Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS06075

Experiment: Guanine 0.6617 mM (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntA4249_RS06065 and A4249_RS06070 are separated by 3 nucleotidesA4249_RS06070 and A4249_RS06075 are separated by 116 nucleotidesA4249_RS06075 and A4249_RS06080 are separated by 114 nucleotidesA4249_RS06080 and A4249_RS06085 are separated by 75 nucleotides A4249_RS06065: A4249_RS06065 - GNAT family N-acetyltransferase, at 1,233,540 to 1,234,031 _RS06065 A4249_RS06070: A4249_RS06070 - NAD(P)-dependent oxidoreductase, at 1,234,035 to 1,234,895 _RS06070 A4249_RS06075: A4249_RS06075 - flagellar motor protein MotB, at 1,235,012 to 1,235,902 _RS06075 A4249_RS06080: A4249_RS06080 - arginyltransferase, at 1,236,017 to 1,236,754 _RS06080 A4249_RS06085: A4249_RS06085 - peroxide stress protein YaaA, at 1,236,830 to 1,237,600 _RS06085 Position (kb) 1235 1236Strain fitness (log2 ratio) -2 -1 0 1at 1234.029 kb on + strandat 1234.029 kb on + strandat 1234.029 kb on + strandat 1234.030 kb on - strandat 1234.030 kb on - strandat 1234.030 kb on - strandat 1234.111 kb on + strandat 1234.112 kb on - strandat 1234.112 kb on - strandat 1234.112 kb on - strandat 1234.298 kb on - strand, within A4249_RS06070at 1234.298 kb on - strand, within A4249_RS06070at 1234.298 kb on - strand, within A4249_RS06070at 1234.298 kb on - strand, within A4249_RS06070at 1234.350 kb on + strand, within A4249_RS06070at 1234.350 kb on + strand, within A4249_RS06070at 1234.351 kb on - strand, within A4249_RS06070at 1234.424 kb on + strand, within A4249_RS06070at 1234.424 kb on + strand, within A4249_RS06070at 1234.424 kb on + strand, within A4249_RS06070at 1234.424 kb on + strand, within A4249_RS06070at 1234.424 kb on + strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.425 kb on - strand, within A4249_RS06070at 1234.444 kb on + strand, within A4249_RS06070at 1234.444 kb on + strand, within A4249_RS06070at 1234.444 kb on + strand, within A4249_RS06070at 1234.444 kb on + strand, within A4249_RS06070at 1234.445 kb on - strand, within A4249_RS06070at 1234.445 kb on - strand, within A4249_RS06070at 1234.445 kb on - strand, within A4249_RS06070at 1234.619 kb on + strand, within A4249_RS06070at 1234.619 kb on + strand, within A4249_RS06070at 1234.619 kb on + strand, within A4249_RS06070at 1234.620 kb on - strand, within A4249_RS06070at 1234.620 kb on - strand, within A4249_RS06070at 1234.620 kb on - strand, within A4249_RS06070at 1234.802 kb on + strand, within A4249_RS06070at 1234.802 kb on + strand, within A4249_RS06070at 1234.802 kb on + strand, within A4249_RS06070at 1234.802 kb on + strand, within A4249_RS06070at 1234.802 kb on + strand, within A4249_RS06070at 1234.803 kb on - strand, within A4249_RS06070at 1234.964 kb on - strandat 1235.099 kb on + strandat 1235.099 kb on + strandat 1235.099 kb on + strandat 1235.193 kb on - strand, within A4249_RS06075at 1235.810 kb on + strand, within A4249_RS06075at 1235.811 kb on - strand, within A4249_RS06075at 1235.986 kb on + strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1235.987 kb on - strandat 1236.030 kb on + strandat 1236.030 kb on + strandat 1236.030 kb on + strandat 1236.030 kb on + strandat 1236.031 kb on - strandat 1236.031 kb on - strandat 1236.031 kb on - strandat 1236.080 kb on + strandat 1236.081 kb on - strandat 1236.318 kb on + strand, within A4249_RS06080at 1236.318 kb on + strand, within A4249_RS06080at 1236.318 kb