Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06105

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS06095 and A4249_RS06100 overlap by 4 nucleotidesA4249_RS06100 and A4249_RS06105 overlap by 4 nucleotidesA4249_RS06105 and A4249_RS06110 are separated by 134 nucleotides A4249_RS06095: A4249_RS06095 - patatin-like phospholipase family protein, at 1,238,515 to 1,239,582 _RS06095 A4249_RS06100: A4249_RS06100 - L-threonylcarbamoyladenylate synthase, at 1,239,579 to 1,240,496 _RS06100 A4249_RS06105: A4249_RS06105 - cytochrome b, at 1,240,493 to 1,241,044 _RS06105 A4249_RS06110: A4249_RS06110 - acyl-CoA dehydrogenase, at 1,241,179 to 1,242,963 _RS06110 Position (kb) 1240 1241 1242Strain fitness (log2 ratio) -2 -1 0 1at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.597 kb on - strand, within A4249_RS06105at 1240.940 kb on - strand, within A4249_RS06105at 1240.940 kb on - strand, within A4249_RS06105at 1241.151 kb on + strandat 1241.151 kb on + strandat 1241.152 kb on - strandat 1241.152 kb on - strandat 1241.152 kb on - strandat 1241.152 kb on - strandat 1241.152 kb on - strandat 1241.185 kb on + strandat 1241.186 kb on - strandat 1241.186 kb on - strandat 1241.273 kb on - strandat 1241.374 kb on + strand, within A4249_RS06110at 1241.374 kb on + strand, within A4249_RS06110at 1241.374 kb on + strand, within A4249_RS06110at 1241.374 kb on + strand, within A4249_RS06110at 1241.375 kb on - strand, within A4249_RS06110at 1241.375 kb on - strand, within A4249_RS06110at 1241.375 kb on - strand, within A4249_RS06110at 1241.375 kb on - strand, within A4249_RS06110at 1241.512 kb on + strand, within A4249_RS06110at 1241.512 kb on + strand, within A4249_RS06110at 1241.512 kb on + strand, within A4249_RS06110at 1241.512 kb on + strand, within A4249_RS06110at 1241.512 kb on + strand, within A4249_RS06110at 1241.512 kb on + strand, within A4249_RS06110at 1241.512 kb on + strand, within A4249_RS06110at 1241.513 kb on - strand, within A4249_RS06110at 1241.620 kb on + strand, within A4249_RS06110at 1241.620 kb on + strand, within A4249_RS06110at 1241.621 kb on - strand, within A4249_RS06110at 1241.621 kb on - strand, within A4249_RS06110at 1241.621 kb on - strand, within A4249_RS06110at 1241.621 kb on - strand, within A4249_RS06110at 1241.621 kb on - strand, within A4249_RS06110at 1241.737 kb on + strand, within A4249_RS06110at 1241.737 kb on + strand, within A4249_RS06110at 1241.737 kb on + strand, within A4249_RS06110at 1241.737 kb on + strand, within A4249_RS06110at 1241.737 kb on + strand, within A4249_RS06110at 1241.738 kb on - strand, within A4249_RS06110at 1241.738 kb on - strand, within A4249_RS06110at 1241.738 kb on - strand, within A4249_RS06110at 1241.738 kb on - strand, within A4249_RS06110at 1241.738 kb on - strand, within A4249_RS06110at 1241.738 kb on - strand, within