at 2063.321 kb on - strand, within A4249_RS10270 at 2063.557 kb on + strand at 2063.557 kb on + strand at 2063.557 kb on + strand at 2063.557 kb on + strand at 2063.558 kb on - strand at 2063.558 kb on - strand at 2063.558 kb on - strand at 2063.558 kb on - strand at 2063.660 kb on + strand, within A4249_RS10275 at 2063.674 kb on + strand, within A4249_RS10275 at 2063.674 kb on + strand, within A4249_RS10275 at 2063.674 kb on + strand, within A4249_RS10275 at 2063.674 kb on + strand, within A4249_RS10275 at 2063.674 kb on + strand, within A4249_RS10275 at 2063.674 kb on + strand, within A4249_RS10275 at 2063.675 kb on - strand, within A4249_RS10275 at 2063.675 kb on - strand, within A4249_RS10275 at 2063.675 kb on - strand, within A4249_RS10275 at 2063.675 kb on - strand, within A4249_RS10275 at 2063.675 kb on - strand, within A4249_RS10275 at 2063.675 kb on - strand, within A4249_RS10275 at 2063.710 kb on + strand, within A4249_RS10275 at 2063.711 kb on - strand, within A4249_RS10275 at 2063.711 kb on - strand, within A4249_RS10275 at 2063.711 kb on - strand, within A4249_RS10275 at 2064.002 kb on + strand at 2064.003 kb on - strand at 2064.003 kb on - strand at 2064.003 kb on - strand at 2064.003 kb on - strand at 2064.040 kb on - strand at 2064.107 kb on - strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.111 kb on + strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.112 kb on - strand at 2064.118 kb on - strand at 2064.184 kb on - strand at 2064.204 kb on - strand at 2064.279 kb on + strand, within A4249_RS10280 at 2064.372 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.408 kb on + strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280 at 2064.409 kb on - strand, within A4249_RS10280
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 2,061,472 + A4249_RS10265 0.35 +0.2 2,061,472 + A4249_RS10265 0.35 -0.4 2,061,472 + A4249_RS10265 0.35 +0.3 2,061,472 + A4249_RS10265 0.35 -0.5 2,061,472 + A4249_RS10265 0.35 -0.1 2,061,473 - A4249_RS10265 0.36 +0.2 2,061,538 + A4249_RS10265 0.42 -0.7 2,061,538 + A4249_RS10265 0.42 -1.4 2,061,538 + A4249_RS10265 0.42 -0.3 2,061,538 + A4249_RS10265 0.42 -1.0 2,061,538 + A4249_RS10265 0.42 -0.1 2,061,538 + A4249_RS10265 0.42 +0.4 2,061,538 + A4249_RS10265 0.42 +0.1 2,061,538 + A4249_RS10265 0.42 +0.5 2,061,539 - A4249_RS10265 0.42 -0.7 2,061,539 - A4249_RS10265 0.42 +0.1 2,061,539 - A4249_RS10265 0.42 -0.3 2,061,539 - A4249_RS10265 0.42 -0.3 2,061,539 - A4249_RS10265 0.42 +0.3 2,061,539 - A4249_RS10265 0.42 +0.5 2,061,539 - A4249_RS10265 0.42 +1.1 2,061,540 + A4249_RS10265 0.42 -0.1 2,061,540 + A4249_RS10265 0.42 +0.4 2,061,540 + A4249_RS10265 0.42 -0.8 2,061,540 + A4249_RS10265 0.42 -0.1 2,061,540 + A4249_RS10265 0.42 +0.1 2,061,540 + A4249_RS10265 0.42 -0.4 2,061,540 + A4249_RS10265 0.42 +1.5 2,061,540 + A4249_RS10265 0.42 +0.2 2,061,540 + A4249_RS10265 0.42 +1.0 2,061,540 + A4249_RS10265 0.42 -0.0 2,061,540 + A4249_RS10265 0.42 +0.3 2,061,540 + A4249_RS10265 0.42 -0.3 2,061,540 + A4249_RS10265 0.42 -3.2 2,061,540 + A4249_RS10265 0.42 +0.1 2,061,541 - A4249_RS10265 0.42 -0.0 2,061,541 - A4249_RS10265 0.42 -0.1 2,061,541 - A4249_RS10265 0.42 +0.8 2,061,541 - A4249_RS10265 0.42 -0.5 2,061,541 - A4249_RS10265 0.42 -0.7 2,061,541 - A4249_RS10265 0.42 -0.4 2,061,541 - A4249_RS10265 0.42 -0.1 2,061,541 - A4249_RS10265 0.42 -0.2 2,061,898 + A4249_RS10265 0.78 -0.5 2,061,899 - A4249_RS10265 0.79 -0.7 2,061,899 - A4249_RS10265 0.79 -0.4 2,061,944 - A4249_RS10265 0.83 -0.6 2,061,971 - A4249_RS10265 0.86 -0.1 2,061,971 - A4249_RS10265 0.86 -0.5 2,062,108 + +0.9 2,062,108 + -0.2 2,062,218 + +0.2 2,062,219 - +0.4 2,062,228 + -0.0 2,062,228 + -1.7 2,062,228 + -0.1 2,062,228 + -1.2 2,062,229 - -0.1 2,062,229 - +0.1 2,062,229 - -0.7 2,062,229 - +0.1 2,062,229 - +0.0 2,062,229 - -0.3 2,062,229 - +0.4 2,062,229 - +0.8 2,062,229 - +1.9 2,062,229 - -1.1 2,062,229 - -0.0 2,062,229 - -0.7 2,062,229 - -1.0 2,062,229 - +1.0 2,062,230 + +1.0 2,062,230 + -0.1 2,062,230 + +1.2 2,062,230 + -0.2 2,062,230 + +1.2 2,062,230 + -0.2 2,062,230 + -0.7 2,062,230 + -0.7 2,062,230 + +0.3 2,062,230 + +0.1 2,062,231 - +0.3 2,062,231 - -0.1 2,062,231 - -0.0 2,062,231 - +0.1 2,062,231 - -0.2 2,062,231 - -0.8 2,062,231 - -0.9 2,062,231 - -0.3 2,062,231 - -0.5 2,062,231 - +0.9 2,062,231 - +0.9 2,062,685 - A4249_RS10270 0.32 +0.2 2,062,976 + A4249_RS10270 0.55 +0.3 2,062,976 + A4249_RS10270 0.55 -0.0 2,062,977 - A4249_RS10270 0.55 -0.2 2,063,320 + A4249_RS10270 0.81 -0.2 2,063,320 + A4249_RS10270 0.81 -0.1 2,063,320 + A4249_RS10270 0.81 -0.0 2,063,320 + A4249_RS10270 0.81 -0.9 2,063,321 - A4249_RS10270 0.82 -0.6 2,063,321 - A4249_RS10270 0.82 +0.0 2,063,321 - A4249_RS10270 0.82 -0.1 2,063,321 - A4249_RS10270 0.82 -0.1 2,063,557 + +0.0 2,063,557 + +0.4 2,063,557 + -0.2 2,063,557 + +0.2 2,063,558 - +0.4 2,063,558 - -0.3 2,063,558 - -0.2 2,063,558 - +0.7 2,063,660 + A4249_RS10275 0.22 +0.4 2,063,674 + A4249_RS10275 0.24 -0.7 2,063,674 + A4249_RS10275 0.24 +0.1 2,063,674 + A4249_RS10275 0.24 -0.2 2,063,674 + A4249_RS10275 0.24 +0.4 2,063,674 + A4249_RS10275 0.24 -0.1 2,063,674 + A4249_RS10275 0.24 -0.2 2,063,675 - A4249_RS10275 0.25 +0.3 2,063,675 - A4249_RS10275 0.25 -0.4 2,063,675 - A4249_RS10275 0.25 -0.1 2,063,675 - A4249_RS10275 0.25 -1.3 2,063,675 - A4249_RS10275 0.25 +0.8 2,063,675 - A4249_RS10275 0.25 -1.4 2,063,710 + A4249_RS10275 0.32 -0.9 2,063,711 - A4249_RS10275 0.32 -0.6 2,063,711 - A4249_RS10275 0.32 -0.6 2,063,711 - A4249_RS10275 0.32 -0.2 2,064,002 + +0.9 2,064,003 - +0.5 2,064,003 - +0.7 2,064,003 - -0.9 2,064,003 - -0.6 2,064,040 - +1.1 2,064,107 - +1.1 2,064,111 + -0.6 2,064,111 + +0.6 2,064,111 + -0.2 2,064,111 + +0.1 2,064,111 + +0.3 2,064,112 - +0.3 2,064,112 - -0.2 2,064,112 - +0.9 2,064,112 - +2.4 2,064,112 - +0.3 2,064,118 - -0.1 2,064,184 - +0.1 2,064,204 - +0.4 2,064,279 + A4249_RS10280 0.17 -0.1 2,064,372 + A4249_RS10280 0.27 +0.5 2,064,408 + A4249_RS10280 0.31 -0.2 2,064,408 + A4249_RS10280 0.31 -0.6 2,064,408 + A4249_RS10280 0.31 -0.6 2,064,408 + A4249_RS10280 0.31 -0.2 2,064,409 - A4249_RS10280 0.31 -0.2 2,064,409 - A4249_RS10280 0.31 -0.7 2,064,409 - A4249_RS10280 0.31 -0.1 2,064,409 - A4249_RS10280 0.31 +0.6 2,064,409 - A4249_RS10280 0.31 +0.0
Or see this region's nucleotide sequence