on + strand, within A4249_RS06080at 1236.318 kb on + strand, within A4249_RS06080at 1236.319 kb on - strand, within A4249_RS06080at 1236.319 kb on - strand, within A4249_RS06080at 1236.319 kb on - strand, within A4249_RS06080at 1236.363 kb on - strand, within A4249_RS06080at 1236.416 kb on + strand, within A4249_RS06080at 1236.416 kb on + strand, within A4249_RS06080at 1236.416 kb on + strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.417 kb on - strand, within A4249_RS06080at 1236.464 kb on + strand, within A4249_RS06080at 1236.464 kb on + strand, within A4249_RS06080at 1236.511 kb on - strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.551 kb on + strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.552 kb on - strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.560 kb on + strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.561 kb on - strand, within A4249_RS06080at 1236.615 kb on + strand, within A4249_RS06080at 1236.615 kb on + strand, within A4249_RS06080at 1236.615 kb on + strand, within A4249_RS06080at 1236.616 kb on - strand, within A4249_RS06080at 1236.616 kb on - strand, within A4249_RS06080at 1236.616 kb on - strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.650 kb on + strand, within A4249_RS06080at 1236.651 kb on - strand, within A4249_RS06080at 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.689 kb on + strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.690 kb on - strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.799 kb on + strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.800 kb on - strandat 1236.886 kb on + strandat 1236.887 kb on - strandat 1236.887 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
remove
1,234,029 + -1.5
1,234,029 + +0.9
1,234,029 + +0.1
1,234,030 - -0.3
1,234,030 - -1.4
1,234,030 - +0.4
1,234,111 + +0.5
1,234,112 - -0.3
1,234,112 - +0.4
1,234,112 - +0.4
1,234,298 - A4249_RS06070 0.31 -0.1
1,234,298 - A4249_RS06070 0.31 -1.0
1,234,298 - A4249_RS06070 0.31 -0.0
1,234,298 - A4249_RS06070 0.31 -0.7
1,234,350 + A4249_RS06070 0.37 -0.6
1,234,350 + A4249_RS06070 0.37 -0.3
1,234,351 - A4249_RS06070 0.37 +0.6
1,234,424 + A4249_RS06070 0.45 -0.9
1,234,424 + A4249_RS06070 0.45 +0.2
1,234,424 + A4249_RS06070 0.45 +0.7
1,234,424 + A4249_RS06070 0.45 -0.0
1,234,424 + A4249_RS06070 0.45 +0.9
1,234,425 - A4249_RS06070 0.45 +0.3
1,234,425 - A4249_RS06070 0.45 -0.3
1,234,425 - A4249_RS06070 0.45 -0.1
1,234,425 - A4249_RS06070 0.45 +0.6
1,234,425 - A4249_RS06070 0.45 -0.5
1,234,425 - A4249_RS06070 0.45 +0.9
1,234,425 - A4249_RS06070 0.45 -0.5
1,234,425 - A4249_RS06070 0.45 +0.4
1,234,444 + A4249_RS06070 0.48 +0.3
1,234,444 + A4249_RS06070 0.48 -1.9
1,234,444 + A4249_RS06070 0.48 +0.2
1,234,444 + A4249_RS06070 0.48 +0.1
1,234,445 - A4249_RS06070 0.48 -0.0
1,234,445 - A4249_RS06070 0.48 +0.1
1,234,445 - A4249_RS06070 0.48 +1.1
1,234,619 + A4249_RS06070 0.68 -1.5
1,234,619 + A4249_RS06070 0.68 +0.6
1,234,619 + A4249_RS06070 0.68 -1.3
1,234,620 - A4249_RS06070 0.68 -0.1
1,234,620 - A4249_RS06070 0.68 +0.3
1,234,620 - A4249_RS06070 0.68 -0.6
1,234,802 + A4249_RS06070 0.89 +0.5
1,234,802 + A4249_RS06070 0.89 -0.9
1,234,802 + A4249_RS06070 0.89 +1.6
1,234,802 + A4249_RS06070 0.89 +0.5
1,234,802 + A4249_RS06070 0.89 -0.6
1,234,803 - A4249_RS06070 0.89 -0.2
1,234,964 - +0.2
1,235,099 + +0.4
1,235,099 + -0.2
1,235,099 + +1.0
1,235,193 - A4249_RS06075 0.20 -0.0
1,235,810 + A4249_RS06075 0.90 -0.1