A4249_RS06110at 1241.738 kb on - strand, within A4249_RS06110at 1241.761 kb on + strand, within A4249_RS06110at 1241.761 kb on + strand, within A4249_RS06110at 1241.761 kb on + strand, within A4249_RS06110at 1241.761 kb on + strand, within A4249_RS06110at 1241.761 kb on + strand, within A4249_RS06110at 1241.762 kb on - strand, within A4249_RS06110at 1241.762 kb on - strand, within A4249_RS06110at 1241.762 kb on - strand, within A4249_RS06110at 1241.762 kb on - strand, within A4249_RS06110at 1241.762 kb on - strand, within A4249_RS06110at 1241.762 kb on - strand, within A4249_RS06110at 1241.796 kb on + strand, within A4249_RS06110at 1241.796 kb on + strand, within A4249_RS06110at 1241.797 kb on - strand, within A4249_RS06110at 1241.797 kb on - strand, within A4249_RS06110at 1241.797 kb on - strand, within A4249_RS06110at 1241.797 kb on - strand, within A4249_RS06110at 1241.797 kb on - strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.980 kb on + strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1241.981 kb on - strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.033 kb on + strand, within A4249_RS06110at 1242.034 kb on - strand, within A4249_RS06110at 1242.034 kb on - strand, within A4249_RS06110at 1242.034 kb on - strand, within A4249_RS06110at 1242.034 kb on - strand, within A4249_RS06110at 1242.034 kb on - strand, within A4249_RS06110

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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1,240,597 - A4249_RS06105 0.19 -0.5
1,240,597 - A4249_RS06105 0.19 +0.3
1,240,597 - A4249_RS06105 0.19 -0.3
1,240,597 - A4249_RS06105 0.19 -0.1
1,240,597 - A4249_RS06105 0.19 -1.8
1,240,597 - A4249_RS06105 0.19 +0.6
1,240,597 - A4249_RS06105 0.19 +1.3
1,240,597 - A4249_RS06105 0.19 -1.3
1,240,597 - A4249_RS06105 0.19 -0.4
1,240,940 - A4249_RS06105 0.81 -0.1
1,240,940 - A4249_RS06105 0.81 +0.1
1,241,151 + -0.4
1,241,151 + -0.0
1,241,152 - -0.2
1,241,152 - +0.6
1,241,152 - -0.5
1,241,152 - -0.2
1,241,152 - -0.5
1,241,185 + +0.6
1,241,186 - +0.1
1,241,186 - -0.2
1,241,273 - -1.4
1,241,374 + A4249_RS06110 0.11 +0.7
1,241,374 + A4249_RS06110 0.11 -0.1
1,241,374 + A4249_RS06110 0.11 -0.7
1,241,374 + A4249_RS06110 0.11 +0.8
1,241,375 - A4249_RS06110 0.11 +0.3
1,241,375 - A4249_RS06110 0.11 -0.1
1,241,375 - A4249_RS06110 0.11 +0.2
1,241,375 - A4249_RS06110 0.11 -0.9
1,241,512 + A4249_RS06110 0.19 -0.5
1,241,512 + A4249_RS06110 0.19 -0.6
1,241,512 + A4249_RS06110 0.19 +0.3
1,241,512 + A4249_RS06110 0.19 +1.0
1,241,512 + A4249_RS06110 0.19 +1.7
1,241,512 + A4249_RS06110 0.19 +0.6
1,241,512 + A4249_RS06110 0.19 +0.4
1,241,513 - A4249_RS06110 0.19 +0.6
1,241,620 + A4249_RS06110 0.25 -0.4
1,241,620 + A4249_RS06110 0.25 -0.8
1,241,621 - A4249_RS06110 0.25 +0.7
1,241,621 - A4249_RS06110 0.25 -0.4
1,241,621 - A4249_RS06110 0.25 +0.1
