Experiment: Guanine 0.6617 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS05470 and A4249_RS05475 are separated by 125 nucleotides A4249_RS05475 and A4249_RS05480 overlap by 1 nucleotides A4249_RS05480 and A4249_RS05485 are separated by 3 nucleotides
A4249_RS05470: A4249_RS05470 - lytic transglycosylase domain-containing protein, at 1,117,950 to 1,120,010
_RS05470
A4249_RS05475: A4249_RS05475 - 4-hydroxy-tetrahydrodipicolinate synthase, at 1,120,136 to 1,121,020
_RS05475
A4249_RS05480: A4249_RS05480 - SsrA-binding protein SmpB, at 1,121,020 to 1,121,493
_RS05480
A4249_RS05485: A4249_RS05485 - uracil-DNA glycosylase, at 1,121,497 to 1,122,135
_RS05485
Position (kb)
1120
1121
1122 Strain fitness (log2 ratio)
-1
0
1
2 at 1119.283 kb on + strand, within A4249_RS05470 at 1119.353 kb on + strand, within A4249_RS05470 at 1119.353 kb on + strand, within A4249_RS05470 at 1119.353 kb on + strand, within A4249_RS05470 at 1119.378 kb on + strand, within A4249_RS05470 at 1119.378 kb on + strand, within A4249_RS05470 at 1119.379 kb on - strand, within A4249_RS05470 at 1119.379 kb on - strand, within A4249_RS05470 at 1119.379 kb on - strand, within A4249_RS05470 at 1119.379 kb on - strand, within A4249_RS05470 at 1119.389 kb on + strand, within A4249_RS05470 at 1119.389 kb on + strand, within A4249_RS05470 at 1119.389 kb on + strand, within A4249_RS05470 at 1119.389 kb on + strand, within A4249_RS05470 at 1119.389 kb on + strand, within A4249_RS05470 at 1119.389 kb on + strand, within A4249_RS05470 at 1119.390 kb on - strand, within A4249_RS05470 at 1119.390 kb on - strand, within A4249_RS05470 at 1119.390 kb on - strand, within A4249_RS05470 at 1119.547 kb on + strand, within A4249_RS05470 at 1119.547 kb on + strand, within A4249_RS05470 at 1119.547 kb on + strand, within A4249_RS05470 at 1119.548 kb on - strand, within A4249_RS05470 at 1119.591 kb on + strand, within A4249_RS05470 at 1119.791 kb on + strand, within A4249_RS05470 at 1119.791 kb on + strand, within A4249_RS05470 at 1119.791 kb on + strand, within A4249_RS05470 at 1119.792 kb on - strand, within A4249_RS05470 at 1119.792 kb on - strand, within A4249_RS05470 at 1119.886 kb on + strand at 1119.886 kb on + strand at 1119.886 kb on + strand at 1119.886 kb on + strand at 1119.886 kb on + strand at 1119.886 kb on + strand at 1119.887 kb on - strand at 1119.887 kb on - strand at 1119.887 kb on - strand at 1119.887 kb on - strand at 1119.887 kb on - strand at 1119.887 kb on - strand at 1119.887 kb on - strand at 1119.887 kb on - strand at 1119.928 kb on + strand at 1119.928 kb on + strand at 1119.945 kb on - strand at 1120.062 kb on + strand at 1120.063 kb on - strand at 1120.063 kb on - strand at 1120.063 kb on - strand at 1120.129 kb on + strand at 1120.129 kb on + strand at 1120.129 kb on + strand at 1120.129 kb on + strand at 1121.591 kb on + strand, within A4249_RS05485 at 1121.592 kb on - strand, within A4249_RS05485 at 1121.592 kb on - strand, within A4249_RS05485 at 1121.609 kb on + strand, within A4249_RS05485 at 1121.873 kb on + strand, within A4249_RS05485 at 1121.907 kb on + strand, within A4249_RS05485 at 1121.913 kb on - strand, within A4249_RS05485 at 1121.913 kb on - strand, within A4249_RS05485 at 1121.913 kb on - strand, within A4249_RS05485
Per-strain Table
Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C) remove 1,119,283 + A4249_RS05470 0.65 +0.0 1,119,353 + A4249_RS05470 0.68 +0.1 1,119,353 + A4249_RS05470 0.68 -0.2 1,119,353 + A4249_RS05470 0.68 -0.3 1,119,378 + A4249_RS05470 0.69 +0.3 1,119,378 + A4249_RS05470 0.69 +0.5 1,119,379 - A4249_RS05470 0.69 -0.1 1,119,379 - A4249_RS05470 0.69 +0.0 1,119,379 - A4249_RS05470 0.69 -0.1 1,119,379 - A4249_RS05470 0.69 +0.0 1,119,389 + A4249_RS05470 0.70 -0.2 1,119,389 + A4249_RS05470 0.70 -0.7 1,119,389 + A4249_RS05470 0.70 -0.1 1,119,389 + A4249_RS05470 0.70 -0.3 1,119,389 + A4249_RS05470 0.70 +0.0 1,119,389 + A4249_RS05470 0.70 +0.2 1,119,390 - A4249_RS05470 0.70 +0.2 1,119,390 - A4249_RS05470 0.70 +0.3 1,119,390 - A4249_RS05470 0.70 +0.1 1,119,547 + A4249_RS05470 0.77 -0.3 1,119,547 + A4249_RS05470 0.77 -0.2 1,119,547 + A4249_RS05470 0.77 +0.1 1,119,548 - A4249_RS05470 0.78 -0.4 1,119,591 + A4249_RS05470 0.80 -0.2 1,119,791 + A4249_RS05470 0.89 -0.3 1,119,791 + A4249_RS05470 0.89 +0.2 1,119,791 + A4249_RS05470 0.89 +0.7 1,119,792 - A4249_RS05470 0.89 +0.7 1,119,792 - A4249_RS05470 0.89 -0.0 1,119,886 + -0.1 1,119,886 + -0.2 1,119,886 + -0.2 1,119,886 + -0.2 1,119,886 + +1.4 1,119,886 + -0.2 1,119,887 - +0.1 1,119,887 - +0.3 1,119,887 - +0.5 1,119,887 - -0.8 1,119,887 - +0.2 1,119,887 - +0.1 1,119,887 - +0.0 1,119,887 - +0.1 1,119,928 + +0.2 1,119,928 + +0.3 1,119,945 - +0.5 1,120,062 + -1.0 1,120,063 - +1.3 1,120,063 - -0.0 1,120,063 - +0.5 1,120,129 + +0.1 1,120,129 + -0.8 1,120,129 + +0.9 1,120,129 + -0.6 1,121,591 + A4249_RS05485 0.15 +0.3 1,121,592 - A4249_RS05485 0.15 -0.7 1,121,592 - A4249_RS05485 0.15 +0.5 1,121,609 + A4249_RS05485 0.18 +2.4 1,121,873 + A4249_RS05485 0.59 -1.3 1,121,907 + A4249_RS05485 0.64 +1.6 1,121,913 - A4249_RS05485 0.65 +0.9 1,121,913 - A4249_RS05485 0.65 -0.4 1,121,913 - A4249_RS05485 0.65 +0.4
Or see this region's nucleotide sequence