Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10235

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10230 and A4249_RS10235 are separated by 95 nucleotidesA4249_RS10235 and A4249_RS10240 overlap by 4 nucleotides A4249_RS10230: A4249_RS10230 - ABC transporter substrate-binding protein, at 2,053,886 to 2,054,926 _RS10230 A4249_RS10235: A4249_RS10235 - hypothetical protein, at 2,055,022 to 2,055,924 _RS10235 A4249_RS10240: A4249_RS10240 - DUF2336 domain-containing protein, at 2,055,921 to 2,057,036 _RS10240 Position (kb) 2055 2056Strain fitness (log2 ratio) -2 -1 0 1at 2054.971 kb on - strandat 2054.986 kb on - strandat 2054.986 kb on - strandat 2054.986 kb on - strandat 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.124 kb on + strand, within A4249_RS10235at 2055.125 kb on - strand, within A4249_RS10235at 2055.125 kb on - strand, within A4249_RS10235at 2055.125 kb on - strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.372 kb on + strand, within A4249_RS10235at 2055.373 kb on - strand, within A4249_RS10235at 2055.373 kb on - strand, within A4249_RS10235at 2055.373 kb on - strand, within A4249_RS10235at 2055.384 kb on - strand, within A4249_RS10235at 2055.384 kb on - strand, within A4249_RS10235at 2055.399 kb on - strand, within A4249_RS10235at 2055.442 kb on + strand, within A4249_RS10235at 2055.443 kb on - strand, within A4249_RS10235at 2055.443 kb on - strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.613 kb on + strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.614 kb on - strand, within A4249_RS10235at 2055.718 kb on + strand, within A4249_RS10235at 2055.718 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.721 kb on + strand, within A4249_RS10235at 2055.722 kb on - strand, within A4249_RS10235at 2055.722 kb on - strand, within A4249_RS10235at 2055.781 kb on + strand, within A4249_RS10235at 2055.781 kb on + strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235at 2055.782 kb on - strand, within A4249_RS10235at 2056.089 kb on + strand, within A4249_RS10240at 2056.527 kb on + strand, within A4249_RS10240at 2056.527 kb on + strand, within A4249_RS10240at 2056.527 kb on + strand, within A4249_RS10240at 2056.527 kb on + strand, within A4249_RS10240at 2056.527 kb on + strand, within A4249_RS10240at 2056.527 kb on + strand, within A4249_RS10240at 2056.528 kb on - strand, within A4249_RS10240at 2056.528 kb on - strand, within A4249_RS10240at 2056.528 kb on - strand, within A4249_RS10240at 2056.528 kb on - strand, within A4249_RS10240at 2056.528 kb on - strand, within A4249_RS10240at 2056.528 kb on - strand, within A4249_RS10240at 2056.528 kb on - strand, within A4249_RS10240at 2056.662 kb on + strand, within A4249_RS10240at 2056.663 kb on - strand, within A4249_RS10240at 2056.663 kb on - strand, within A4249_RS10240at 2056.663 kb on - strand, within A4249_RS10240at 2056.680 kb on + strand, within A4249_RS10240at 2056.680 kb on + strand, within A4249_RS10240at 2056.680 kb on + strand, within A4249_RS10240at 2056.681 kb on - strand, within A4249_RS10240at 2056.681 kb on - strand, within A4249_RS10240at 2056.681 kb on - strand, within A4249_RS10240at 2056.884 kb on + strand, within A4249_RS10240at 2056.885 kb on - strand, within A4249_RS10240at 2056.885 kb on - strand, within A4249_RS10240at 2056.893 kb on + strand, within A4249_RS10240at 2056.893 kb on + strand, within A4249_RS10240at 2056.893 kb on + strand, within A4249_RS10240at 2056.893 kb on + strand, within A4249_RS10240at 2056.893 kb on + strand, within A4249_RS10240at 2056.894 kb on - strand, within A4249_RS10240at 2056.894 kb on - strand, within A4249_RS10240

