Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06665

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06655 and A4249_RS06660 overlap by 1 nucleotidesA4249_RS06660 and A4249_RS06665 are separated by 72 nucleotidesA4249_RS06665 and A4249_RS06670 overlap by 16 nucleotides A4249_RS06655: A4249_RS06655 - TPM domain-containing protein, at 1,355,981 to 1,356,808 _RS06655 A4249_RS06660: A4249_RS06660 - TPM domain-containing protein, at 1,356,808 to 1,357,485 _RS06660 A4249_RS06665: A4249_RS06665 - endonuclease/exonuclease/phosphatase family protein, at 1,357,558 to 1,358,295 _RS06665 A4249_RS06670: A4249_RS06670 - phospholipase D-like domain-containing protein, at 1,358,280 to 1,359,758 _RS06670 Position (kb) 1357 1358 1359Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1356.603 kb on + strand, within A4249_RS06655at 1356.604 kb on - strand, within A4249_RS06655at 1356.604 kb on - strand, within A4249_RS06655at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.916 kb on + strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1356.917 kb on - strand, within A4249_RS06660at 1357.072 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.269 kb on + strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.270 kb on - strand, within A4249_RS06660at 1357.300 kb on + strand, within A4249_RS06660at 1357.300 kb on + strand, within A4249_RS06660at 1357.301 kb on - strand, within A4249_RS06660at 1357.301 kb on - strand, within A4249_RS06660at 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.572 kb on + strandat 1357.573 kb on - strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.576 kb on + strandat 1357.577 kb on - strandat 1357.577 kb on - strandat 1357.577 kb on - strandat 1357.577 kb on - strandat 1357.789 kb on + strand, within A4249_RS06665at 1358.078 kb on + strand, within A4249_RS06665at 1358.078 kb on + strand, within A4249_RS06665at 1358.079 kb on - strand, within A4249_RS06665at 1358.079 kb on - strand, within A4249_RS06665at 1358.079 kb on - strand, within A4249_RS06665at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.509 kb on + strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.510 kb on - strand, within A4249_RS06670at 1358.530 kb on - strand, within A4249_RS06670at 1358.618 kb on + strand, within A4249_RS06670at 1358.618 kb on + strand, within A4249_RS06670at 1358.618 kb on + strand, within A4249_RS06670at 1358.619 kb on - strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.755 kb on + strand, within A4249_RS06670at 1358.756 kb on - strand, within A4249_RS06670at 1358.756 kb on - strand, within A4249_RS06670at 1358.756 kb on - strand, within A4249_RS06670at 1358.756 kb on - strand, within A4249_RS06670at 1358.756 kb on - strand, within A4249_RS06670at 1358.756 kb on - strand, within A4249_RS06670at 1358.756 kb on - strand, within A4249_RS06670at 1358.923 kb on + strand, within A4249_RS06670at 1358.938 kb on + strand, within A4249_RS06670at 1358.939 kb on - strand, within A4249_RS06670at 1358.939 kb on - strand, within A4249_RS06670at 1358.976 kb on + strand, within A4249_RS06670at 1358.977 kb on - strand, within A4249_RS06670