1,241,621 - A4249_RS06110 0.25 +0.4
1,241,621 - A4249_RS06110 0.25 +0.1
1,241,737 + A4249_RS06110 0.31 +0.9
1,241,737 + A4249_RS06110 0.31 -0.6
1,241,737 + A4249_RS06110 0.31 +1.5
1,241,737 + A4249_RS06110 0.31 -1.4
1,241,737 + A4249_RS06110 0.31 -0.1
1,241,738 - A4249_RS06110 0.31 +0.6
1,241,738 - A4249_RS06110 0.31 +1.6
1,241,738 - A4249_RS06110 0.31 +0.7
1,241,738 - A4249_RS06110 0.31 +1.2
1,241,738 - A4249_RS06110 0.31 +1.4
1,241,738 - A4249_RS06110 0.31 +1.2
1,241,738 - A4249_RS06110 0.31 +0.6
1,241,761 + A4249_RS06110 0.33 +1.6
1,241,761 + A4249_RS06110 0.33 +0.2
1,241,761 + A4249_RS06110 0.33 -0.1
1,241,761 + A4249_RS06110 0.33 +1.1
1,241,761 + A4249_RS06110 0.33 -0.1
1,241,762 - A4249_RS06110 0.33 +0.3
1,241,762 - A4249_RS06110 0.33 +0.5
1,241,762 - A4249_RS06110 0.33 -1.2
1,241,762 - A4249_RS06110 0.33 -0.7
1,241,762 - A4249_RS06110 0.33 +1.1
1,241,762 - A4249_RS06110 0.33 +0.1
1,241,796 + A4249_RS06110 0.35 -0.0
1,241,796 + A4249_RS06110 0.35 -0.3
1,241,797 - A4249_RS06110 0.35 +1.0
1,241,797 - A4249_RS06110 0.35 +0.6
1,241,797 - A4249_RS06110 0.35 +1.1
1,241,797 - A4249_RS06110 0.35 -0.3
1,241,797 - A4249_RS06110 0.35 +0.2
1,241,980 + A4249_RS06110 0.45 -0.5
1,241,980 + A4249_RS06110 0.45 +0.3
1,241,980 + A4249_RS06110 0.45 +0.4
1,241,980 + A4249_RS06110 0.45 +0.7
1,241,980 + A4249_RS06110 0.45 -0.2
1,241,980 + A4249_RS06110 0.45 +0.5
1,241,980 + A4249_RS06110 0.45 +0.3
1,241,980 + A4249_RS06110 0.45 +1.4
1,241,980 + A4249_RS06110 0.45 -0.0
1,241,980 + A4249_RS06110 0.45 +0.1
1,241,980 + A4249_RS06110 0.45 +0.1
1,241,980 + A4249_RS06110 0.45 -0.0
1,241,980 + A4249_RS06110 0.45 -0.3
1,241,980 + A4249_RS06110 0.45 +0.3
1,241,980 + A4249_RS06110 0.45 -0.4
1,241,981 - A4249_RS06110 0.45 -0.1
1,241,981 - A4249_RS06110 0.45 +0.2
1,241,981 - A4249_RS06110 0.45 +0.1
1,241,981 - A4249_RS06110 0.45 +0.9
1,241,981 - A4249_RS06110 0.45 -0.3
1,241,981 - A4249_RS06110 0.45 -0.4
1,241,981 - A4249_RS06110 0.45 +0.9
1,241,981 - A4249_RS06110 0.45 -0.9
1,241,981 - A4249_RS06110 0.45 -0.0
1,241,981 - A4249_RS06110 0.45 +0.9
1,241,981 - A4249_RS06110 0.45 +0.0
1,241,981 - A4249_RS06110 0.45 +0.7
1,241,981 - A4249_RS06110 0.45 +0.7
1,241,981 - A4249_RS06110 0.45 -1.7
1,241,981 - A4249_RS06110 0.45 +0.7
1,241,981 - A4249_RS06110 0.45 +0.9
1,241,981 - A4249_RS06110 0.45 +0.7
1,241,981 - A4249_RS06110 0.45 +0.4
1,242,033 + A4249_RS06110 0.48 +1.3
1,242,033 + A4249_RS06110 0.48 +0.5
1,242,033 + A4249_RS06110 0.48 -0.6
1,242,033 + A4249_RS06110 0.48 +1.4
1,242,033 + A4249_RS06110 0.48 +0.9
1,242,033 + A4249_RS06110 0.48 +0.5
1,242,033 + A4249_RS06110 0.48 -2.3
1,242,033 + A4249_RS06110 0.48 +1.3
1,242,034 - A4249_RS06110 0.48 +0.3
1,242,034 - A4249_RS06110 0.48 +0.3
1,242,034 - A4249_RS06110 0.48 -1.3
1,242,034 - A4249_RS06110 0.48 +0.4
1,242,034 - A4249_RS06110 0.48 +0.9

Or see this region's nucleotide sequence