Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS04445

Experiment: Guanine 0.6617 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS04440 and A4249_RS04445 are separated by 210 nucleotidesA4249_RS04445 and A4249_RS04450 are separated by 13 nucleotides A4249_RS04440: A4249_RS04440 - MFS transporter, at 922,821 to 924,173 _RS04440 A4249_RS04445: A4249_RS04445 - ubiquinol oxidase subunit II, at 924,384 to 925,613 _RS04445 A4249_RS04450: A4249_RS04450 - cytochrome o ubiquinol oxidase subunit I, at 925,627 to 927,630 _RS04450 Position (kb) 924 925 926Strain fitness (log2 ratio) -2 -1 0 1 2at 923.551 kb on + strand, within A4249_RS04440at 923.665 kb on + strand, within A4249_RS04440at 923.665 kb on + strand, within A4249_RS04440at 923.665 kb on + strand, within A4249_RS04440at 923.666 kb on - strand, within A4249_RS04440at 923.801 kb on - strand, within A4249_RS04440at 923.983 kb on + strand, within A4249_RS04440at 923.983 kb on + strand, within A4249_RS04440at 923.984 kb on - strand, within A4249_RS04440at 924.029 kb on - strand, within A4249_RS04440at 924.200 kb on - strandat 924.203 kb on + strandat 924.203 kb on + strandat 924.203 kb on + strandat 924.213 kb on - strandat 924.230 kb on + strandat 924.230 kb on + strandat 924.230 kb on + strandat 924.231 kb on - strandat 924.231 kb on - strandat 924.272 kb on + strandat 924.272 kb on + strandat 924.272 kb on + strandat 924.272 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.279 kb on + strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.280 kb on - strandat 924.312 kb on + strandat 924.312 kb on + strandat 924.313 kb on - strandat 924.325 kb on - strandat 924.325 kb on - strandat 924.325 kb on - strandat 924.603 kb on + strand, within A4249_RS04445at 924.921 kb on + strand, within A4249_RS04445at 924.921 kb on + strand, within A4249_RS04445at 924.948 kb on + strand, within A4249_RS04445at 925.026 kb on + strand, within A4249_RS04445at 925.332 kb on + strand, within A4249_RS04445at 925.332 kb on + strand, within A4249_RS04445at 925.341 kb on + strand, within A4249_RS04445at 925.341 kb on + strand, within A4249_RS04445at 925.341 kb on + strand, within A4249_RS04445at 925.341 kb on + strand, within A4249_RS04445at 925.341 kb on + strand, within A4249_RS04445at 925.341 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.389 kb on + strand, within A4249_RS04445at 925.459 kb on + strand, within A4249_RS04445at 925.459 kb on + strand, within A4249_RS04445at 925.459 kb on + strand, within A4249_RS04445at 925.459 kb on + strand, within A4249_RS04445at 925.463 kb on + strand, within A4249_RS04445at 925.463 kb on + strand, within A4249_RS04445at 925.834 kb on + strand, within A4249_RS04450at 926.026 kb on + strand, within A4249_RS04450at 926.026 kb on + strand, within A4249_RS04450at 926.170 kb on + strand, within A4249_RS04450at 926.225 kb on + strand, within A4249_RS04450at 926.225 kb on + strand, within A4249_RS04450at 926.363 kb on + strand, within A4249_RS04450at 926.476 kb on + strand, within A4249_RS04450at 926.605 kb on + strand, within A4249_RS04450

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Per-strain Table

Position Strand Gene LocusTag Fraction Guanine 0.6617 mM (C)
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923,551 + A4249_RS04440 0.54 -0.0
923,665 + A4249_RS04440 0.62 -0.8
923,665 + A4249_RS04440 0.62 +0.9
923,665 + A4249_RS04440 0.62 +0.2
923,666 - A4249_RS04440 0.62 +0.2
923,801 - A4249_RS04440 0.72 -0.0
923,983 + A4249_RS04440 0.86 +0.2
923,983 + A4249_RS04440 0.86 +0.2
923,984 - A4249_RS04440 0.86 +1.0
924,029 - A4249_RS04440 0.89 -0.0
924,200 - -0.3
924,203 + +0.0
924,203 + -0.2
924,203 + +0.6
924,213 - +0.8
924,230 + +0.6
924,230 + +0.1
924,230 + +0.5
924,231 - +0.7
924,231 - +0.1
924,272 + -0.0
924,272 + +0.2
924,272 + +0.1
924,272 + +0.6
924,279 + -0.5
924,279 + +0.9
924,279 + +0.0
924,279 + +0.1
924,279 + +0.2
924,279 + +0.3
924,279 + -1.6
924,279 + -0.4
924,279 + +1.1
924,279 + -0.2
924,279 + +0.3
924,279 + +0.6
924,279 + +0.1
924,280 - +1.4
924,280 - -0.6
924,280 - +0.9
924,280 - -0.8
924,280 - +0.8
924,280 - -2.6
924,280 - +1.9
924,280 - -0.8
924,280 - -2.3
924,280 - +1.0
924,280 - +0.1
924,312 + +0.1
924,312 + -0.3
924,313 - +0.9
924,325 - +0.1
924,325 - +0.0
924,325 - +0.6
924,603 + A4249_RS04445 0.18 -0.5
924,921 + A4249_RS04445 0.44 +0.3
924,921 + A4249_RS04445 0.44 -1.1
924,948 + A4249_RS04445 0.46 +0.4
925,026 + A4249_RS04445 0.52 -0.5
925,332 + A4249_RS04445 0.77 -0.1
925,332 + A4249_RS04445 0.77 -0.9
925,341 + A4249_RS04445 0.78 -0.7
925,341 + A4249_RS04445 0.78 -0.1
925,341 + A4249_RS04445 0.78 -0.4
925,341 + A4249_RS04445 0.78 +0.2
925,341 + A4249_RS04445 0.78 +1.2
925,341 + A4249_RS04445 0.78 -0.6
925,389 + A4249_RS04445 0.82 -0.4
925,389 + A4249_RS04445 0.82 -0.1
925,389 + A4249_RS04445 0.82 +0.7
925,389 + A4249_RS04445 0.82 +0.0
925,389 + A4249_RS04445 0.82 +0.1
925,389 + A4249_RS04445 0.82 +0.4
925,389 + A4249_RS04445 0.82 +0.7
925,389 + A4249_RS04445 0.82 +0.2
925,389 + A4249_RS04445 0.82 +1.0
925,459 + A4249_RS04445 0.87 -0.9
925,459 + A4249_RS04445 0.87 -0.2
925,459 + A4249_RS04445 0.87 +0.2
925,459 + A4249_RS04445 0.87 +0.2
925,463 + A4249_RS04445 0.88 +0.7
925,463 + A4249_RS04445 0.88 +0.6
925,834 + A4249_RS04450 0.10 +0.5
926,026 + A4249_RS04450 0.20 +1.5
926,026 + A4249_RS04450 0.20 +0.9
926,170 + A4249_RS04450 0.27 -0.1
926,225 + A4249_RS04450 0.30 -0.1
926,225 + A4249_RS04450 0.30 +0.9
926,363 + A4249_RS04450 0.37 +0.5
926,476 + A4249_RS04450 0.42 +1.9
926,605 + A4249_RS04450 0.49 +0.5

Or see this region's nucleotide sequence