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,356,603 + A4249_RS06655 0.75 +0.3
1,356,604 - A4249_RS06655 0.75 +1.1
1,356,604 - A4249_RS06655 0.75 +0.3
1,356,916 + A4249_RS06660 0.16 +0.1
1,356,916 + A4249_RS06660 0.16 -0.5
1,356,916 + A4249_RS06660 0.16 -0.1
1,356,916 + A4249_RS06660 0.16 -0.6
1,356,916 + A4249_RS06660 0.16 -0.1
1,356,916 + A4249_RS06660 0.16 +0.0
1,356,916 + A4249_RS06660 0.16 -0.1
1,356,916 + A4249_RS06660 0.16 -0.5
1,356,916 + A4249_RS06660 0.16 -0.7
1,356,916 + A4249_RS06660 0.16 +0.0
1,356,916 + A4249_RS06660 0.16 +0.2
1,356,916 + A4249_RS06660 0.16 +0.0
1,356,916 + A4249_RS06660 0.16 -0.3
1,356,916 + A4249_RS06660 0.16 -0.4
1,356,916 + A4249_RS06660 0.16 +0.0
1,356,916 + A4249_RS06660 0.16 +0.9
1,356,917 - A4249_RS06660 0.16 -0.3
1,356,917 - A4249_RS06660 0.16 -0.1
1,356,917 - A4249_RS06660 0.16 -0.2
1,356,917 - A4249_RS06660 0.16 -0.2
1,356,917 - A4249_RS06660 0.16 +0.2
1,356,917 - A4249_RS06660 0.16 -1.7
1,356,917 - A4249_RS06660 0.16 -1.6
1,356,917 - A4249_RS06660 0.16 +0.4
1,356,917 - A4249_RS06660 0.16 -0.3
1,356,917 - A4249_RS06660 0.16 +0.1
1,356,917 - A4249_RS06660 0.16 +0.1
1,356,917 - A4249_RS06660 0.16 +0.9
1,356,917 - A4249_RS06660 0.16 -0.3
1,356,917 - A4249_RS06660 0.16 -0.3
1,357,072 + A4249_RS06660 0.39 +0.2
1,357,269 + A4249_RS06660 0.68 +1.6
1,357,269 + A4249_RS06660 0.68 -0.6
1,357,269 + A4249_RS06660 0.68 -0.5
1,357,269 + A4249_RS06660 0.68 -0.2
1,357,269 + A4249_RS06660 0.68 -1.8
1,357,269 + A4249_RS06660 0.68 +0.1
1,357,269 + A4249_RS06660 0.68 +0.1
1,357,269 + A4249_RS06660 0.68 -0.6
1,357,269 + A4249_RS06660 0.68 -0.1
1,357,269 + A4249_RS06660 0.68 +0.6
1,357,270 - A4249_RS06660 0.68 +0.1
1,357,270 - A4249_RS06660 0.68 +0.7
1,357,270 - A4249_RS06660 0.68 +0.1
1,357,270 - A4249_RS06660 0.68 +0.4
1,357,270 - A4249_RS06660 0.68 +0.0
1,357,270 - A4249_RS06660 0.68 -0.6
1,357,270 - A4249_RS06660 0.68 -0.8
1,357,270 - A4249_RS06660 0.68 +0.4
1,357,300 + A4249_RS06660 0.73 -0.3
1,357,300 + A4249_RS06660 0.73 +1.0
1,357,301 - A4249_RS06660 0.73 -0.2
1,357,301 - A4249_RS06660 0.73 -0.1
1,357,572 + -0.9
1,357,572 + +1.9
1,357,572 + -0.6
1,357,572 + +1.5
1,357,572 + +0.3
1,357,572 + +1.0
1,357,572 + -1.5
1,357,573 - +0.5
1,357,576 + +1.1
1,357,576 + -0.9
1,357,576 + +0.6
1,357,576 + +0.3
1,357,576 + -0.5
1,357,576 + -0.1
1,357,576 + +1.1
1,357,577 - -1.2
1,357,577 - -0.8
1,357,577 - +0.4
1,357,577 - +1.9
1,357,789 + A4249_RS06665 0.31 -0.5
1,358,078 + A4249_RS06665 0.70 -0.5
1,358,078 + A4249_RS06665 0.70 -0.9
1,358,079 - A4249_RS06665 0.71 -0.1
1,358,079 - A4249_RS06665 0.71 -1.0
1,358,079 - A4249_RS06665 0.71 -0.7
1,358,509 + A4249_RS06670 0.15 +2.1
1,358,509 + A4249_RS06670 0.15 -1.7
1,358,509 + A4249_RS06670 0.15 +0.6
1,358,509 + A4249_RS06670 0.15 -0.2
1,358,509 + A4249_RS06670 0.15 -0.5
1,358,509 + A4249_RS06670 0.15 -1.0
1,358,509 + A4249_RS06670 0.15 -0.4
1,358,509 + A4249_RS06670 0.15 +1.3
1,358,509 + A4249_RS06670 0.15 +1.4
1,358,509 + A4249_RS06670 0.15 +1.1
1,358,510 - A4249_RS06670 0.16 -0.1
1,358,510 - A4249_RS06670 0.16 +1.1
1,358,510 - A4249_RS06670 0.16 +1.4
1,358,510 - A4249_RS06670 0.16 -0.3
1,358,510 - A4249_RS06670 0.16 -0.8
1,358,510 - A4249_RS06670 0.16 +0.5
1,358,510 - A4249_RS06670 0.16 +1.6
1,358,510 - A4249_RS06670 0.16 +1.5
1,358,510 - A4249_RS06670 0.16 +0.8
1,358,510 - A4249_RS06670 0.16 +0.2
1,358,510 - A4249_RS06670 0.16 +0.6
1,358,510 - A4249_RS06670 0.16 +1.1
1,358,530 - A4249_RS06670 0.17 -0.3
1,358,618 + A4249_RS06670 0.23 +0.8
1,358,618 + A4249_RS06670 0.23 -0.4
1,358,618 + A4249_RS06670 0.23 -0.3
1,358,619 - A4249_RS06670 0.23 -0.1
1,358,755 + A4249_RS06670 0.32 +0.3
1,358,755 + A4249_RS06670 0.32 +0.4
1,358,755 + A4249_RS06670 0.32 +0.2
1,358,755 + A4249_RS06670 0.32 -0.9
1,358,755 + A4249_RS06670 0.32 +1.2
1,358,755 + A4249_RS06670 0.32 +0.5
1,358,755 + A4249_RS06670 0.32 +1.3
1,358,755 + A4249_RS06670 0.32 -0.7
1,358,756 - A4249_RS06670 0.32 +0.7
1,358,756 - A4249_RS06670 0.32 +2.4
1,358,756 - A4249_RS06670 0.32 -0.5
1,358,756 - A4249_RS06670 0.32 +0.1
1,358,756 - A4249_RS06670 0.32 -0.2
1,358,756 - A4249_RS06670 0.32 -0.2
1,358,756 - A4249_RS06670 0.32 -0.0
1,358,923 + A4249_RS06670 0.43 -0.9
1,358,938 + A4249_RS06670 0.44 +0.4
1,358,939 - A4249_RS06670 0.45 +2.9
1,358,939 - A4249_RS06670 0.45 +1.4
1,358,976 + A4249_RS06670 0.47 +0.4
1,358,977 - A4249_RS06670 0.47 +1.5

Or see this region's nucleotide sequence