1,235,811 - A4249_RS06075 0.90 +1.4
1,235,986 + +1.1
1,235,987 - -0.1
1,235,987 - +0.8
1,235,987 - +0.9
1,235,987 - -0.2
1,235,987 - +0.2
1,235,987 - -0.2
1,235,987 - +0.3
1,236,030 + +0.1
1,236,030 + -0.1
1,236,030 + +0.2
1,236,030 + +0.1
1,236,031 - +0.2
1,236,031 - -0.5
1,236,031 - -0.8
1,236,080 + -1.4
1,236,081 - +0.5
1,236,318 + A4249_RS06080 0.41 +0.8
1,236,318 + A4249_RS06080 0.41 +0.9
1,236,318 + A4249_RS06080 0.41 -0.6
1,236,318 + A4249_RS06080 0.41 -0.3
1,236,319 - A4249_RS06080 0.41 +0.9
1,236,319 - A4249_RS06080 0.41 -0.5
1,236,319 - A4249_RS06080 0.41 -1.2
1,236,363 - A4249_RS06080 0.47 +1.1
1,236,416 + A4249_RS06080 0.54 -0.6
1,236,416 + A4249_RS06080 0.54 -0.7
1,236,416 + A4249_RS06080 0.54 -0.4
1,236,417 - A4249_RS06080 0.54 -0.4
1,236,417 - A4249_RS06080 0.54 +0.0
1,236,417 - A4249_RS06080 0.54 +0.9
1,236,417 - A4249_RS06080 0.54 -0.6
1,236,417 - A4249_RS06080 0.54 +0.3
1,236,464 + A4249_RS06080 0.61 -0.7
1,236,464 + A4249_RS06080 0.61 +0.5
1,236,511 - A4249_RS06080 0.67 -1.1
1,236,551 + A4249_RS06080 0.72 +0.4
1,236,551 + A4249_RS06080 0.72 +0.6
1,236,551 + A4249_RS06080 0.72 -0.2
1,236,551 + A4249_RS06080 0.72 -0.6
1,236,551 + A4249_RS06080 0.72 -0.8
1,236,551 + A4249_RS06080 0.72 -0.3
1,236,551 + A4249_RS06080 0.72 -0.1
1,236,551 + A4249_RS06080 0.72 +0.0
1,236,551 + A4249_RS06080 0.72 -0.6
1,236,552 - A4249_RS06080 0.72 -0.1
1,236,552 - A4249_RS06080 0.72 +0.6
1,236,552 - A4249_RS06080 0.72 -0.1
1,236,552 - A4249_RS06080 0.72 -0.3
1,236,552 - A4249_RS06080 0.72 +1.1
1,236,552 - A4249_RS06080 0.72 +0.1
1,236,560 + A4249_RS06080 0.74 +1.0
1,236,560 + A4249_RS06080 0.74 +0.2
1,236,560 + A4249_RS06080 0.74 +0.0
1,236,560 + A4249_RS06080 0.74 +0.3
1,236,560 + A4249_RS06080 0.74 +0.2
1,236,561 - A4249_RS06080 0.74 +0.2
1,236,561 - A4249_RS06080 0.74 +0.9
1,236,561 - A4249_RS06080 0.74 -0.1
1,236,561 - A4249_RS06080 0.74 -0.3
1,236,561 - A4249_RS06080 0.74 +0.2
1,236,561 - A4249_RS06080 0.74 -0.8
1,236,561 - A4249_RS06080 0.74 +0.7
1,236,561 - A4249_RS06080 0.74 -0.3
1,236,615 + A4249_RS06080 0.81 -0.2
1,236,615 + A4249_RS06080 0.81 -0.3
1,236,615 + A4249_RS06080 0.81 +0.6
1,236,616 - A4249_RS06080 0.81 +0.3
1,236,616 - A4249_RS06080 0.81 +0.2
1,236,616 - A4249_RS06080 0.81 +1.0
1,236,650 + A4249_RS06080 0.86 +0.1
1,236,650 + A4249_RS06080 0.86 +0.8
1,236,650 + A4249_RS06080 0.86 +0.6
1,236,650 + A4249_RS06080 0.86 +0.2
1,236,650 + A4249_RS06080 0.86 +0.1
1,236,651 - A4249_RS06080 0.86 -0.1
1,236,689 + +1.0
1,236,689 + -2.0
1,236,689 + -0.2
1,236,689 + +0.8
1,236,689 + +0.7
1,236,689 + -0.8
1,236,689 + +0.2
1,236,689 + -0.9
1,236,690 - -0.0
1,236,690 - +0.0
1,236,690 - -0.4
1,236,690 - -0.4
1,236,690 - -0.5
1,236,690 - +0.1
1,236,690 - +0.1
1,236,690 - -0.0
1,236,690 - -0.2
1,236,690 - -0.2
1,236,690 - +0.3
1,236,799 + +0.7
1,236,799 + -0.4
1,236,799 + -0.5
1,236,799 + +0.2
1,236,799 + +0.6
1,236,799 + -0.1
1,236,799 + +0.4
1,236,799 + +1.0
1,236,799 + +0.1
1,236,799 + -0.3
1,236,799 + +0.3
1,236,799 + +0.2
1,236,799 + -0.2
1,236,799 + +0.2
1,236,799 + -0.7
1,236,799 + +0.1
1,236,799 + +0.5
1,236,799 + -0.1
1,236,800 - +0.1
1,236,800 - +1.4
1,236,800 - +1.2
1,236,800 - +1.6
1,236,800 - -0.0
1,236,800 - +0.0
1,236,800 - +0.5
1,236,800 - -0.3
1,236,800 - +0.4
1,236,800 - +0.3
1,236,800 - -0.3
1,236,800 - +0.0
1,236,800 - +0.2
1,236,800 - -0.3
1,236,800 - +0.6
1,236,800 - +0.2
1,236,800 - +0.4
1,236,886 + +0.3
1,236,887 - -1.3
1,236,887 - +1.2

Or see this region's nucleotide sequence