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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2,054,971 - +0.0
2,054,986 - -0.4
2,054,986 - -1.2
2,054,986 - +0.1
2,055,124 + A4249_RS10235 0.11 -0.7
2,055,124 + A4249_RS10235 0.11 +0.2
2,055,124 + A4249_RS10235 0.11 +0.5
2,055,124 + A4249_RS10235 0.11 -0.1
2,055,124 + A4249_RS10235 0.11 +0.3
2,055,125 - A4249_RS10235 0.11 -0.2
2,055,125 - A4249_RS10235 0.11 -0.2
2,055,125 - A4249_RS10235 0.11 +0.6
2,055,372 + A4249_RS10235 0.39 +0.9
2,055,372 + A4249_RS10235 0.39 -0.8
2,055,372 + A4249_RS10235 0.39 +0.8
2,055,372 + A4249_RS10235 0.39 -1.4
2,055,372 + A4249_RS10235 0.39 +0.4
2,055,372 + A4249_RS10235 0.39 +0.8
2,055,373 - A4249_RS10235 0.39 +0.4
2,055,373 - A4249_RS10235 0.39 -0.1
2,055,373 - A4249_RS10235 0.39 -0.5
2,055,384 - A4249_RS10235 0.40 -0.0
2,055,384 - A4249_RS10235 0.40 -0.1
2,055,399 - A4249_RS10235 0.42 +0.1
2,055,442 + A4249_RS10235 0.47 +1.3
2,055,443 - A4249_RS10235 0.47 -0.3
2,055,443 - A4249_RS10235 0.47 -0.3
2,055,613 + A4249_RS10235 0.65 +0.2
2,055,613 + A4249_RS10235 0.65 +0.4
2,055,613 + A4249_RS10235 0.65 +0.2
2,055,613 + A4249_RS10235 0.65 +0.4
2,055,614 - A4249_RS10235 0.66 +1.2
2,055,614 - A4249_RS10235 0.66 -0.0
2,055,614 - A4249_RS10235 0.66 +0.2
2,055,614 - A4249_RS10235 0.66 -0.1
2,055,614 - A4249_RS10235 0.66 -0.5
2,055,718 + A4249_RS10235 0.77 +0.6
2,055,718 + A4249_RS10235 0.77 -0.2
2,055,721 + A4249_RS10235 0.77 -0.4
2,055,721 + A4249_RS10235 0.77 +0.1
2,055,721 + A4249_RS10235 0.77 -0.1
2,055,721 + A4249_RS10235 0.77 -0.2
2,055,722 - A4249_RS10235 0.78 -0.3
2,055,722 - A4249_RS10235 0.78 +0.0
2,055,781 + A4249_RS10235 0.84 -1.9
2,055,781 + A4249_RS10235 0.84 -0.1
2,055,782 - A4249_RS10235 0.84 +0.1
2,055,782 - A4249_RS10235 0.84 +0.3
2,055,782 - A4249_RS10235 0.84 +0.6
2,055,782 - A4249_RS10235 0.84 +0.0
2,056,089 + A4249_RS10240 0.15 -1.1
2,056,527 + A4249_RS10240 0.54 -0.7
2,056,527 + A4249_RS10240 0.54 +0.7
2,056,527 + A4249_RS10240 0.54 +0.0
2,056,527 + A4249_RS10240 0.54 -0.2
2,056,527 + A4249_RS10240 0.54 -0.2
2,056,527 + A4249_RS10240 0.54 -0.3
2,056,528 - A4249_RS10240 0.54 -0.4
2,056,528 - A4249_RS10240 0.54 -1.0
2,056,528 - A4249_RS10240 0.54 +0.9
2,056,528 - A4249_RS10240 0.54 +0.9
2,056,528 - A4249_RS10240 0.54 -0.5
2,056,528 - A4249_RS10240 0.54 +0.2
2,056,528 - A4249_RS10240 0.54 +0.1
2,056,662 + A4249_RS10240 0.66 +0.0
2,056,663 - A4249_RS10240 0.66 +0.4
2,056,663 - A4249_RS10240 0.66 +0.4
2,056,663 - A4249_RS10240 0.66 -0.6
2,056,680 + A4249_RS10240 0.68 -0.2
2,056,680 + A4249_RS10240 0.68 -0.1
2,056,680 + A4249_RS10240 0.68 -0.2
2,056,681 - A4249_RS10240 0.68 +0.2
2,056,681 - A4249_RS10240 0.68 -0.0
2,056,681 - A4249_RS10240 0.68 -1.6
2,056,884 + A4249_RS10240 0.86 -0.9
2,056,885 - A4249_RS10240 0.86 +0.8
2,056,885 - A4249_RS10240 0.86 +0.1
2,056,893 + A4249_RS10240 0.87 +0.4
2,056,893 + A4249_RS10240 0.87 +0.2
2,056,893 + A4249_RS10240 0.87 -0.2
2,056,893 + A4249_RS10240 0.87 -0.9
2,056,893 + A4249_RS10240 0.87 +0.7
2,056,894 - A4249_RS10240 0.87 -0.1
2,056,894 - A4249_RS10240 0.87 -0.2

Or see this region's nucleotide sequence